Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3180

Experiment: m.b. Fusidic 0.0006 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Fusidic 0.0006 mg/ml
3,340,822	-		Dshi_3178	0.76	-0.7
3,340,863	+		Dshi_3178	0.89	+0.3
3,340,871	-				-1.4
3,340,871	-				-0.1
3,340,871	-				-0.3
3,340,871	-				+0.6
3,340,886	+				-0.3
3,340,894	-				-0.6
3,340,993	+		Dshi_3179	0.13	-1.2
3,341,124	-		Dshi_3179	0.30	-0.3
3,341,208	-		Dshi_3179	0.40	-0.8
3,341,208	-		Dshi_3179	0.40	-1.0
3,341,210	+		Dshi_3179	0.40	-0.4
3,341,224	-		Dshi_3179	0.42	+0.6
3,341,247	+		Dshi_3179	0.45	-0.7
3,341,275	-		Dshi_3179	0.49	+0.4
3,341,287	+		Dshi_3179	0.50	+0.1
3,341,407	-		Dshi_3179	0.65	-0.3
3,341,415	+		Dshi_3179	0.66	+0.1
3,341,449	-		Dshi_3179	0.70	-1.1
3,341,517	+		Dshi_3179	0.79	-0.6
3,341,587	+		Dshi_3179	0.88	+0.4
3,341,699	-				-0.5
3,341,699	-				-1.3
3,341,740	-				-0.8
3,341,743	-				-1.4
3,341,767	-				+0.0
3,341,824	+				+0.0
3,341,892	+				-0.3
3,341,892	+				-1.1
3,341,897	+				+0.0
3,341,897	+				+0.0
3,341,900	-				+0.6
3,341,915	-				+0.3
3,341,967	+		Dshi_3180	0.11	+1.2
3,341,975	-		Dshi_3180	0.12	+0.6
3,341,982	-		Dshi_3180	0.12	+0.1
3,342,003	+		Dshi_3180	0.13	+0.4
3,342,011	-		Dshi_3180	0.14	+0.5
3,342,045	-		Dshi_3180	0.16	+0.0
3,342,103	+		Dshi_3180	0.19	-0.5
3,342,103	+		Dshi_3180	0.19	-0.4
3,342,119	-		Dshi_3180	0.20	+1.1
3,342,181	+		Dshi_3180	0.23	+0.1
3,342,186	+		Dshi_3180	0.24	+0.4
3,342,189	-		Dshi_3180	0.24	+0.6
3,342,222	-		Dshi_3180	0.26	-1.6
3,342,264	-		Dshi_3180	0.28	+0.4
3,342,282	+		Dshi_3180	0.29	+0.6
3,342,282	+		Dshi_3180	0.29	-1.0
3,342,290	-		Dshi_3180	0.30	+0.1
3,342,325	-		Dshi_3180	0.32	-0.0
3,342,428	-		Dshi_3180	0.37	+0.7
3,342,467	+		Dshi_3180	0.40	+0.2
3,342,467	+		Dshi_3180	0.40	-0.1
3,342,547	-		Dshi_3180	0.44	+1.1
3,342,638	+		Dshi_3180	0.49	-0.6
3,342,638	+		Dshi_3180	0.49	-1.7
3,342,638	+		Dshi_3180	0.49	-0.5
3,342,638	+		Dshi_3180	0.49	+1.6
3,342,646	-		Dshi_3180	0.50	+0.0
3,342,646	-		Dshi_3180	0.50	+0.2
3,342,646	-		Dshi_3180	0.50	+0.5
3,342,652	-		Dshi_3180	0.50	+0.1
3,342,693	-		Dshi_3180	0.53	+0.3
3,342,818	-		Dshi_3180	0.60	-1.6
3,342,841	-		Dshi_3180	0.61	+1.3
3,342,941	-		Dshi_3180	0.67	+0.0
3,342,961	-		Dshi_3180	0.68	+0.8
3,343,006	-		Dshi_3180	0.70	+0.6
3,343,044	+		Dshi_3180	0.73	+0.3
3,343,160	+		Dshi_3180	0.79	+0.5
3,343,166	+		Dshi_3180	0.80	-1.2
3,343,202	-		Dshi_3180	0.82	+0.3
3,343,212	+		Dshi_3180	0.82	+0.2
3,343,213	-		Dshi_3180	0.82	+0.9
3,343,251	+		Dshi_3180	0.84	-0.5
3,343,267	-		Dshi_3180	0.85	+0.1
3,343,302	-		Dshi_3180	0.87	+0.0
3,343,376	+				+1.3
3,343,378	-				+1.2
3,343,422	+				-0.2
3,343,437	-				+0.4
3,343,544	-				+0.2
3,343,563	-				-0.1
3,343,596	+				+0.4
3,343,612	-				+0.0
3,343,627	+				-1.4
3,343,627	+				+1.5
3,343,634	+				-0.6
3,343,649	+				-1.1
3,343,730	-				+0.1
3,343,745	+				+0.3
3,343,829	+				-0.2
3,343,837	-				-0.2
3,343,844	+		Dshi_3181	0.10	+2.6
3,343,876	-		Dshi_3181	0.12	-0.7
3,344,047	-		Dshi_3181	0.20	+0.3
3,344,072	+		Dshi_3181	0.21	+0.2
3,344,074	+		Dshi_3181	0.21	-0.0
3,344,083	-		Dshi_3181	0.22	+0.0
3,344,127	+		Dshi_3181	0.24	+0.5
3,344,177	-		Dshi_3181	0.26	+0.8
3,344,177	-		Dshi_3181	0.26	+0.1
3,344,238	+		Dshi_3181	0.29	+1.2
3,344,246	-				+0.0
3,344,270	+		Dshi_3181	0.31	-0.7
3,344,308	-		Dshi_3181	0.33	+0.5
3,344,314	-		Dshi_3181	0.33	+0.8
3,344,394	+		Dshi_3181	0.37	+0.4
3,344,408	+		Dshi_3181	0.37	-0.6
3,344,475	+		Dshi_3181	0.41	+0.2
3,344,512	-		Dshi_3181	0.42	-0.8