Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS06570

Experiment: L-Arginine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS06565 and BWI76_RS06570 are separated by 126 nucleotidesBWI76_RS06570 and BWI76_RS06575 are separated by 47 nucleotides BWI76_RS06565: BWI76_RS06565 - putative periplasmic solute-binding protein, at 1,379,614 to 1,381,314 _RS06565 BWI76_RS06570: BWI76_RS06570 - thiamin pyrimidine pyrophosphate hydrolase, at 1,381,441 to 1,382,259 _RS06570 BWI76_RS06575: BWI76_RS06575 - cysteine synthase, at 1,382,307 to 1,383,359 _RS06575 Position (kb) 1381 1382 1383Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 1380.560 kb on - strand, within BWI76_RS06565at 1380.610 kb on + strand, within BWI76_RS06565at 1380.742 kb on + strand, within BWI76_RS06565at 1380.755 kb on - strand, within BWI76_RS06565at 1380.799 kb on + strand, within BWI76_RS06565at 1380.939 kb on - strand, within BWI76_RS06565at 1381.139 kb on + strand, within BWI76_RS06565at 1381.195 kb on + strandat 1381.317 kb on - strandat 1381.327 kb on - strandat 1381.672 kb on - strand, within BWI76_RS06570at 1382.023 kb on + strand, within BWI76_RS06570at 1382.751 kb on - strand, within BWI76_RS06575at 1382.751 kb on - strand, within BWI76_RS06575at 1382.869 kb on + strand, within BWI76_RS06575at 1382.917 kb on - strand, within BWI76_RS06575at 1382.926 kb on - strand, within BWI76_RS06575at 1383.246 kb on + strand, within BWI76_RS06575

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine (N)
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1,380,560 - BWI76_RS06565 0.56 +0.2
1,380,610 + BWI76_RS06565 0.59 +1.2
1,380,742 + BWI76_RS06565 0.66 -2.6
1,380,755 - BWI76_RS06565 0.67 +1.0
1,380,799 + BWI76_RS06565 0.70 +0.2
1,380,939 - BWI76_RS06565 0.78 -2.6
1,381,139 + BWI76_RS06565 0.90 +0.6
1,381,195 + +1.0
1,381,317 - +0.3
1,381,327 - -0.3
1,381,672 - BWI76_RS06570 0.28 -4.9
1,382,023 + BWI76_RS06570 0.71 +0.3
1,382,751 - BWI76_RS06575 0.42 -0.3
1,382,751 - BWI76_RS06575 0.42 +0.2
1,382,869 + BWI76_RS06575 0.53 -0.6
1,382,917 - BWI76_RS06575 0.58 -0.9
1,382,926 - BWI76_RS06575 0.59 -0.0
1,383,246 + BWI76_RS06575 0.89 +0.1

Or see this region's nucleotide sequence