Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1160
Experiment: m.b. Fusidic 0.0006 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Fusidic 0.0006 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,185,163 | + | -0.5 | |||
1,185,163 | + | +1.2 | |||
1,185,238 | - | +0.4 | |||
1,185,513 | + | -0.4 | |||
1,185,521 | - | -0.8 | |||
1,185,911 | - | Dshi_1159 | 0.55 | -0.4 | |
1,185,990 | + | Dshi_1159 | 0.70 | -0.1 | |
1,185,990 | + | Dshi_1159 | 0.70 | -0.4 | |
1,185,998 | - | Dshi_1159 | 0.72 | +0.9 | |
1,186,065 | + | Dshi_1159 | 0.85 | +0.4 | |
1,186,098 | - | +0.4 | |||
1,186,103 | - | -1.2 | |||
1,186,240 | + | Dshi_1160 | 0.11 | +0.6 | |
1,186,487 | + | Dshi_1160 | 0.40 | -0.9 | |
1,186,824 | + | Dshi_1160 | 0.80 | -0.6 | |
1,186,832 | - | Dshi_1160 | 0.81 | -0.4 | |
1,186,832 | - | Dshi_1160 | 0.81 | -0.6 | |
1,186,856 | - | Dshi_1160 | 0.84 | -0.0 | |
1,186,884 | + | Dshi_1160 | 0.88 | -0.3 | |
1,187,019 | + | +0.0 | |||
1,187,039 | + | +0.1 | |||
1,187,044 | + | -1.4 | |||
1,187,087 | - | +0.1 | |||
1,187,107 | - | +0.6 | |||
1,187,110 | + | -0.1 | |||
1,187,123 | + | -0.5 | |||
1,187,233 | + | Dshi_1161 | 0.16 | -0.2 | |
1,187,487 | - | Dshi_1161 | 0.37 | +1.6 | |
1,187,497 | + | Dshi_1161 | 0.38 | +0.8 | |
1,187,511 | + | Dshi_1161 | 0.39 | -0.8 | |
1,187,712 | - | Dshi_1161 | 0.57 | -0.3 | |
1,187,877 | + | Dshi_1161 | 0.71 | +0.1 |
Or see this region's nucleotide sequence