Experiment: m.b. Dimethyl Sulfoxide 5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2862 and Dshi_2863 overlap by 4 nucleotides Dshi_2863 and Dshi_2864 are separated by 2 nucleotides Dshi_2864 and Dshi_2865 are separated by 145 nucleotides
Dshi_2862: Dshi_2862 - hypothetical protein (RefSeq), at 3,019,123 to 3,019,902
_2862
Dshi_2863: Dshi_2863 - hypothetical protein (RefSeq), at 3,019,899 to 3,020,720
_2863
Dshi_2864: Dshi_2864 - hypothetical protein (RefSeq), at 3,020,723 to 3,021,550
_2864
Dshi_2865: Dshi_2865 - succinate dehydrogenase, flavoprotein subunit (RefSeq), at 3,021,696 to 3,023,498
_2865
Position (kb)
3020
3021
3022 Strain fitness (log2 ratio)
-1
0
1 at 3019.767 kb on - strand, within Dshi_2862 at 3019.785 kb on - strand, within Dshi_2862 at 3019.808 kb on + strand, within Dshi_2862 at 3019.811 kb on - strand, within Dshi_2862 at 3019.849 kb on - strand at 3019.983 kb on - strand, within Dshi_2863 at 3020.023 kb on + strand, within Dshi_2863 at 3020.031 kb on - strand, within Dshi_2863 at 3020.031 kb on - strand, within Dshi_2863 at 3020.233 kb on + strand, within Dshi_2863 at 3020.287 kb on + strand, within Dshi_2863 at 3020.374 kb on - strand, within Dshi_2863 at 3020.491 kb on + strand, within Dshi_2863 at 3020.499 kb on - strand, within Dshi_2863 at 3020.499 kb on - strand, within Dshi_2863 at 3020.555 kb on + strand, within Dshi_2863 at 3020.592 kb on - strand, within Dshi_2863 at 3020.737 kb on - strand at 3020.747 kb on - strand at 3020.881 kb on + strand, within Dshi_2864 at 3020.966 kb on - strand, within Dshi_2864 at 3021.118 kb on + strand, within Dshi_2864 at 3021.223 kb on - strand, within Dshi_2864 at 3021.429 kb on + strand, within Dshi_2864 at 3021.439 kb on - strand, within Dshi_2864 at 3021.492 kb on - strand at 3021.559 kb on + strand at 3021.559 kb on + strand at 3021.570 kb on + strand at 3021.608 kb on + strand at 3021.613 kb on + strand at 3021.613 kb on + strand at 3021.647 kb on - strand at 3021.666 kb on - strand at 3021.667 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 5 vol% remove 3,019,767 - Dshi_2862 0.83 -0.7 3,019,785 - Dshi_2862 0.85 +0.3 3,019,808 + Dshi_2862 0.88 +0.6 3,019,811 - Dshi_2862 0.88 -0.0 3,019,849 - -0.4 3,019,983 - Dshi_2863 0.10 -0.8 3,020,023 + Dshi_2863 0.15 +0.8 3,020,031 - Dshi_2863 0.16 -1.0 3,020,031 - Dshi_2863 0.16 -0.4 3,020,233 + Dshi_2863 0.41 +0.4 3,020,287 + Dshi_2863 0.47 +0.3 3,020,374 - Dshi_2863 0.58 -0.1 3,020,491 + Dshi_2863 0.72 -1.2 3,020,499 - Dshi_2863 0.73 -0.1 3,020,499 - Dshi_2863 0.73 +0.8 3,020,555 + Dshi_2863 0.80 -0.2 3,020,592 - Dshi_2863 0.84 +0.0 3,020,737 - +0.7 3,020,747 - +1.0 3,020,881 + Dshi_2864 0.19 +0.2 3,020,966 - Dshi_2864 0.29 -0.3 3,021,118 + Dshi_2864 0.48 -0.2 3,021,223 - Dshi_2864 0.60 +0.0 3,021,429 + Dshi_2864 0.85 -0.4 3,021,439 - Dshi_2864 0.86 -0.5 3,021,492 - +0.5 3,021,559 + -0.1 3,021,559 + -0.3 3,021,570 + +0.8 3,021,608 + -0.3 3,021,613 + -0.2 3,021,613 + -0.2 3,021,647 - -0.4 3,021,666 - +1.1 3,021,667 - +0.2
Or see this region's nucleotide sequence