Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS17815 and BWI76_RS17820 are separated by 132 nucleotides BWI76_RS17820 and BWI76_RS17825 are separated by 164 nucleotides BWI76_RS17825 and BWI76_RS17830 are separated by 7 nucleotides
BWI76_RS17815: BWI76_RS17815 - ATP-dependent helicase, at 3,702,414 to 3,704,324
_RS17815
BWI76_RS17820: BWI76_RS17820 - hypothetical protein, at 3,704,457 to 3,704,801
_RS17820
BWI76_RS17825: BWI76_RS17825 - alginate lyase, at 3,704,966 to 3,706,105
_RS17825
BWI76_RS17830: BWI76_RS17830 - ABC transporter ATP-binding protein, at 3,706,113 to 3,707,207
_RS17830
Position (kb)
3704
3705
3706
3707 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3703.980 kb on - strand, within BWI76_RS17815 at 3703.993 kb on - strand, within BWI76_RS17815 at 3703.993 kb on - strand, within BWI76_RS17815 at 3704.266 kb on + strand at 3704.530 kb on - strand, within BWI76_RS17820 at 3704.724 kb on + strand, within BWI76_RS17820 at 3704.796 kb on + strand at 3704.796 kb on + strand at 3704.804 kb on - strand at 3704.804 kb on - strand at 3704.828 kb on - strand at 3705.108 kb on + strand, within BWI76_RS17825 at 3705.136 kb on - strand, within BWI76_RS17825 at 3705.520 kb on + strand, within BWI76_RS17825 at 3705.763 kb on - strand, within BWI76_RS17825 at 3705.780 kb on - strand, within BWI76_RS17825 at 3705.861 kb on + strand, within BWI76_RS17825 at 3705.939 kb on - strand, within BWI76_RS17825 at 3706.011 kb on + strand at 3706.035 kb on + strand at 3706.272 kb on - strand, within BWI76_RS17830 at 3706.345 kb on + strand, within BWI76_RS17830 at 3706.353 kb on - strand, within BWI76_RS17830 at 3706.355 kb on + strand, within BWI76_RS17830 at 3706.377 kb on - strand, within BWI76_RS17830 at 3706.647 kb on - strand, within BWI76_RS17830 at 3706.665 kb on + strand, within BWI76_RS17830 at 3706.885 kb on + strand, within BWI76_RS17830 at 3706.913 kb on - strand, within BWI76_RS17830 at 3706.996 kb on - strand, within BWI76_RS17830
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 3,703,980 - BWI76_RS17815 0.82 -0.6 3,703,993 - BWI76_RS17815 0.83 +0.3 3,703,993 - BWI76_RS17815 0.83 -0.9 3,704,266 + -0.7 3,704,530 - BWI76_RS17820 0.21 +0.7 3,704,724 + BWI76_RS17820 0.77 -0.2 3,704,796 + +0.6 3,704,796 + -0.4 3,704,804 - +0.5 3,704,804 - +0.5 3,704,828 - -0.9 3,705,108 + BWI76_RS17825 0.12 -0.0 3,705,136 - BWI76_RS17825 0.15 +0.3 3,705,520 + BWI76_RS17825 0.49 +0.4 3,705,763 - BWI76_RS17825 0.70 -1.2 3,705,780 - BWI76_RS17825 0.71 +0.1 3,705,861 + BWI76_RS17825 0.79 +0.5 3,705,939 - BWI76_RS17825 0.85 -0.0 3,706,011 + -0.4 3,706,035 + -3.3 3,706,272 - BWI76_RS17830 0.15 +0.8 3,706,345 + BWI76_RS17830 0.21 +2.2 3,706,353 - BWI76_RS17830 0.22 -0.8 3,706,355 + BWI76_RS17830 0.22 -0.0 3,706,377 - BWI76_RS17830 0.24 -0.7 3,706,647 - BWI76_RS17830 0.49 -1.6 3,706,665 + BWI76_RS17830 0.50 -1.1 3,706,885 + BWI76_RS17830 0.71 -0.5 3,706,913 - BWI76_RS17830 0.73 -0.3 3,706,996 - BWI76_RS17830 0.81 +0.7
Or see this region's nucleotide sequence