Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS12525 and BWI76_RS12530 are separated by 57 nucleotides BWI76_RS12530 and BWI76_RS12535 are separated by 412 nucleotides BWI76_RS12535 and BWI76_RS12540 are separated by 262 nucleotides
BWI76_RS12525: BWI76_RS12525 - beta-1,4-xylosidase, at 2,615,497 to 2,617,176
_RS12525
BWI76_RS12530: BWI76_RS12530 - sugar (glycoside-Pentoside-Hexuronide) transporter, at 2,617,234 to 2,618,688
_RS12530
BWI76_RS12535: BWI76_RS12535 - hypothetical protein, at 2,619,101 to 2,619,304
_RS12535
BWI76_RS12540: BWI76_RS12540 - maltoporin, at 2,619,567 to 2,620,943
_RS12540
Position (kb)
2617
2618
2619 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 2616.259 kb on - strand, within BWI76_RS12525 at 2616.323 kb on - strand, within BWI76_RS12525 at 2616.343 kb on - strand, within BWI76_RS12525 at 2616.353 kb on - strand, within BWI76_RS12525 at 2616.384 kb on - strand, within BWI76_RS12525 at 2616.475 kb on - strand, within BWI76_RS12525 at 2616.514 kb on + strand, within BWI76_RS12525 at 2616.523 kb on - strand, within BWI76_RS12525 at 2616.619 kb on - strand, within BWI76_RS12525 at 2616.702 kb on - strand, within BWI76_RS12525 at 2616.744 kb on - strand, within BWI76_RS12525 at 2616.776 kb on - strand, within BWI76_RS12525 at 2616.793 kb on + strand, within BWI76_RS12525 at 2616.801 kb on - strand, within BWI76_RS12525 at 2616.806 kb on + strand, within BWI76_RS12525 at 2616.814 kb on - strand, within BWI76_RS12525 at 2616.907 kb on + strand, within BWI76_RS12525 at 2616.907 kb on + strand, within BWI76_RS12525 at 2616.915 kb on - strand, within BWI76_RS12525 at 2616.916 kb on - strand, within BWI76_RS12525 at 2616.933 kb on + strand, within BWI76_RS12525 at 2616.961 kb on - strand, within BWI76_RS12525 at 2617.067 kb on + strand at 2617.075 kb on - strand at 2617.187 kb on - strand at 2617.187 kb on - strand at 2617.239 kb on + strand at 2617.261 kb on + strand at 2617.300 kb on - strand at 2617.325 kb on - strand at 2617.337 kb on + strand at 2617.547 kb on - strand, within BWI76_RS12530 at 2617.565 kb on - strand, within BWI76_RS12530 at 2617.566 kb on - strand, within BWI76_RS12530 at 2617.590 kb on + strand at 2617.590 kb on + strand, within BWI76_RS12530 at 2617.598 kb on - strand, within BWI76_RS12530 at 2617.598 kb on - strand, within BWI76_RS12530 at 2617.631 kb on - strand, within BWI76_RS12530 at 2617.638 kb on - strand, within BWI76_RS12530 at 2617.649 kb on - strand, within BWI76_RS12530 at 2617.787 kb on + strand, within BWI76_RS12530 at 2617.787 kb on + strand, within BWI76_RS12530 at 2617.800 kb on - strand, within BWI76_RS12530 at 2617.815 kb on - strand, within BWI76_RS12530 at 2617.831 kb on + strand, within BWI76_RS12530 at 2617.839 kb on - strand at 2617.889 kb on + strand, within BWI76_RS12530 at 2617.937 kb on + strand, within BWI76_RS12530 at 2617.956 kb on + strand, within BWI76_RS12530 at 2617.964 kb on - strand, within BWI76_RS12530 at 2617.964 kb on - strand, within BWI76_RS12530 at 2617.997 kb on - strand, within BWI76_RS12530 at 2618.015 kb on + strand, within BWI76_RS12530 at 2618.118 kb on + strand, within BWI76_RS12530 at 2618.126 kb on - strand, within BWI76_RS12530 at 2618.126 kb on - strand, within BWI76_RS12530 at 2618.169 kb on + strand, within BWI76_RS12530 at 2618.169 kb on + strand, within BWI76_RS12530 at 2618.169 kb on + strand, within BWI76_RS12530 at 2618.169 kb on + strand, within BWI76_RS12530 at 2618.185 kb on - strand, within BWI76_RS12530 at 2618.192 kb on + strand, within BWI76_RS12530 at 2618.197 kb on + strand, within BWI76_RS12530 at 2618.200 kb on - strand, within BWI76_RS12530 at 2618.248 kb on + strand, within BWI76_RS12530 at 2618.349 kb on + strand, within BWI76_RS12530 at 2618.357 kb on - strand, within BWI76_RS12530 at 2618.397 kb on + strand, within BWI76_RS12530 at 2618.405 kb on - strand, within BWI76_RS12530 at 2618.405 kb on - strand, within BWI76_RS12530 at 2618.413 kb on - strand, within BWI76_RS12530 at 2618.454 kb on + strand, within BWI76_RS12530 at 2618.531 kb on - strand, within BWI76_RS12530 at 2618.541 kb on - strand, within BWI76_RS12530 at 2618.687 kb on + strand at 2618.695 kb on - strand at 2618.706 kb on + strand at 2618.709 kb on - strand at 2618.709 kb on - strand at 2618.711 kb on - strand at 2618.714 kb on - strand at 2618.714 kb on - strand at 2618.714 kb on - strand at 2618.826 kb on - strand at 2618.869 kb on - strand at 2618.869 kb on - strand at 2618.869 kb on - strand at 2618.998 kb on + strand at 2618.998 kb on + strand at 2618.998 kb on + strand at 2619.006 kb on - strand at 2619.056 kb on + strand at 2619.064 kb on - strand at 2619.118 kb on + strand at 2619.118 kb on + strand at 2619.118 kb on + strand at 2619.118 kb on + strand at 2619.118 kb on + strand at 2619.118 kb on + strand at 2619.118 kb on + strand at 2619.118 kb on + strand at 2619.118 kb on + strand at 2619.118 kb on + strand at 2619.118 kb on + strand at 2619.118 kb on + strand at 2619.120 kb on + strand at 2619.120 kb on + strand at 2619.123 kb on + strand, within BWI76_RS12535 at 2619.123 kb on + strand, within BWI76_RS12535 at 2619.123 kb on + strand, within BWI76_RS12535 at 2619.126 kb on - strand, within BWI76_RS12535 at 2619.128 kb on + strand, within BWI76_RS12535 at 2619.168 kb on + strand, within BWI76_RS12535 