Strain Fitness in Shewanella oneidensis MR-1 around SO1812

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,901,218	+		SO1811	0.42	-0.3
1,901,218	+		SO1811	0.42	+1.0
1,901,218	+		SO1811	0.42	+0.1
1,901,276	+		SO1811	0.47	-0.2
1,901,538	+		SO1811	0.69	-0.8
1,901,559	-		SO1811	0.70	+0.7
1,901,560	-		SO1811	0.70	-0.2
1,901,616	+		SO1811	0.75	+0.2
1,901,679	+		SO1811	0.80	-1.9
1,901,701	-		SO1811	0.82	+0.3
1,901,706	+		SO1811	0.83	+0.3
1,902,066	-				+0.5
1,902,070	+				+0.7
1,902,331	+	mdeA	SO1812	0.11	+0.1
1,902,373	-	mdeA	SO1812	0.14	-0.4
1,902,373	-	mdeA	SO1812	0.14	-0.5
1,902,373	-	mdeA	SO1812	0.14	-0.2
1,902,407	-	mdeA	SO1812	0.17	-0.8
1,902,536	+	mdeA	SO1812	0.28	+0.4
1,902,536	+	mdeA	SO1812	0.28	-0.1
1,902,801	+	mdeA	SO1812	0.50	-0.9
1,902,820	-	mdeA	SO1812	0.52	-1.2
1,902,827	+	mdeA	SO1812	0.53	-0.4
1,902,887	-	mdeA	SO1812	0.58	+0.9
1,902,956	-	mdeA	SO1812	0.63	+0.4
1,902,986	-	mdeA	SO1812	0.66	-1.3
1,903,030	-	mdeA	SO1812	0.70	-0.5
1,903,045	-	mdeA	SO1812	0.71	+0.4
1,903,112	+	mdeA	SO1812	0.76	-0.3
1,903,148	-	mdeA	SO1812	0.79	+0.4
1,903,148	-	mdeA	SO1812	0.79	-0.1
1,903,332	+				+0.2
1,903,332	+				-0.4
1,903,369	-				+0.5
1,903,505	-				+0.4
1,903,720	-		SO1813	0.31	-0.1
1,903,786	+		SO1813	0.49	-0.3
1,903,849	+		SO1813	0.66	+0.2
1,903,917	-		SO1813	0.85	-0.8
1,903,993	-				+0.7