Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24510 and BWI76_RS24515 are separated by 9 nucleotides BWI76_RS24515 and BWI76_RS24520 are separated by 0 nucleotides BWI76_RS24520 and BWI76_RS24525 are separated by 8 nucleotides BWI76_RS24525 and BWI76_RS24530 are separated by 151 nucleotides
BWI76_RS24510: BWI76_RS24510 - urease subunit alpha, at 5,109,639 to 5,111,342
_RS24510
BWI76_RS24515: BWI76_RS24515 - urease accessory protein UreE, at 5,111,352 to 5,111,822
_RS24515
BWI76_RS24520: BWI76_RS24520 - urease accessory protein UreF, at 5,111,823 to 5,112,497
_RS24520
BWI76_RS24525: BWI76_RS24525 - urease accessory protein UreG, at 5,112,506 to 5,113,123
_RS24525
BWI76_RS24530: BWI76_RS24530 - cytosine/purines uracil thiamine allantoin permease, at 5,113,275 to 5,114,882
_RS24530
Position (kb)
5111
5112
5113 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 5110.837 kb on - strand, within BWI76_RS24510 at 5110.841 kb on + strand, within BWI76_RS24510 at 5110.883 kb on + strand, within BWI76_RS24510 at 5111.026 kb on + strand, within BWI76_RS24510 at 5111.049 kb on + strand, within BWI76_RS24510 at 5111.100 kb on + strand, within BWI76_RS24510 at 5111.154 kb on + strand, within BWI76_RS24510 at 5111.162 kb on - strand, within BWI76_RS24510 at 5111.265 kb on - strand at 5111.344 kb on - strand at 5111.401 kb on + strand, within BWI76_RS24515 at 5111.401 kb on + strand, within BWI76_RS24515 at 5111.409 kb on - strand, within BWI76_RS24515 at 5111.577 kb on + strand, within BWI76_RS24515 at 5111.604 kb on - strand, within BWI76_RS24515 at 5111.617 kb on + strand, within BWI76_RS24515 at 5111.617 kb on + strand, within BWI76_RS24515 at 5111.794 kb on + strand at 5111.940 kb on - strand, within BWI76_RS24520 at 5112.028 kb on - strand, within BWI76_RS24520 at 5112.135 kb on + strand, within BWI76_RS24520 at 5112.143 kb on - strand, within BWI76_RS24520 at 5112.392 kb on - strand, within BWI76_RS24520 at 5112.511 kb on - strand at 5112.582 kb on - strand, within BWI76_RS24525 at 5112.586 kb on + strand, within BWI76_RS24525 at 5112.594 kb on - strand, within BWI76_RS24525 at 5112.687 kb on - strand, within BWI76_RS24525 at 5112.857 kb on - strand, within BWI76_RS24525 at 5113.124 kb on + strand at 5113.124 kb on + strand at 5113.140 kb on + strand at 5113.140 kb on + strand at 5113.234 kb on - strand at 5113.241 kb on + strand at 5113.313 kb on + strand at 5113.329 kb on - strand at 5113.348 kb on + strand at 5113.356 kb on - strand at 5113.392 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 5,110,837 - BWI76_RS24510 0.70 -0.6 5,110,841 + BWI76_RS24510 0.71 -0.2 5,110,883 + BWI76_RS24510 0.73 +2.2 5,111,026 + BWI76_RS24510 0.81 +0.2 5,111,049 + BWI76_RS24510 0.83 +0.1 5,111,100 + BWI76_RS24510 0.86 +0.9 5,111,154 + BWI76_RS24510 0.89 -1.1 5,111,162 - BWI76_RS24510 0.89 +0.1 5,111,265 - -1.8 5,111,344 - -0.9 5,111,401 + BWI76_RS24515 0.10 +0.5 5,111,401 + BWI76_RS24515 0.10 +0.0 5,111,409 - BWI76_RS24515 0.12 -1.3 5,111,577 + BWI76_RS24515 0.48 +0.2 5,111,604 - BWI76_RS24515 0.54 +0.1 5,111,617 + BWI76_RS24515 0.56 -1.1 5,111,617 + BWI76_RS24515 0.56 +0.5 5,111,794 + +1.3 5,111,940 - BWI76_RS24520 0.17 +0.3 5,112,028 - BWI76_RS24520 0.30 -1.2 5,112,135 + BWI76_RS24520 0.46 -0.2 5,112,143 - BWI76_RS24520 0.47 -0.6 5,112,392 - BWI76_RS24520 0.84 -2.0 5,112,511 - -1.7 5,112,582 - BWI76_RS24525 0.12 +0.0 5,112,586 + BWI76_RS24525 0.13 +0.2 5,112,594 - BWI76_RS24525 0.14 +0.3 5,112,687 - BWI76_RS24525 0.29 +0.3 5,112,857 - BWI76_RS24525 0.57 -2.5 5,113,124 + -0.0 5,113,124 + +0.4 5,113,140 + -1.0 5,113,140 + -0.4 5,113,234 - -0.4 5,113,241 + +0.7 5,113,313 + -1.3 5,113,329 - -1.1 5,113,348 + +3.1 5,113,356 - +0.6 5,113,392 - +0.1
Or see this region's nucleotide sequence