Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS09350 and BWI76_RS09355 are separated by 25 nucleotides BWI76_RS09355 and BWI76_RS09360 are separated by 10 nucleotides BWI76_RS09360 and BWI76_RS09365 are separated by 149 nucleotides
BWI76_RS09350: BWI76_RS09350 - hypothetical protein, at 1,961,356 to 1,963,533
_RS09350
BWI76_RS09355: BWI76_RS09355 - hypothetical protein, at 1,963,559 to 1,964,257
_RS09355
BWI76_RS09360: BWI76_RS09360 - hypothetical protein, at 1,964,268 to 1,965,338
_RS09360
BWI76_RS09365: BWI76_RS09365 - phage tail sheath protein, at 1,965,488 to 1,966,660
_RS09365
Position (kb)
1964
1965
1966 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1963.329 kb on + strand at 1963.336 kb on + strand at 1963.351 kb on + strand at 1963.407 kb on + strand at 1963.407 kb on + strand at 1963.407 kb on + strand at 1963.407 kb on + strand at 1963.417 kb on - strand at 1963.474 kb on + strand at 1963.489 kb on + strand at 1963.489 kb on + strand at 1963.489 kb on + strand at 1963.489 kb on + strand at 1963.567 kb on + strand at 1963.567 kb on + strand at 1963.575 kb on - strand at 1963.597 kb on + strand at 1963.598 kb on + strand at 1963.604 kb on + strand at 1963.609 kb on + strand at 1963.610 kb on + strand at 1963.610 kb on + strand at 1963.630 kb on - strand, within BWI76_RS09355 at 1963.636 kb on + strand at 1963.639 kb on - strand, within BWI76_RS09355 at 1963.668 kb on + strand, within BWI76_RS09355 at 1963.668 kb on + strand, within BWI76_RS09355 at 1963.668 kb on + strand, within BWI76_RS09355 at 1963.676 kb on - strand, within BWI76_RS09355 at 1963.676 kb on - strand, within BWI76_RS09355 at 1963.676 kb on - strand, within BWI76_RS09355 at 1963.676 kb on - strand, within BWI76_RS09355 at 1963.686 kb on + strand, within BWI76_RS09355 at 1963.690 kb on + strand, within BWI76_RS09355 at 1963.690 kb on + strand, within BWI76_RS09355 at 1963.697 kb on + strand, within BWI76_RS09355 at 1963.707 kb on - strand, within BWI76_RS09355 at 1963.712 kb on + strand, within BWI76_RS09355 at 1963.713 kb on + strand, within BWI76_RS09355 at 1963.720 kb on - strand, within BWI76_RS09355 at 1963.733 kb on + strand, within BWI76_RS09355 at 1963.733 kb on + strand, within BWI76_RS09355 at 1963.735 kb on + strand, within BWI76_RS09355 at 1963.735 kb on + strand, within BWI76_RS09355 at 1963.743 kb on + strand, within BWI76_RS09355 at 1963.759 kb on + strand, within BWI76_RS09355 at 1963.787 kb on - strand, within BWI76_RS09355 at 1963.792 kb on + strand, within BWI76_RS09355 at 1963.792 kb on + strand, within BWI76_RS09355 at 1963.800 kb on - strand, within BWI76_RS09355 at 1963.800 kb on - strand, within BWI76_RS09355 at 1963.800 kb on - strand, within BWI76_RS09355 at 1963.854 kb on - strand, within BWI76_RS09355 at 1963.856 kb on + strand, within BWI76_RS09355 at 1963.877 kb on + strand, within BWI76_RS09355 at 1963.890 kb on + strand, within BWI76_RS09355 at 1963.940 kb on + strand, within BWI76_RS09355 at 1964.165 kb on + strand, within BWI76_RS09355 at 1964.167 kb on + strand, within BWI76_RS09355 at 1964.173 kb on - strand, within BWI76_RS09355 at 1964.177 kb on + strand, within BWI76_RS09355 at 1964.177 kb on + strand, within BWI76_RS09355 at 1964.182 kb on + strand, within BWI76_RS09355 at 1964.196 kb on + strand at 1964.289 kb on + strand at 1964.297 kb on - strand at 1964.510 kb on + strand, within BWI76_RS09360 at 1964.518 kb on - strand, within BWI76_RS09360 at 1964.518 kb on - strand, within BWI76_RS09360 at 1964.541 kb on - strand, within BWI76_RS09360 at 1964.723 kb on - strand, within BWI76_RS09360 at 1964.723 kb on - strand, within BWI76_RS09360 at 1964.925 kb on + strand, within BWI76_RS09360 at 1964.970 kb on - strand, within BWI76_RS09360 at 1965.357 kb on + strand at 1965.502 kb on + strand at 1965.740 kb on - strand, within BWI76_RS09365 at 1965.754 kb on + strand, within BWI76_RS09365 at 1965.847 kb on + strand, within BWI76_RS09365 at 1965.922 kb on - strand, within BWI76_RS09365 at 1966.008 kb on + strand, within BWI76_RS09365 at 1966.026 kb on - strand at 1966.209 kb on - strand, within BWI76_RS09365 at 1966.219 kb on - strand, within BWI76_RS09365
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 1,963,329 + -0.5 1,963,336 + +1.1 1,963,351 + +0.3 1,963,407 + +2.1 1,963,407 + +0.6 1,963,407 + +1.3 1,963,407 + -0.0 1,963,417 - +1.7 1,963,474 + +0.9 1,963,489 + -0.8 1,963,489 + +0.3 1,963,489 + -2.0 1,963,489 + +0.1 1,963,567 + -3.0 1,963,567 + +0.7 1,963,575 - -0.0 1,963,597 + +1.9 1,963,598 + -1.4 1,963,604 + +0.7 1,963,609 + -0.8 1,963,610 + +0.6 1,963,610 + +0.6 1,963,630 - BWI76_RS09355 0.10 -0.5 1,963,636 + -0.0 1,963,639 - BWI76_RS09355 0.11 -1.0 1,963,668 + BWI76_RS09355 0.16 +0.5 1,963,668 + BWI76_RS09355 0.16 +0.9 1,963,668 + BWI76_RS09355 0.16 +0.7 1,963,676 - BWI76_RS09355 0.17 -1.4 1,963,676 - BWI76_RS09355 0.17 -1.5 1,963,676 - BWI76_RS09355 0.17 -0.0 1,963,676 - BWI76_RS09355 0.17 -0.5 1,963,686 + BWI76_RS09355 0.18 +0.0 1,963,690 + BWI76_RS09355 0.19 +1.7 1,963,690 + BWI76_RS09355 0.19 +0.5 1,963,697 + BWI76_RS09355 0.20 +0.3 1,963,707 - BWI76_RS09355 0.21 +0.9 1,963,712 + BWI76_RS09355 0.22 -1.0 1,963,713 + BWI76_RS09355 0.22 -1.0 1,963,720 - BWI76_RS09355 0.23 +0.8 1,963,733 + BWI76_RS09355 0.25 +0.9 1,963,733 + BWI76_RS09355 0.25 +0.2 1,963,735 + BWI76_RS09355 0.25 +1.2 1,963,735 + BWI76_RS09355 0.25 -1.9 1,963,743 + BWI76_RS09355 0.26 -1.7 1,963,759 + BWI76_RS09355 0.29 +0.7 1,963,787 - BWI76_RS09355 0.33 -1.5 1,963,792 + BWI76_RS09355 0.33 +1.3 1,963,792 + BWI76_RS09355 0.33 +1.2 1,963,800 - BWI76_RS09355 0.34 -3.0 1,963,800 - BWI76_RS09355 0.34 -0.8 1,963,800 - BWI76_RS09355 0.34 -4.2 1,963,854 - BWI76_RS09355 0.42 -0.3 1,963,856 + BWI76_RS09355 0.42 -0.5 1,963,877 + BWI76_RS09355 0.45 +0.4 1,963,890 + BWI76_RS09355 0.47 -0.0 1,963,940 + BWI76_RS09355 0.55 -0.4 1,964,165 + BWI76_RS09355 0.87 +0.3 1,964,167 + BWI76_RS09355 0.87 -0.0 1,964,173 - BWI76_RS09355 0.88 +2.3 1,964,177 + BWI76_RS09355 0.88 +1.2 1,964,177 + BWI76_RS09355 0.88 +0.2 1,964,182 + BWI76_RS09355 0.89 -0.3 1,964,196 + +0.9 1,964,289 + +0.7 1,964,297 - +0.2 1,964,510 + BWI76_RS09360 0.23 -0.9 1,964,518 - BWI76_RS09360 0.23 -3.1 1,964,518 - BWI76_RS09360 0.23 -3.9 1,964,541 - BWI76_RS09360 0.25 -1.1 1,964,723 - BWI76_RS09360 0.42 -1.4 1,964,723 - BWI76_RS09360 0.42 -0.4 1,964,925 + BWI76_RS09360 0.61 -2.3 1,964,970 - BWI76_RS09360 0.66 +0.6 1,965,357 + -0.1 1,965,502 + +0.2 1,965,740 - BWI76_RS09365 0.21 +0.7 1,965,754 + BWI76_RS09365 0.23 +0.5 1,965,847 + BWI76_RS09365 0.31 +1.0 1,965,922 - BWI76_RS09365 0.37 -0.0 1,966,008 + BWI76_RS09365 0.44 -1.0 1,966,026 - +0.7 1,966,209 - BWI76_RS09365 0.61 +0.2 1,966,219 - BWI76_RS09365 0.62 -1.0
Or see this region's nucleotide sequence