Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0790 and Dshi_0791 are separated by 122 nucleotides Dshi_0791 and Dshi_0792 are separated by 58 nucleotides Dshi_0792 and Dshi_0793 are separated by 167 nucleotides
Dshi_0790: Dshi_0790 - hypothetical protein (RefSeq), at 796,285 to 798,666
_0790
Dshi_0791: Dshi_0791 - protein of unknown function DUF541 (RefSeq), at 798,789 to 799,526
_0791
Dshi_0792: Dshi_0792 - hypothetical protein (RefSeq), at 799,585 to 799,959
_0792
Dshi_0793: Dshi_0793 - O-acetylhomoserine/O-acetylserine sulfhydrylase (RefSeq), at 800,127 to 801,422
_0793
Position (kb) 798
799
800 Strain fitness (log2 ratio) -1
0
1
2 at 798.010 kb on - strand, within Dshi_0790 at 798.026 kb on + strand, within Dshi_0790 at 798.286 kb on + strand, within Dshi_0790 at 798.289 kb on - strand, within Dshi_0790 at 798.352 kb on - strand, within Dshi_0790 at 798.449 kb on - strand at 798.515 kb on - strand at 798.781 kb on - strand at 798.824 kb on + strand at 798.869 kb on + strand, within Dshi_0791 at 799.180 kb on + strand, within Dshi_0791 at 799.588 kb on + strand at 799.657 kb on - strand, within Dshi_0792 at 800.111 kb on + strand at 800.119 kb on - strand at 800.253 kb on - strand at 800.253 kb on - strand at 800.345 kb on + strand, within Dshi_0793 at 800.382 kb on + strand, within Dshi_0793 at 800.416 kb on + strand, within Dshi_0793 at 800.416 kb on + strand, within Dshi_0793 at 800.416 kb on + strand, within Dshi_0793 at 800.416 kb on + strand, within Dshi_0793 at 800.424 kb on - strand, within Dshi_0793 at 800.424 kb on - strand, within Dshi_0793 at 800.424 kb on - strand, within Dshi_0793 at 800.458 kb on - strand, within Dshi_0793
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol% remove 798,010 - Dshi_0790 0.72 -0.6 798,026 + Dshi_0790 0.73 -0.6 798,286 + Dshi_0790 0.84 +0.2 798,289 - Dshi_0790 0.84 +0.6 798,352 - Dshi_0790 0.87 -0.9 798,449 - -0.0 798,515 - +0.9 798,781 - -1.1 798,824 + -1.7 798,869 + Dshi_0791 0.11 -0.0 799,180 + Dshi_0791 0.53 -1.0 799,588 + +0.2 799,657 - Dshi_0792 0.19 -0.1 800,111 + -0.1 800,119 - -0.1 800,253 - -0.2 800,253 - -0.2 800,345 + Dshi_0793 0.17 -0.1 800,382 + Dshi_0793 0.20 -0.1 800,416 + Dshi_0793 0.22 -0.0 800,416 + Dshi_0793 0.22 -1.0 800,416 + Dshi_0793 0.22 -0.3 800,416 + Dshi_0793 0.22 +0.2 800,424 - Dshi_0793 0.23 +1.8 800,424 - Dshi_0793 0.23 -0.7 800,424 - Dshi_0793 0.23 +0.8 800,458 - Dshi_0793 0.26 +0.4
Or see this region's nucleotide sequence