Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0793 and Dshi_0794 are separated by 145 nucleotides Dshi_0794 and Dshi_0795 are separated by 1 nucleotides Dshi_0795 and Dshi_0796 are separated by 190 nucleotides
Dshi_0793: Dshi_0793 - O-acetylhomoserine/O-acetylserine sulfhydrylase (RefSeq), at 800,127 to 801,422
_0793
Dshi_0794: Dshi_0794 - Imidazoleglycerol-phosphate dehydratase (RefSeq), at 801,568 to 802,155
_0794
Dshi_0795: Dshi_0795 - imidazole glycerol phosphate synthase, glutamine amidotransferase subunit (RefSeq), at 802,157 to 802,795
_0795
Dshi_0796: Dshi_0796 - ornithine carbamoyltransferase (RefSeq), at 802,986 to 803,912
_0796
Position (kb) 802
803 Strain fitness (log2 ratio) -1
0
1 at 801.224 kb on + strand, within Dshi_0793 at 801.231 kb on - strand, within Dshi_0793 at 801.306 kb on + strand at 801.314 kb on - strand at 801.381 kb on - strand at 801.397 kb on + strand at 801.425 kb on - strand at 802.803 kb on + strand at 802.826 kb on - strand at 802.878 kb on + strand at 803.137 kb on - strand, within Dshi_0796 at 803.385 kb on - strand, within Dshi_0796 at 803.387 kb on + strand, within Dshi_0796 at 803.410 kb on + strand, within Dshi_0796 at 803.502 kb on - strand, within Dshi_0796 at 803.601 kb on + strand, within Dshi_0796 at 803.781 kb on + strand, within Dshi_0796
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol% remove 801,224 + Dshi_0793 0.85 +1.3 801,231 - Dshi_0793 0.85 +0.0 801,306 + +0.1 801,314 - +0.6 801,381 - -0.0 801,397 + +0.3 801,425 - -1.0 802,803 + +0.8 802,826 - -0.6 802,878 + -0.4 803,137 - Dshi_0796 0.16 -0.2 803,385 - Dshi_0796 0.43 -0.4 803,387 + Dshi_0796 0.43 +0.4 803,410 + Dshi_0796 0.46 -0.8 803,502 - Dshi_0796 0.56 -1.1 803,601 + Dshi_0796 0.66 -0.3 803,781 + Dshi_0796 0.86 +1.4
Or see this region's nucleotide sequence