Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03595

Experiment: PYE 25C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 25C
3,747,656	-		CCNA_03593	0.90	+0.2
3,747,656	-		CCNA_03593	0.90	-0.3
3,747,688	+				+0.0
3,747,734	-				+0.4
3,747,816	+				+0.4
3,747,824	-				-0.4
3,747,849	-				-0.2
3,747,902	+				-0.2
3,747,903	-				-1.0
3,747,918	-				-1.3
3,747,977	-				-2.0
3,747,977	-				+0.8
3,747,978	+				-0.5
3,747,979	+				+0.3
3,747,986	-				+1.4
3,748,044	+		CCNA_03594	0.17	+0.3
3,748,044	+		CCNA_03594	0.17	+0.3
3,748,044	+		CCNA_03594	0.17	-1.5
3,748,044	+		CCNA_03594	0.17	+1.5
3,748,044	+		CCNA_03594	0.17	-1.0
3,748,052	-		CCNA_03594	0.18	-0.5
3,748,052	-		CCNA_03594	0.18	-1.2
3,748,052	-		CCNA_03594	0.18	+0.8
3,748,052	-		CCNA_03594	0.18	+0.6
3,748,071	-		CCNA_03594	0.21	+0.8
3,748,071	-		CCNA_03594	0.21	+1.3
3,748,090	-		CCNA_03594	0.24	-1.5
3,748,121	+		CCNA_03594	0.28	+0.2
3,748,121	+		CCNA_03594	0.28	+0.9
3,748,129	-		CCNA_03594	0.29	-1.8
3,748,129	-		CCNA_03594	0.29	+0.1
3,748,148	-		CCNA_03594	0.32	+0.6
3,748,149	-		CCNA_03594	0.32	+0.6
3,748,159	-		CCNA_03594	0.33	+1.3
3,748,159	-		CCNA_03594	0.33	-1.2
3,748,159	-		CCNA_03594	0.33	+0.8
3,748,203	-		CCNA_03594	0.39	-0.7
3,748,276	+		CCNA_03594	0.50	+0.0
3,748,322	+		CCNA_03594	0.56	-0.6
3,748,322	+		CCNA_03594	0.56	-0.5
3,748,339	-		CCNA_03594	0.58	-0.4
3,748,367	+		CCNA_03594	0.62	-0.6
3,748,370	-		CCNA_03594	0.63	+0.1
3,748,375	-		CCNA_03594	0.63	-0.1
3,748,381	+		CCNA_03594	0.64	+0.2
3,748,459	+		CCNA_03594	0.75	+0.3
3,748,467	-		CCNA_03594	0.76	-0.1
3,748,502	-		CCNA_03594	0.81	+0.8
3,748,528	+		CCNA_03594	0.85	-0.4
3,748,542	-		CCNA_03594	0.87	-0.3
3,748,563	-		CCNA_03594	0.90	-0.3
3,748,574	+				+0.8
3,748,575	+				+1.1
3,748,577	+				+1.8
3,748,583	-				+0.4
3,748,583	-				+0.8
3,748,588	+				-1.1
3,748,599	+				-1.4
3,748,604	+				-0.9
3,748,607	-				-0.7
3,748,617	-				+0.6
3,748,631	+				-1.5
3,748,631	+				-0.1
3,748,631	+				+0.7
3,748,631	+				-0.6
3,748,631	+				+0.8
3,748,639	-				-0.7
3,748,639	-				-0.9
3,748,639	-				+0.7
3,748,639	-				-0.7
3,748,639	-				+2.8
3,748,639	-				+0.3
3,748,639	-				-0.9
3,748,639	-				-0.5
3,748,639	-				+1.8
3,748,640	-				+0.4
3,748,640	-				+0.1
3,748,665	-				-0.5
3,748,665	-				-0.6
3,748,665	-				+0.1
3,748,667	+				+1.0
