Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS11385

Experiment: L-Arginine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS11375 and BWI76_RS11380 overlap by 4 nucleotidesBWI76_RS11380 and BWI76_RS11385 are separated by 58 nucleotidesBWI76_RS11385 and BWI76_RS11390 are separated by 96 nucleotides BWI76_RS11375: BWI76_RS11375 - iron-dicitrate transporter permease subunit, at 2,397,099 to 2,398,097 _RS11375 BWI76_RS11380: BWI76_RS11380 - iron-dicitrate transporter substrate-binding subunit, at 2,398,094 to 2,398,996 _RS11380 BWI76_RS11385: BWI76_RS11385 - TonB-dependent siderophore receptor, at 2,399,055 to 2,401,385 _RS11385 BWI76_RS11390: BWI76_RS11390 - iron dicitrate transport regulator FecR, at 2,401,482 to 2,402,429 _RS11390 Position (kb) 2399 2400 2401 2402Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 2398.281 kb on + strand, within BWI76_RS11380at 2398.328 kb on - strand, within BWI76_RS11380at 2398.416 kb on - strand, within BWI76_RS11380at 2398.872 kb on - strand, within BWI76_RS11380at 2398.883 kb on - strand, within BWI76_RS11380at 2398.908 kb on - strandat 2398.958 kb on - strandat 2399.078 kb on + strandat 2399.208 kb on + strandat 2399.789 kb on - strand, within BWI76_RS11385at 2399.789 kb on - strand, within BWI76_RS11385at 2399.853 kb on + strand, within BWI76_RS11385at 2399.885 kb on + strand, within BWI76_RS11385at 2400.165 kb on + strand, within BWI76_RS11385at 2400.178 kb on - strand, within BWI76_RS11385at 2400.191 kb on + strand, within BWI76_RS11385at 2400.482 kb on + strand, within BWI76_RS11385at 2400.487 kb on + strand, within BWI76_RS11385at 2400.495 kb on - strand, within BWI76_RS11385at 2400.495 kb on - strand, within BWI76_RS11385at 2400.500 kb on - strand, within BWI76_RS11385at 2400.585 kb on - strand, within BWI76_RS11385at 2401.081 kb on + strand, within BWI76_RS11385at 2401.158 kb on + strandat 2401.248 kb on + strandat 2401.626 kb on + strand, within BWI76_RS11390at 2401.944 kb on + strand, within BWI76_RS11390at 2402.090 kb on - strand, within BWI76_RS11390at 2402.309 kb on - strand, within BWI76_RS11390

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine (N)
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2,398,281 + BWI76_RS11380 0.21 +0.3
2,398,328 - BWI76_RS11380 0.26 +0.7
2,398,416 - BWI76_RS11380 0.36 +0.6
2,398,872 - BWI76_RS11380 0.86 +0.1
2,398,883 - BWI76_RS11380 0.87 -0.1
2,398,908 - -3.7
2,398,958 - +1.3
2,399,078 + -0.0
2,399,208 + -0.4
2,399,789 - BWI76_RS11385 0.31 +0.6
2,399,789 - BWI76_RS11385 0.31 -0.9
2,399,853 + BWI76_RS11385 0.34 +2.4
2,399,885 + BWI76_RS11385 0.36 +0.1
2,400,165 + BWI76_RS11385 0.48 +1.2
2,400,178 - BWI76_RS11385 0.48 -0.2
2,400,191 + BWI76_RS11385 0.49 -0.2
2,400,482 + BWI76_RS11385 0.61 +1.4
2,400,487 + BWI76_RS11385 0.61 -0.2
2,400,495 - BWI76_RS11385 0.62 +3.5
2,400,495 - BWI76_RS11385 0.62 -0.3
2,400,500 - BWI76_RS11385 0.62 +1.2
2,400,585 - BWI76_RS11385 0.66 -1.8
2,401,081 + BWI76_RS11385 0.87 -0.0
2,401,158 + +0.3
2,401,248 + -0.2
2,401,626 + BWI76_RS11390 0.15 -2.4
2,401,944 + BWI76_RS11390 0.49 -1.2
2,402,090 - BWI76_RS11390 0.64 -1.3
2,402,309 - BWI76_RS11390 0.87 -0.2

Or see this region's nucleotide sequence