Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS09165

Experiment: L-Arginine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS09160 and BWI76_RS09165 are separated by 47 nucleotidesBWI76_RS09165 and BWI76_RS09170 overlap by 1 nucleotides BWI76_RS09160: BWI76_RS09160 - multidrug transporter MdfA, at 1,934,987 to 1,936,222 _RS09160 BWI76_RS09165: BWI76_RS09165 - phosphatase YbjI, at 1,936,270 to 1,937,085 _RS09165 BWI76_RS09170: BWI76_RS09170 - MFS transporter, at 1,937,085 to 1,938,287 _RS09170 Position (kb) 1936 1937 1938Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1935.331 kb on + strand, within BWI76_RS09160at 1935.341 kb on - strand, within BWI76_RS09160at 1935.341 kb on - strand, within BWI76_RS09160at 1935.394 kb on + strand, within BWI76_RS09160at 1936.073 kb on - strand, within BWI76_RS09160at 1936.299 kb on - strandat 1936.360 kb on + strand, within BWI76_RS09165at 1936.463 kb on - strand, within BWI76_RS09165at 1936.472 kb on + strand, within BWI76_RS09165at 1936.479 kb on - strand, within BWI76_RS09165at 1936.535 kb on + strandat 1936.543 kb on - strand, within BWI76_RS09165at 1936.922 kb on - strand, within BWI76_RS09165at 1937.081 kb on - strandat 1937.470 kb on - strand, within BWI76_RS09170at 1937.500 kb on - strand, within BWI76_RS09170at 1937.540 kb on + strand, within BWI76_RS09170at 1937.792 kb on + strand, within BWI76_RS09170at 1937.837 kb on + strand, within BWI76_RS09170at 1937.905 kb on + strand, within BWI76_RS09170at 1938.009 kb on - strand, within BWI76_RS09170

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine (N)
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1,935,331 + BWI76_RS09160 0.28 -0.0
1,935,341 - BWI76_RS09160 0.29 -1.0
1,935,341 - BWI76_RS09160 0.29 -0.2
1,935,394 + BWI76_RS09160 0.33 +0.4
1,936,073 - BWI76_RS09160 0.88 +0.7
1,936,299 - -0.1
1,936,360 + BWI76_RS09165 0.11 +2.0
1,936,463 - BWI76_RS09165 0.24 +2.3
1,936,472 + BWI76_RS09165 0.25 +0.4
1,936,479 - BWI76_RS09165 0.26 +0.5
1,936,535 + -0.5
1,936,543 - BWI76_RS09165 0.33 +0.6
1,936,922 - BWI76_RS09165 0.80 -0.2
1,937,081 - -0.8
1,937,470 - BWI76_RS09170 0.32 +2.2
1,937,500 - BWI76_RS09170 0.34 +1.0
1,937,540 + BWI76_RS09170 0.38 +0.7
1,937,792 + BWI76_RS09170 0.59 +1.1
1,937,837 + BWI76_RS09170 0.63 -0.4
1,937,905 + BWI76_RS09170 0.68 -2.9
1,938,009 - BWI76_RS09170 0.77 +0.1

Or see this region's nucleotide sequence