3,748,667	+				+2.1
3,748,667	+				+0.0
3,748,667	+				+0.1
3,748,670	-				-1.0
3,748,675	-				-0.7
3,748,675	-				-1.0
3,748,697	+				-0.0
3,748,710	-		CCNA_03595	0.12	+0.1
3,748,710	-		CCNA_03595	0.12	-0.1
3,748,710	-		CCNA_03595	0.12	-0.4
3,748,719	-		CCNA_03595	0.13	-0.9
3,748,757	+		CCNA_03595	0.19	+0.2
3,748,762	+		CCNA_03595	0.20	-0.0
3,748,770	-		CCNA_03595	0.21	-0.2
3,748,812	-		CCNA_03595	0.28	-1.9
3,748,840	+		CCNA_03595	0.32	-2.2
3,748,913	-		CCNA_03595	0.43	-0.2
3,748,920	+		CCNA_03595	0.44	+0.6
3,748,930	+		CCNA_03595	0.46	+0.5
3,748,930	+		CCNA_03595	0.46	-0.4
3,748,930	+		CCNA_03595	0.46	-0.1
3,748,930	+		CCNA_03595	0.46	-0.3
3,748,930	+		CCNA_03595	0.46	-1.5
3,748,938	-		CCNA_03595	0.47	+0.7
3,748,938	-		CCNA_03595	0.47	-0.3
3,748,940	+		CCNA_03595	0.47	+1.8
3,748,945	+		CCNA_03595	0.48	-1.0
3,748,945	+		CCNA_03595	0.48	+0.4
3,748,946	-		CCNA_03595	0.48	-0.4
3,748,948	-		CCNA_03595	0.49	-0.1
3,748,958	-		CCNA_03595	0.50	+0.3
3,748,973	+		CCNA_03595	0.53	-1.9
3,748,997	-		CCNA_03595	0.56	-0.1
3,749,007	-		CCNA_03595	0.58	-0.4
3,749,033	-		CCNA_03595	0.62	-0.3
3,749,035	+		CCNA_03595	0.62	-1.0
3,749,053	+		CCNA_03595	0.65	+0.5
3,749,061	-		CCNA_03595	0.66	-0.2
3,749,066	+		CCNA_03595	0.67	-0.3
3,749,074	-		CCNA_03595	0.68	-0.2
3,749,074	-		CCNA_03595	0.68	+1.1
3,749,083	+		CCNA_03595	0.70	-0.7
3,749,096	-		CCNA_03595	0.72	-0.3
3,749,098	+		CCNA_03595	0.72	-0.4
3,749,106	-		CCNA_03595	0.73	-1.5
3,749,114	+		CCNA_03595	0.74	+2.8
3,749,122	-		CCNA_03595	0.76	-0.6
3,749,122	-		CCNA_03595	0.76	-0.5
3,749,122	-		CCNA_03595	0.76	+0.3
3,749,127	-		CCNA_03595	0.76	+0.1
3,749,208	+		CCNA_03595	0.89	-0.2
3,749,211	+		CCNA_03595	0.89	-2.2
3,749,219	-				+0.1
3,749,265	-				+0.1
3,749,268	+				-0.1
3,749,273	+				-0.3
3,749,282	-				-0.1
3,749,282	-				-0.4
3,749,282	-				+0.1
3,749,303	-				-0.2
3,749,309	-				+0.4
3,749,319	+				-0.5
3,749,326	-				-0.8
3,749,350	-				+1.0
3,749,403	-		CCNA_03596	0.20	-0.0
3,749,411	+		CCNA_03596	0.22	-0.5
3,749,419	-		CCNA_03596	0.24	-0.2
3,749,440	-		CCNA_03596	0.29	-0.2
3,749,441	+		CCNA_03596	0.29	+3.4
3,749,475	+		CCNA_03596	0.38	-0.6
3,749,485	-		CCNA_03596	0.40	-0.1
3,749,530	-		CCNA_03596	0.51	+0.8
3,749,530	-		CCNA_03596	0.51	+0.3
3,749,531	+		CCNA_03596	0.51	+0.0
3,749,532	+		CCNA_03596	0.52	+0.6
