Experiment: m.b. Dimethyl Sulfoxide 5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2712 and Dshi_2713 are separated by 16 nucleotides Dshi_2713 and Dshi_2714 overlap by 4 nucleotides Dshi_2714 and Dshi_2715 are separated by 454 nucleotides
Dshi_2712: Dshi_2712 - Phosphatidylethanolamine N-methyltransferase (RefSeq), at 2,874,084 to 2,874,764
_2712
Dshi_2713: Dshi_2713 - CDP-diacylglycerol--serineO-phosphatidyltransferase (RefSeq), at 2,874,781 to 2,875,530
_2713
Dshi_2714: Dshi_2714 - phosphatidylserine decarboxylase related protein (RefSeq), at 2,875,527 to 2,876,204
_2714
Dshi_2715: Dshi_2715 - DEAD/DEAH box helicase domain protein (RefSeq), at 2,876,659 to 2,877,963
_2715
Position (kb)
2875
2876
2877 Strain fitness (log2 ratio)
-2
-1
0
1 at 2874.534 kb on - strand, within Dshi_2712 at 2874.630 kb on + strand, within Dshi_2712 at 2874.722 kb on - strand at 2874.742 kb on - strand at 2874.794 kb on - strand at 2874.836 kb on - strand at 2874.850 kb on - strand at 2875.009 kb on - strand, within Dshi_2713 at 2875.044 kb on - strand, within Dshi_2713 at 2875.078 kb on - strand, within Dshi_2713 at 2875.157 kb on + strand, within Dshi_2713 at 2875.246 kb on + strand, within Dshi_2713 at 2875.363 kb on + strand, within Dshi_2713 at 2875.433 kb on + strand, within Dshi_2713 at 2875.435 kb on + strand, within Dshi_2713 at 2875.461 kb on + strand at 2875.623 kb on - strand, within Dshi_2714 at 2875.859 kb on + strand, within Dshi_2714 at 2875.926 kb on + strand, within Dshi_2714 at 2875.934 kb on - strand, within Dshi_2714 at 2876.047 kb on - strand, within Dshi_2714 at 2876.092 kb on - strand, within Dshi_2714 at 2876.120 kb on - strand, within Dshi_2714 at 2876.135 kb on - strand, within Dshi_2714 at 2876.180 kb on + strand at 2876.319 kb on + strand at 2876.326 kb on - strand at 2876.351 kb on + strand at 2876.386 kb on - strand at 2876.703 kb on + strand at 2876.733 kb on - strand at 2876.842 kb on + strand, within Dshi_2715 at 2876.847 kb on + strand, within Dshi_2715 at 2876.855 kb on - strand, within Dshi_2715 at 2876.883 kb on - strand, within Dshi_2715 at 2877.030 kb on - strand, within Dshi_2715 at 2877.130 kb on + strand, within Dshi_2715 at 2877.161 kb on - strand, within Dshi_2715
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 5 vol% remove 2,874,534 - Dshi_2712 0.66 -0.7 2,874,630 + Dshi_2712 0.80 +0.1 2,874,722 - -0.3 2,874,742 - +0.3 2,874,794 - -1.0 2,874,836 - +0.1 2,874,850 - +0.7 2,875,009 - Dshi_2713 0.30 -0.3 2,875,044 - Dshi_2713 0.35 +0.5 2,875,078 - Dshi_2713 0.40 -0.3 2,875,157 + Dshi_2713 0.50 -0.5 2,875,246 + Dshi_2713 0.62 +1.6 2,875,363 + Dshi_2713 0.78 -0.3 2,875,433 + Dshi_2713 0.87 -0.4 2,875,435 + Dshi_2713 0.87 -0.5 2,875,461 + +0.6 2,875,623 - Dshi_2714 0.14 +0.4 2,875,859 + Dshi_2714 0.49 +0.6 2,875,926 + Dshi_2714 0.59 -0.9 2,875,934 - Dshi_2714 0.60 -0.4 2,876,047 - Dshi_2714 0.77 -0.4 2,876,092 - Dshi_2714 0.83 -0.3 2,876,120 - Dshi_2714 0.87 +0.5 2,876,135 - Dshi_2714 0.90 -0.2 2,876,180 + +0.7 2,876,319 + +0.1 2,876,326 - +0.2 2,876,351 + +0.1 2,876,386 - +0.4 2,876,703 + -2.0 2,876,733 - -0.3 2,876,842 + Dshi_2715 0.14 -0.6 2,876,847 + Dshi_2715 0.14 +1.1 2,876,855 - Dshi_2715 0.15 +0.4 2,876,883 - Dshi_2715 0.17 -0.4 2,877,030 - Dshi_2715 0.28 +0.7 2,877,130 + Dshi_2715 0.36 -1.0 2,877,161 - Dshi_2715 0.38 +1.2
Or see this region's nucleotide sequence