at 2619.168 kb on + strand, within BWI76_RS12535 at 2619.181 kb on + strand, within BWI76_RS12535 at 2619.235 kb on + strand, within BWI76_RS12535 at 2619.235 kb on + strand, within BWI76_RS12535 at 2619.265 kb on + strand, within BWI76_RS12535 at 2619.267 kb on - strand, within BWI76_RS12535 at 2619.267 kb on - strand, within BWI76_RS12535 at 2619.279 kb on + strand, within BWI76_RS12535 at 2619.279 kb on + strand, within BWI76_RS12535 at 2619.279 kb on + strand, within BWI76_RS12535 at 2619.282 kb on - strand at 2619.436 kb on - strand at 2619.450 kb on - strand at 2619.497 kb on + strand at 2619.622 kb on + strand at 2619.623 kb on + strand at 2619.631 kb on + strand at 2619.633 kb on + strand at 2619.633 kb on + strand at 2619.633 kb on + strand at 2619.633 kb on + strand at 2619.633 kb on + strand at 2619.633 kb on + strand at 2619.633 kb on + strand at 2619.633 kb on + strand at 2619.633 kb on + strand at 2619.633 kb on + strand at 2619.634 kb on + strand at 2619.641 kb on - strand at 2619.641 kb on - strand at 2619.641 kb on - strand at 2619.641 kb on - strand at 2619.654 kb on - strand at 2619.679 kb on - strand at 2619.679 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 2,616,259 - BWI76_RS12525 0.45 -0.1 2,616,323 - BWI76_RS12525 0.49 -2.1 2,616,343 - BWI76_RS12525 0.50 -1.6 2,616,353 - BWI76_RS12525 0.51 -1.5 2,616,384 - BWI76_RS12525 0.53 -2.6 2,616,475 - BWI76_RS12525 0.58 -0.5 2,616,514 + BWI76_RS12525 0.61 +0.0 2,616,523 - BWI76_RS12525 0.61 -0.6 2,616,619 - BWI76_RS12525 0.67 -0.0 2,616,702 - BWI76_RS12525 0.72 +1.6 2,616,744 - BWI76_RS12525 0.74 -2.8 2,616,776 - BWI76_RS12525 0.76 -2.9 2,616,793 + BWI76_RS12525 0.77 +0.0 2,616,801 - BWI76_RS12525 0.78 +0.6 2,616,806 + BWI76_RS12525 0.78 -2.2 2,616,814 - BWI76_RS12525 0.78 -0.1 2,616,907 + BWI76_RS12525 0.84 +0.4 2,616,907 + BWI76_RS12525 0.84 +2.1 2,616,915 - BWI76_RS12525 0.84 +2.9 2,616,916 - BWI76_RS12525 0.84 -3.0 2,616,933 + BWI76_RS12525 0.85 +2.9 2,616,961 - BWI76_RS12525 0.87 -2.3 2,617,067 + +0.1 2,617,075 - -0.2 2,617,187 - -0.9 2,617,187 - +1.6 2,617,239 + -2.3 2,617,261 + +1.2 2,617,300 - -0.7 2,617,325 - -0.1 2,617,337 + +1.1 2,617,547 - BWI76_RS12530 0.22 -0.3 2,617,565 - BWI76_RS12530 0.23 -1.0 2,617,566 - BWI76_RS12530 0.23 +1.1 2,617,590 + -0.2 2,617,590 + BWI76_RS12530 0.24 -1.6 2,617,598 - BWI76_RS12530 0.25 +1.0 2,617,598 - BWI76_RS12530 0.25 -4.1 2,617,631 - BWI76_RS12530 0.27 -2.4 2,617,638 - BWI76_RS12530 0.28 -2.8 2,617,649 - BWI76_RS12530 0.29 -1.2 2,617,787 + BWI76_RS12530 0.38 -1.5 2,617,787 + BWI76_RS12530 0.38 -2.0 2,617,800 - BWI76_RS12530 0.39 -0.3 2,617,815 - BWI76_RS12530 0.40 -1.5 2,617,831 + BWI76_RS12530 0.41 -0.1 2,617,839 - -0.7 2,617,889 + BWI76_RS12530 0.45 -1.1 2,617,937 + BWI76_RS12530 0.48 -2.0 2,617,956 + BWI76_RS12530 0.50 +0.7 2,617,964 - BWI76_RS12530 0.50 +0.3 2,617,964 - BWI76_RS12530 0.50 -3.0 2,617,997 - BWI76_RS12530 0.52 -1.6 2,618,015 + BWI76_RS12530 0.54 +0.1 2,618,118 + BWI76_RS12530 0.61 +0.7 2,618,126 - BWI76_RS12530 0.61 -3.3 2,618,126 - BWI76_RS12530 0.61 +0.2 2,618,169 + BWI76_RS12530 0.64 -1.7 2,618,169 + BWI76_RS12530 0.64 -1.5 2,618,169 + BWI76_RS12530 0.64 +0.3 2,618,169 + BWI76_RS12530 0.64 -1.0 2,618,185 - BWI76_RS12530 0.65 -1.8 2,618,192 + BWI76_RS12530 0.66 -0.8 2,618,197 + BWI76_RS12530 0.66 +0.3 2,618,200 - BWI76_RS12530 0.66 +0.1 2,618,248 + BWI76_RS12530 0.70 -2.4 2,618,349 + BWI76_RS12530 0.77 -1.5 2,618,357 - BWI76_RS12530 0.77 +1.0 2,618,397 + BWI76_RS12530 0.80 +0.2 2,618,405 - BWI76_RS12530 0.80 +0.9 2,618,405 - BWI76_RS12530 0.80 +1.6 2,618,413 - BWI76_RS12530 0.81 -1.0 2,618,454 + BWI76_RS12530 0.84 -1.6 2,618,531 - BWI76_RS12530 0.89 +0.7 2,618,541 - BWI76_RS12530 0.90 -0.1 2,618,687 + +3.7 2,618,695 - +0.5 2,618,706 + +1.6 2,618,709 - +0.8 2,618,709 - +0.1 2,618,711 - -0.5 2,618,714 - -0.5 2,618,714 - -1.6 2,618,714 - +1.0 2,618,826 - -1.1 2,618,869 - +2.0 2,618,869 - +0.2 2,618,869 - -1.2 2,618,998 + +2.1 2,618,998 + +1.1 2,618,998 + +0.1 2,619,006 - -0.7 2,619,056 + -1.2 2,619,064 - +0.5 2,619,118 + +1.1 2,619,118 + +2.3 2,619,118 + +1.1 2,619,118 + +1.1 2,619,118 + -3.3 2,619,118 + -1.3 2,619,118 + +0.7 2,619,118 + -1.2 2,619,118 + -2.5 2,619,118 + +0.7 2,619,118 + -0.1 2,619,118 + -1.7 2,619,120 + +3.5 2,619,120 + -1.1 2,619,123 + BWI76_RS12535 0.11 -2.1 2,619,123 + BWI76_RS12535 0.11 -2.1 2,619,123 + BWI76_RS12535 0.11 -2.2 2,619,126 - BWI76_RS12535 0.12 +0.8 2,619,128 + BWI76_RS12535 0.13 +0.6 2,619,168 + BWI76_RS12535 0.33 +1.1 2,619,168 + BWI76_RS12535 0.33 -2.8 2,619,181 + BWI76_RS12535 0.39 +0.7 2,619,235 + BWI76_RS12535 0.66 +0.1 2,619,235 + BWI76_RS12535 0.66 -0.7 2,619,265 + BWI76_RS12535 0.80 -0.2 2,619,267 - BWI76_RS12535 0.81 +1.2 2,619,267 - BWI76_RS12535 0.81 -0.1 2,619,279 + BWI76_RS12535 0.87 +0.7 2,619,279 + BWI76_RS12535 0.87 -1.3 2,619,279 + BWI76_RS12535 0.87 -1.6 2,619,282 - -0.5 2,619,436 - +0.2 2,619,450 - -2.5 2,619,497 + -0.2 2,619,622 + -0.3 2,619,623 + +0.2 2,619,631 + +0.7 2,619,633 + -2.1 2,619,633 + -1.5 2,619,633 + +2.0 2,619,633 + +1.1 2,619,633 + -0.3 2,619,633 + -1.3 2,619,633 + -0.8 2,619,633 + +1.8 2,619,633 + -0.9 2,619,633 + +0.4 2,619,634 + -3.3 2,619,641 - -2.7 2,619,641 - -0.2 2,619,641 - +2.1 2,619,641 - -0.9 2,619,654 - +2.1 2,619,679 - -0.2 2,619,679 - -2.4
Or see this region's nucleotide sequence