Experiment: m.b. Fusidic 0.0006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3105 and Dshi_3106 are separated by 443 nucleotides Dshi_3106 and Dshi_3107 are separated by 90 nucleotides Dshi_3107 and Dshi_3108 are separated by 133 nucleotides
Dshi_3105: Dshi_3105 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (RefSeq), at 3,271,145 to 3,271,810
_3105
Dshi_3106: Dshi_3106 - pseudouridine synthase (RefSeq), at 3,272,254 to 3,272,913
_3106
Dshi_3107: Dshi_3107 - Lysine exporter protein (LYSE/YGGA) (RefSeq), at 3,273,004 to 3,273,621
_3107
Dshi_3108: Dshi_3108 - DSBA oxidoreductase (RefSeq), at 3,273,755 to 3,274,522
_3108
Position (kb)
3272
3273 Strain fitness (log2 ratio)
-1
0
1
2 at 3271.869 kb on + strand at 3271.956 kb on + strand at 3271.974 kb on - strand at 3271.974 kb on - strand at 3272.036 kb on - strand at 3272.058 kb on + strand at 3272.066 kb on - strand at 3272.159 kb on + strand at 3272.258 kb on - strand at 3272.371 kb on + strand, within Dshi_3106 at 3272.395 kb on + strand, within Dshi_3106 at 3272.482 kb on - strand, within Dshi_3106 at 3272.611 kb on - strand, within Dshi_3106 at 3272.611 kb on - strand, within Dshi_3106 at 3272.670 kb on + strand, within Dshi_3106 at 3272.765 kb on - strand, within Dshi_3106 at 3272.772 kb on - strand, within Dshi_3106 at 3272.792 kb on - strand, within Dshi_3106 at 3272.891 kb on - strand at 3272.984 kb on - strand at 3273.038 kb on + strand at 3273.046 kb on - strand at 3273.140 kb on + strand, within Dshi_3107 at 3273.140 kb on + strand, within Dshi_3107 at 3273.145 kb on + strand, within Dshi_3107 at 3273.162 kb on - strand, within Dshi_3107 at 3273.283 kb on + strand, within Dshi_3107 at 3273.306 kb on + strand, within Dshi_3107 at 3273.474 kb on - strand, within Dshi_3107 at 3273.479 kb on - strand, within Dshi_3107 at 3273.479 kb on - strand, within Dshi_3107 at 3273.537 kb on - strand, within Dshi_3107 at 3273.634 kb on + strand at 3273.634 kb on + strand at 3273.671 kb on + strand at 3273.743 kb on + strand at 3273.799 kb on - strand at 3273.812 kb on + strand at 3273.812 kb on + strand at 3273.820 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.0006 mg/ml remove 3,271,869 + -0.2 3,271,956 + +0.1 3,271,974 - -0.2 3,271,974 - +0.7 3,272,036 - +0.3 3,272,058 + +0.0 3,272,066 - +0.3 3,272,159 + -0.1 3,272,258 - +0.0 3,272,371 + Dshi_3106 0.18 +0.7 3,272,395 + Dshi_3106 0.21 +0.8 3,272,482 - Dshi_3106 0.35 -0.1 3,272,611 - Dshi_3106 0.54 +0.4 3,272,611 - Dshi_3106 0.54 +1.9 3,272,670 + Dshi_3106 0.63 +0.4 3,272,765 - Dshi_3106 0.77 -0.2 3,272,772 - Dshi_3106 0.78 -0.8 3,272,792 - Dshi_3106 0.82 +1.0 3,272,891 - +1.6 3,272,984 - -0.0 3,273,038 + +0.4 3,273,046 - +1.2 3,273,140 + Dshi_3107 0.22 +0.8 3,273,140 + Dshi_3107 0.22 +0.5 3,273,145 + Dshi_3107 0.23 -0.2 3,273,162 - Dshi_3107 0.26 +0.5 3,273,283 + Dshi_3107 0.45 -0.5 3,273,306 + Dshi_3107 0.49 +0.9 3,273,474 - Dshi_3107 0.76 -0.6 3,273,479 - Dshi_3107 0.77 +0.3 3,273,479 - Dshi_3107 0.77 -1.0 3,273,537 - Dshi_3107 0.86 +0.6 3,273,634 + +0.3 3,273,634 + +0.0 3,273,671 + +0.3 3,273,743 + -0.7 3,273,799 - +0.3 3,273,812 + -0.1 3,273,812 + +0.2 3,273,820 - +0.2
Or see this region's nucleotide sequence