Experiment: Gallic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04800 and H281DRAFT_04801 are separated by 25 nucleotides H281DRAFT_04801 and H281DRAFT_04802 are separated by 506 nucleotides
H281DRAFT_04800: H281DRAFT_04800 - protein SCO1/2, at 231,611 to 232,255
_04800
H281DRAFT_04801: H281DRAFT_04801 - galactose oxidase, at 232,281 to 234,239
_04801
H281DRAFT_04802: H281DRAFT_04802 - negative transcriptional regulator, PaiB family, at 234,746 to 235,381
_04802
Position (kb) 232
233
234
235 Strain fitness (log2 ratio) -1
0
1 at 231.295 kb on + strand at 231.891 kb on + strand, within H281DRAFT_04800 at 231.892 kb on - strand, within H281DRAFT_04800 at 232.253 kb on + strand at 232.765 kb on + strand, within H281DRAFT_04801 at 232.962 kb on + strand, within H281DRAFT_04801 at 233.031 kb on - strand, within H281DRAFT_04801 at 233.203 kb on + strand, within H281DRAFT_04801 at 233.308 kb on - strand, within H281DRAFT_04801 at 233.308 kb on - strand, within H281DRAFT_04801 at 233.312 kb on - strand, within H281DRAFT_04801 at 233.312 kb on - strand, within H281DRAFT_04801 at 233.808 kb on + strand, within H281DRAFT_04801 at 233.919 kb on + strand, within H281DRAFT_04801 at 233.966 kb on + strand at 233.993 kb on + strand, within H281DRAFT_04801 at 234.114 kb on - strand at 234.175 kb on - strand at 234.297 kb on + strand at 234.448 kb on + strand at 234.487 kb on + strand at 234.497 kb on + strand at 234.583 kb on - strand at 234.929 kb on - strand, within H281DRAFT_04802 at 235.129 kb on + strand, within H281DRAFT_04802 at 235.160 kb on + strand, within H281DRAFT_04802
Per-strain Table
Position Strand Gene LocusTag Fraction Gallic Acid (C) remove 231,295 + +0.3 231,891 + H281DRAFT_04800 0.43 -0.7 231,892 - H281DRAFT_04800 0.44 -0.7 232,253 + +0.2 232,765 + H281DRAFT_04801 0.25 -0.0 232,962 + H281DRAFT_04801 0.35 -0.3 233,031 - H281DRAFT_04801 0.38 +0.5 233,203 + H281DRAFT_04801 0.47 +0.8 233,308 - H281DRAFT_04801 0.52 -0.3 233,308 - H281DRAFT_04801 0.52 +0.3 233,312 - H281DRAFT_04801 0.53 +0.2 233,312 - H281DRAFT_04801 0.53 -1.0 233,808 + H281DRAFT_04801 0.78 +0.1 233,919 + H281DRAFT_04801 0.84 -0.0 233,966 + +0.2 233,993 + H281DRAFT_04801 0.87 +0.5 234,114 - -0.9 234,175 - -0.1 234,297 + +0.5 234,448 + +1.0 234,487 + +0.4 234,497 + +0.5 234,583 - -0.1 234,929 - H281DRAFT_04802 0.29 +0.4 235,129 + H281DRAFT_04802 0.60 +0.2 235,160 + H281DRAFT_04802 0.65 +0.7
Or see this region's nucleotide sequence