3,749,540	-		CCNA_03596	0.54	+0.2
3,749,564	-		CCNA_03596	0.60	+0.3
3,749,566	+		CCNA_03596	0.60	+0.8
3,749,571	+		CCNA_03596	0.61	+0.1
3,749,571	+		CCNA_03596	0.61	+0.3
3,749,571	+		CCNA_03596	0.61	+1.5
3,749,571	+		CCNA_03596	0.61	-1.3
3,749,571	+		CCNA_03596	0.61	-0.2
3,749,571	+		CCNA_03596	0.61	+0.3
3,749,571	+		CCNA_03596	0.61	-0.2
3,749,571	+		CCNA_03596	0.61	-1.2
3,749,571	+		CCNA_03596	0.61	+0.4
3,749,571	+		CCNA_03596	0.61	+0.1
3,749,571	+		CCNA_03596	0.61	-0.2
3,749,571	+		CCNA_03596	0.61	+0.4
3,749,571	+		CCNA_03596	0.61	-0.1
3,749,571	+		CCNA_03596	0.61	-0.2
3,749,571	+		CCNA_03596	0.61	-0.3
3,749,571	+		CCNA_03596	0.61	+0.0
3,749,571	+		CCNA_03596	0.61	-0.2
3,749,579	-		CCNA_03596	0.63	+0.8
3,749,579	-		CCNA_03596	0.63	-0.3
3,749,579	-		CCNA_03596	0.63	+0.1
3,749,579	-		CCNA_03596	0.63	+0.2
3,749,579	-		CCNA_03596	0.63	-0.1
3,749,579	-				+1.8
3,749,579	-		CCNA_03596	0.63	-0.6
3,749,579	-		CCNA_03596	0.63	-0.3
3,749,579	-		CCNA_03596	0.63	+0.6
3,749,579	-		CCNA_03596	0.63	-0.1
3,749,579	-		CCNA_03596	0.63	+0.3
3,749,579	-		CCNA_03596	0.63	-0.5
3,749,579	-		CCNA_03596	0.63	+0.0
3,749,579	-		CCNA_03596	0.63	+1.3
3,749,579	-		CCNA_03596	0.63	-0.5
3,749,579	-		CCNA_03596	0.63	+0.0
3,749,579	-		CCNA_03596	0.63	+0.3
3,749,603	+		CCNA_03596	0.69	-1.4
3,749,607	-		CCNA_03596	0.70	+0.4
3,749,654	+		CCNA_03596	0.82	+0.8
3,749,656	-		CCNA_03596	0.82	+0.1
3,749,670	+		CCNA_03596	0.86	+0.8
3,749,679	-		CCNA_03596	0.88	-0.6
3,749,712	+				+0.8
3,749,796	+		CCNA_03597	0.18	+0.8
3,749,840	+		CCNA_03597	0.29	+0.3
3,749,886	+		CCNA_03597	0.40	+0.8
3,749,899	+		CCNA_03597	0.43	+1.8
3,749,899	-		CCNA_03597	0.43	-0.0
3,749,907	-		CCNA_03597	0.45	-0.7
3,749,917	+		CCNA_03597	0.48	+0.8
3,749,917	+		CCNA_03597	0.48	+0.3
3,749,922	+		CCNA_03597	0.49	+1.8
3,749,925	-		CCNA_03597	0.50	-0.5
3,749,925	-		CCNA_03597	0.50	+0.4
3,749,930	+		CCNA_03597	0.51	+0.7
3,749,938	-		CCNA_03597	0.53	-2.4
3,749,942	-		CCNA_03597	0.54	+1.4
3,749,957	-		CCNA_03597	0.58	+0.1
3,749,957	-		CCNA_03597	0.58	-0.4
3,749,985	-		CCNA_03597	0.65	+0.8
3,749,985	-		CCNA_03597	0.65	-0.1
3,749,993	-		CCNA_03597	0.67	+0.8
3,750,065	-		CCNA_03597	0.85	+0.3
3,750,073	+		CCNA_03597	0.87	+0.3
3,750,086	-				+1.3
3,750,111	+				+1.8
3,750,116	+				-1.2
3,750,130	-				-0.5
3,750,137	-				+0.4