Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0851 and Dshi_R0020 are separated by 192 nucleotides Dshi_R0020 and Dshi_0852 are separated by 71 nucleotides Dshi_0852 and Dshi_0853 are separated by 212 nucleotides
Dshi_0851: Dshi_0851 - protein of unknown function DUF159 (RefSeq), at 862,042 to 862,707
_0851
Dshi_R0020: Dshi_R0020 - tRNA-Gly (RefSeq), at 862,900 to 862,973
_R0020
Dshi_0852: Dshi_0852 - lipid A ABC exporter family, fused ATPase and inner membrane subunits (RefSeq), at 863,045 to 864,853
_0852
Dshi_0853: Dshi_0853 - AMP-dependent synthetase and ligase (RefSeq), at 865,066 to 866,964
_0853
Position (kb) 863
864
865 Strain fitness (log2 ratio) -2
-1
0
1 at 862.140 kb on + strand, within Dshi_0851 at 862.140 kb on - strand, within Dshi_0851 at 862.201 kb on - strand, within Dshi_0851 at 862.215 kb on - strand, within Dshi_0851 at 862.255 kb on + strand, within Dshi_0851 at 862.359 kb on + strand, within Dshi_0851 at 862.367 kb on - strand, within Dshi_0851 at 862.394 kb on + strand, within Dshi_0851 at 862.409 kb on - strand, within Dshi_0851 at 862.425 kb on - strand, within Dshi_0851 at 862.615 kb on + strand, within Dshi_0851 at 863.139 kb on + strand at 863.252 kb on - strand, within Dshi_0852 at 863.268 kb on + strand, within Dshi_0852 at 863.699 kb on + strand, within Dshi_0852 at 863.758 kb on - strand, within Dshi_0852 at 864.668 kb on + strand, within Dshi_0852 at 864.904 kb on - strand at 865.037 kb on + strand at 865.104 kb on + strand at 865.222 kb on + strand at 865.266 kb on + strand, within Dshi_0853 at 865.368 kb on - strand, within Dshi_0853 at 865.368 kb on - strand, within Dshi_0853 at 865.540 kb on + strand, within Dshi_0853 at 865.542 kb on + strand, within Dshi_0853 at 865.554 kb on + strand, within Dshi_0853 at 865.567 kb on - strand, within Dshi_0853 at 865.784 kb on - strand, within Dshi_0853 at 865.814 kb on + strand, within Dshi_0853 at 865.817 kb on - strand, within Dshi_0853 at 865.848 kb on + strand, within Dshi_0853
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol% remove 862,140 + Dshi_0851 0.15 -0.8 862,140 - Dshi_0851 0.15 +0.3 862,201 - Dshi_0851 0.24 -0.4 862,215 - Dshi_0851 0.26 -1.5 862,255 + Dshi_0851 0.32 +0.4 862,359 + Dshi_0851 0.48 +0.8 862,367 - Dshi_0851 0.49 -1.1 862,394 + Dshi_0851 0.53 -2.7 862,409 - Dshi_0851 0.55 +0.1 862,425 - Dshi_0851 0.58 +0.3 862,615 + Dshi_0851 0.86 +0.1 863,139 + -2.0 863,252 - Dshi_0852 0.11 -1.1 863,268 + Dshi_0852 0.12 -2.7 863,699 + Dshi_0852 0.36 -1.6 863,758 - Dshi_0852 0.39 -1.6 864,668 + Dshi_0852 0.90 -1.8 864,904 - +0.5 865,037 + +0.4 865,104 + -0.3 865,222 + -0.5 865,266 + Dshi_0853 0.11 +0.1 865,368 - Dshi_0853 0.16 -0.2 865,368 - Dshi_0853 0.16 +0.1 865,540 + Dshi_0853 0.25 +0.2 865,542 + Dshi_0853 0.25 +0.3 865,554 + Dshi_0853 0.26 -0.1 865,567 - Dshi_0853 0.26 +0.6 865,784 - Dshi_0853 0.38 -0.5 865,814 + Dshi_0853 0.39 +0.6 865,817 - Dshi_0853 0.40 -0.5 865,848 + Dshi_0853 0.41 -0.5
Or see this region's nucleotide sequence