Experiment: m.b. Dimethyl Sulfoxide 5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0630 and Dshi_0631 are separated by 183 nucleotides Dshi_0631 and Dshi_0632 overlap by 23 nucleotides Dshi_0632 and Dshi_0633 overlap by 4 nucleotides
Dshi_0630: Dshi_0630 - FAD dependent oxidoreductase (RefSeq), at 627,302 to 628,897
_0630
Dshi_0631: Dshi_0631 - transcriptional regulator, DeoR family (RefSeq), at 629,081 to 629,854
_0631
Dshi_0632: Dshi_0632 - acetate kinase (RefSeq), at 629,832 to 630,980
_0632
Dshi_0633: Dshi_0633 - Phosphate butyryltransferase (RefSeq), at 630,977 to 632,392
_0633
Position (kb) 629
630
631 Strain fitness (log2 ratio) -1
0
1 at 629.053 kb on - strand at 629.085 kb on + strand at 629.209 kb on + strand, within Dshi_0631 at 629.332 kb on - strand, within Dshi_0631 at 629.334 kb on + strand, within Dshi_0631 at 629.337 kb on - strand, within Dshi_0631 at 629.382 kb on + strand, within Dshi_0631 at 629.608 kb on - strand, within Dshi_0631 at 629.671 kb on - strand at 629.685 kb on + strand, within Dshi_0631 at 629.685 kb on + strand, within Dshi_0631 at 629.750 kb on + strand, within Dshi_0631 at 629.788 kb on - strand at 629.795 kb on + strand at 629.838 kb on + strand at 630.151 kb on - strand, within Dshi_0632 at 630.199 kb on - strand, within Dshi_0632 at 630.221 kb on + strand, within Dshi_0632 at 630.236 kb on - strand, within Dshi_0632 at 630.363 kb on - strand, within Dshi_0632 at 630.418 kb on - strand, within Dshi_0632 at 630.531 kb on + strand, within Dshi_0632 at 630.724 kb on + strand, within Dshi_0632 at 630.724 kb on + strand, within Dshi_0632 at 630.863 kb on + strand, within Dshi_0632 at 630.868 kb on + strand at 630.882 kb on + strand at 631.209 kb on - strand, within Dshi_0633 at 631.243 kb on - strand, within Dshi_0633 at 631.388 kb on + strand, within Dshi_0633 at 631.388 kb on + strand, within Dshi_0633 at 631.441 kb on - strand, within Dshi_0633 at 631.491 kb on - strand, within Dshi_0633 at 631.494 kb on + strand, within Dshi_0633 at 631.501 kb on - strand, within Dshi_0633 at 631.578 kb on + strand, within Dshi_0633 at 631.647 kb on + strand, within Dshi_0633 at 631.653 kb on + strand, within Dshi_0633 at 631.815 kb on - strand, within Dshi_0633 at 631.876 kb on + strand, within Dshi_0633 at 631.928 kb on - strand, within Dshi_0633
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 5 vol% remove 629,053 - -0.5 629,085 + -1.3 629,209 + Dshi_0631 0.17 -0.3 629,332 - Dshi_0631 0.32 +0.2 629,334 + Dshi_0631 0.33 -1.5 629,337 - Dshi_0631 0.33 +0.8 629,382 + Dshi_0631 0.39 +0.2 629,608 - Dshi_0631 0.68 -0.6 629,671 - +1.3 629,685 + Dshi_0631 0.78 +1.2 629,685 + Dshi_0631 0.78 +0.3 629,750 + Dshi_0631 0.86 -0.4 629,788 - +0.9 629,795 + -0.9 629,838 + +1.3 630,151 - Dshi_0632 0.28 +1.0 630,199 - Dshi_0632 0.32 -0.5 630,221 + Dshi_0632 0.34 -1.0 630,236 - Dshi_0632 0.35 -0.5 630,363 - Dshi_0632 0.46 -1.1 630,418 - Dshi_0632 0.51 +0.0 630,531 + Dshi_0632 0.61 -0.1 630,724 + Dshi_0632 0.78 -0.4 630,724 + Dshi_0632 0.78 -1.2 630,863 + Dshi_0632 0.90 -0.5 630,868 + +0.3 630,882 + +0.6 631,209 - Dshi_0633 0.16 +1.7 631,243 - Dshi_0633 0.19 +0.1 631,388 + Dshi_0633 0.29 -0.3 631,388 + Dshi_0633 0.29 -0.5 631,441 - Dshi_0633 0.33 -0.5 631,491 - Dshi_0633 0.36 +0.9 631,494 + Dshi_0633 0.37 +0.2 631,501 - Dshi_0633 0.37 +0.0 631,578 + Dshi_0633 0.42 +0.3 631,647 + Dshi_0633 0.47 +0.0 631,653 + Dshi_0633 0.48 -0.3 631,815 - Dshi_0633 0.59 -0.0 631,876 + Dshi_0633 0.63 +0.9 631,928 - Dshi_0633 0.67 +0.4
Or see this region's nucleotide sequence