Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1392 and Dshi_1393 are separated by 9 nucleotides Dshi_1393 and Dshi_1394 are separated by 167 nucleotides Dshi_1394 and Dshi_1395 are separated by 59 nucleotides
Dshi_1392: Dshi_1392 - hypothetical protein (RefSeq), at 1,445,056 to 1,445,598
_1392
Dshi_1393: Dshi_1393 - hypothetical protein (RefSeq), at 1,445,608 to 1,446,195
_1393
Dshi_1394: Dshi_1394 - Leucyltransferase (RefSeq), at 1,446,363 to 1,447,034
_1394
Dshi_1395: Dshi_1395 - acetyl-CoA carboxylase, biotin carboxylase (RefSeq), at 1,447,094 to 1,448,440
_1395
Position (kb)
1446
1447
1448 Strain fitness (log2 ratio)
-1
0
1 at 1445.501 kb on - strand, within Dshi_1392 at 1445.511 kb on - strand, within Dshi_1392 at 1445.573 kb on + strand at 1445.600 kb on - strand at 1445.632 kb on + strand at 1445.683 kb on - strand, within Dshi_1393 at 1445.724 kb on + strand, within Dshi_1393 at 1445.816 kb on - strand, within Dshi_1393 at 1445.846 kb on - strand, within Dshi_1393 at 1445.978 kb on - strand, within Dshi_1393 at 1446.025 kb on + strand, within Dshi_1393 at 1446.033 kb on - strand, within Dshi_1393 at 1446.093 kb on - strand, within Dshi_1393 at 1446.158 kb on + strand at 1446.436 kb on - strand, within Dshi_1394 at 1446.459 kb on + strand, within Dshi_1394 at 1446.523 kb on + strand, within Dshi_1394 at 1446.553 kb on - strand, within Dshi_1394 at 1446.553 kb on - strand, within Dshi_1394 at 1446.708 kb on + strand, within Dshi_1394 at 1446.722 kb on - strand, within Dshi_1394 at 1446.826 kb on - strand, within Dshi_1394 at 1447.100 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol% remove 1,445,501 - Dshi_1392 0.82 -0.7 1,445,511 - Dshi_1392 0.84 +0.8 1,445,573 + -1.0 1,445,600 - -0.2 1,445,632 + +0.5 1,445,683 - Dshi_1393 0.13 +1.4 1,445,724 + Dshi_1393 0.20 -0.5 1,445,816 - Dshi_1393 0.35 -0.1 1,445,846 - Dshi_1393 0.40 +1.0 1,445,978 - Dshi_1393 0.63 -1.1 1,446,025 + Dshi_1393 0.71 +0.6 1,446,033 - Dshi_1393 0.72 +1.1 1,446,093 - Dshi_1393 0.82 +0.3 1,446,158 + -1.1 1,446,436 - Dshi_1394 0.11 +0.2 1,446,459 + Dshi_1394 0.14 -1.0 1,446,523 + Dshi_1394 0.24 -1.5 1,446,553 - Dshi_1394 0.28 +0.0 1,446,553 - Dshi_1394 0.28 -0.7 1,446,708 + Dshi_1394 0.51 +0.0 1,446,722 - Dshi_1394 0.53 -1.1 1,446,826 - Dshi_1394 0.69 +0.9 1,447,100 - +1.0
Or see this region's nucleotide sequence