Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS11385 and BWI76_RS11390 are separated by 96 nucleotides BWI76_RS11390 and BWI76_RS11395 overlap by 4 nucleotides BWI76_RS11395 and BWI76_RS11400 are separated by 180 nucleotides
BWI76_RS11385: BWI76_RS11385 - TonB-dependent siderophore receptor, at 2,399,055 to 2,401,385
_RS11385
BWI76_RS11390: BWI76_RS11390 - iron dicitrate transport regulator FecR, at 2,401,482 to 2,402,429
_RS11390
BWI76_RS11395: BWI76_RS11395 - RNA polymerase sigma factor FecI, at 2,402,426 to 2,402,947
_RS11395
BWI76_RS11400: BWI76_RS11400 - SAM-dependent methyltransferase, at 2,403,128 to 2,403,280
_RS11400
Position (kb)
2401
2402
2403 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2400.482 kb on + strand, within BWI76_RS11385 at 2400.487 kb on + strand, within BWI76_RS11385 at 2400.495 kb on - strand, within BWI76_RS11385 at 2400.495 kb on - strand, within BWI76_RS11385 at 2400.500 kb on - strand, within BWI76_RS11385 at 2400.585 kb on - strand, within BWI76_RS11385 at 2401.081 kb on + strand, within BWI76_RS11385 at 2401.158 kb on + strand at 2401.248 kb on + strand at 2401.626 kb on + strand, within BWI76_RS11390 at 2401.944 kb on + strand, within BWI76_RS11390 at 2402.090 kb on - strand, within BWI76_RS11390 at 2402.309 kb on - strand, within BWI76_RS11390 at 2402.412 kb on + strand at 2402.582 kb on - strand, within BWI76_RS11395 at 2402.707 kb on - strand, within BWI76_RS11395 at 2402.819 kb on - strand, within BWI76_RS11395 at 2402.862 kb on - strand, within BWI76_RS11395 at 2402.882 kb on + strand, within BWI76_RS11395 at 2402.890 kb on - strand, within BWI76_RS11395 at 2402.925 kb on - strand at 2403.133 kb on + strand at 2403.155 kb on + strand, within BWI76_RS11400 at 2403.163 kb on - strand, within BWI76_RS11400 at 2403.165 kb on - strand, within BWI76_RS11400 at 2403.165 kb on - strand, within BWI76_RS11400 at 2403.188 kb on + strand, within BWI76_RS11400 at 2403.238 kb on + strand, within BWI76_RS11400 at 2403.238 kb on + strand, within BWI76_RS11400 at 2403.238 kb on + strand, within BWI76_RS11400 at 2403.238 kb on + strand, within BWI76_RS11400 at 2403.248 kb on + strand, within BWI76_RS11400 at 2403.350 kb on + strand at 2403.404 kb on + strand at 2403.412 kb on - strand at 2403.421 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 2,400,482 + BWI76_RS11385 0.61 +1.4 2,400,487 + BWI76_RS11385 0.61 -0.2 2,400,495 - BWI76_RS11385 0.62 +3.5 2,400,495 - BWI76_RS11385 0.62 -0.3 2,400,500 - BWI76_RS11385 0.62 +1.2 2,400,585 - BWI76_RS11385 0.66 -1.8 2,401,081 + BWI76_RS11385 0.87 -0.0 2,401,158 + +0.3 2,401,248 + -0.2 2,401,626 + BWI76_RS11390 0.15 -2.4 2,401,944 + BWI76_RS11390 0.49 -1.2 2,402,090 - BWI76_RS11390 0.64 -1.3 2,402,309 - BWI76_RS11390 0.87 -0.2 2,402,412 + -0.9 2,402,582 - BWI76_RS11395 0.30 +0.1 2,402,707 - BWI76_RS11395 0.54 -1.6 2,402,819 - BWI76_RS11395 0.75 -1.5 2,402,862 - BWI76_RS11395 0.84 +0.0 2,402,882 + BWI76_RS11395 0.87 -1.0 2,402,890 - BWI76_RS11395 0.89 +0.7 2,402,925 - +0.5 2,403,133 + -0.4 2,403,155 + BWI76_RS11400 0.18 +0.4 2,403,163 - BWI76_RS11400 0.23 +0.0 2,403,165 - BWI76_RS11400 0.24 +1.1 2,403,165 - BWI76_RS11400 0.24 +0.6 2,403,188 + BWI76_RS11400 0.39 +0.6 2,403,238 + BWI76_RS11400 0.72 -0.5 2,403,238 + BWI76_RS11400 0.72 -1.1 2,403,238 + BWI76_RS11400 0.72 -1.1 2,403,238 + BWI76_RS11400 0.72 +0.9 2,403,248 + BWI76_RS11400 0.78 -0.1 2,403,350 + +1.2 2,403,404 + -0.4 2,403,412 - -1.2 2,403,421 + -0.1
Or see this region's nucleotide sequence