Strain Fitness in Shewanella oneidensis MR-1 around SO1409

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,464,963	-		SO1408	0.73	+1.6
1,464,965	-		SO1408	0.73	-0.6
1,465,043	-		SO1408	0.75	-0.1
1,465,056	-		SO1408	0.76	-0.5
1,465,070	-		SO1408	0.76	-0.1
1,465,313	+		SO1408	0.84	+0.3
1,465,324	+		SO1408	0.85	-0.0
1,465,348	+		SO1408	0.86	+0.3
1,465,348	+		SO1408	0.86	-0.3
1,465,358	+		SO1408	0.86	-1.2
1,465,366	-		SO1408	0.86	-1.6
1,465,366	-		SO1408	0.86	+0.3
1,465,435	+		SO1408	0.89	+0.2
1,465,485	+				-0.4
1,465,524	-				-0.0
1,465,540	-				-0.5
1,465,563	+				+0.4
1,465,640	-				-0.2
1,465,792	+				+0.3
1,465,797	+				-0.9
1,465,912	+		SO1409	0.23	-1.3
1,465,912	+		SO1409	0.23	-0.8
1,465,912	+		SO1409	0.23	-1.2
1,465,920	-		SO1409	0.25	-0.6
1,465,920	-		SO1409	0.25	-0.5
1,465,938	+		SO1409	0.28	-0.2
1,465,946	-		SO1409	0.29	-0.2
1,465,946	-		SO1409	0.29	+0.3
1,466,025	-		SO1409	0.43	-2.7
1,466,039	+		SO1409	0.45	-0.8
1,466,085	+		SO1409	0.53	-0.6
1,466,139	-		SO1409	0.62	-0.8
1,466,384	-				+0.2
1,466,455	+				+1.0
1,466,618	+		SO1410	0.10	-0.5
1,466,626	-		SO1410	0.11	+0.9
1,466,626	-		SO1410	0.11	-0.1
1,466,696	+		SO1410	0.21	-0.3
1,466,852	-		SO1410	0.42	+0.3
1,466,909	+		SO1410	0.50	+0.1
1,466,919	+		SO1410	0.52	-0.1
1,466,968	-		SO1410	0.58	-0.0
1,466,992	+		SO1410	0.62	-0.7
1,467,108	+		SO1410	0.78	+0.2
1,467,127	+		SO1410	0.80	-0.3
1,467,127	+		SO1410	0.80	-0.2
1,467,127	+		SO1410	0.80	-0.6
1,467,194	+		SO1410	0.89	-0.3
1,467,207	+				-0.5
1,467,207	+				-1.8
1,467,221	+				+0.1
1,467,229	-				+0.6
1,467,235	-				+0.7
1,467,240	+				-0.1