Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SO0674 and SO0675 overlap by 1 nucleotides SO0675 and SO0676 are separated by 70 nucleotides SO0676 and SO0677 are separated by 2 nucleotides SO0677 and SO0678 overlap by 1 nucleotides
SO0674: SO0674 - prophage MuSo1, protein Gp32, putative (NCBI ptt file), at 692,234 to 693,403
SO0674
SO0675: SO0675 - prophage MuSo1, major head subunit, putative (NCBI ptt file), at 693,403 to 694,323
SO0675
SO0676: SO0676 - conserved hypothetical protein (NCBI ptt file), at 694,394 to 694,840
SO0676
SO0677: SO0677 - conserved hypothetical protein (NCBI ptt file), at 694,843 to 695,283
SO0677
SO0678: SO0678 - hypothetical protein (NCBI ptt file), at 695,283 to 695,726
SO0678
Position (kb) 693
694
695 Strain fitness (log2 ratio) -1
0
1 at 692.479 kb on + strand, within SO0674 at 692.527 kb on + strand, within SO0674 at 692.535 kb on - strand, within SO0674 at 692.548 kb on + strand, within SO0674 at 692.574 kb on + strand, within SO0674 at 692.587 kb on - strand, within SO0674 at 692.621 kb on + strand, within SO0674 at 692.624 kb on + strand, within SO0674 at 692.629 kb on + strand, within SO0674 at 692.637 kb on - strand, within SO0674 at 692.637 kb on - strand, within SO0674 at 692.637 kb on - strand, within SO0674 at 692.637 kb on - strand, within SO0674 at 692.689 kb on - strand, within SO0674 at 692.735 kb on - strand, within SO0674 at 692.740 kb on - strand, within SO0674 at 692.746 kb on - strand, within SO0674 at 692.804 kb on - strand, within SO0674 at 692.811 kb on - strand, within SO0674 at 692.827 kb on - strand, within SO0674 at 692.917 kb on + strand, within SO0674 at 692.917 kb on + strand, within SO0674 at 692.925 kb on - strand, within SO0674 at 692.925 kb on - strand, within SO0674 at 693.018 kb on + strand, within SO0674 at 693.108 kb on + strand, within SO0674 at 693.116 kb on - strand, within SO0674 at 693.142 kb on + strand, within SO0674 at 693.149 kb on + strand, within SO0674 at 693.259 kb on + strand, within SO0674 at 693.259 kb on + strand, within SO0674 at 693.259 kb on + strand, within SO0674 at 693.277 kb on - strand, within SO0674 at 693.277 kb on - strand, within SO0674 at 693.426 kb on + strand at 693.432 kb on - strand at 693.434 kb on - strand at 693.451 kb on - strand at 693.474 kb on + strand at 693.482 kb on - strand at 693.482 kb on - strand at 693.531 kb on + strand, within SO0675 at 693.539 kb on - strand, within SO0675 at 693.539 kb on - strand, within SO0675 at 693.546 kb on - strand, within SO0675 at 693.568 kb on + strand, within SO0675 at 693.602 kb on + strand, within SO0675 at 693.610 kb on + strand, within SO0675 at 693.610 kb on - strand, within SO0675 at 693.696 kb on + strand, within SO0675 at 693.696 kb on + strand, within SO0675 at 693.704 kb on - strand, within SO0675 at 693.709 kb on + strand, within SO0675 at 693.730 kb on + strand, within SO0675 at 693.738 kb on - strand, within SO0675 at 693.739 kb on - strand, within SO0675 at 693.789 kb on + strand, within SO0675 at 693.789 kb on + strand, within SO0675 at 693.797 kb on - strand, within SO0675 at 693.868 kb on - strand, within SO0675 at 693.889 kb on - strand, within SO0675 at 693.892 kb on + strand, within SO0675 at 693.901 kb on + strand, within SO0675 at 693.926 kb on - strand, within SO0675 at 693.995 kb on - strand, within SO0675 at 694.045 kb on - strand, within SO0675 at 694.050 kb on - strand, within SO0675 at 694.060 kb on + strand, within SO0675 at 694.089 kb on - strand, within SO0675 at 694.145 kb on - strand, within SO0675 at 694.194 kb on - strand, within SO0675 at 694.216 kb on - strand, within SO0675 at 694.238 kb on + strand at 694.246 kb on - strand at 694.270 kb on + strand at 694.270 kb on - strand at 694.287 kb on + strand at 694.317 kb on - strand at 694.347 kb on - strand at 694.456 kb on + strand, within SO0676 at 694.463 kb on + strand, within SO0676 at 694.464 kb on - strand, within SO0676 at 694.486 kb on - strand, within SO0676 at 694.492 kb on - strand, within SO0676 at 694.546 kb on + strand, within SO0676 at 694.546 kb on + strand, within SO0676 at 694.563 kb on + strand, within SO0676 at 694.563 kb on + strand, within SO0676 at 694.648 kb on + strand, within SO0676 at 694.738 kb on + strand, within SO0676 at 694.754 kb on + strand, within SO0676 at 694.785 kb on - strand, within SO0676 at 694.862 kb on - strand at 694.872 kb on - strand at 694.899 kb on + strand, within SO0677 at 694.899 kb on + strand, within SO0677 at 694.907 kb on - strand, within SO0677 at 694.907 kb on - strand, within SO0677 at 694.909 kb on - strand, within SO0677 at 694.921 kb on + strand, within SO0677 at 695.102 kb on + strand, within SO0677 at 695.102 kb on + strand, within SO0677 at 695.110 kb on - strand, within SO0677 at 695.110 kb on - strand, within SO0677 at 695.110 kb on - strand, within SO0677 at 695.157 kb on + strand, within SO0677 at 695.157 kb on + strand, within SO0677 at 695.182 kb on - strand, within SO0677 at 695.182 kb on - strand, within SO0677 at 695.266 kb on + strand at 695.280 kb on - strand at 695.322 kb on + strand at 695.322 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 692,479 + SO0674 0.21 -0.2 692,527 + SO0674 0.25 +0.4 692,535 - SO0674 0.26 -0.4 692,548 + SO0674 0.27 -0.3 692,574 + SO0674 0.29 +0.1 692,587 - SO0674 0.30 +0.4 692,621 + SO0674 0.33 -0.6 692,624 + SO0674 0.33 -0.2 692,629 + SO0674 0.34 -0.2 692,637 - SO0674 0.34 +0.1 692,637 - SO0674 0.34 -0.1 692,637 - SO0674 0.34 -0.3 692,637 - SO0674 0.34 -0.0 692,689 - SO0674 0.39 +1.2 692,735 - SO0674 0.43 -0.1 692,740 - SO0674 0.43 +1.3 692,746 - SO0674 0.44 -0.3 692,804 - SO0674 0.49 +0.6 692,811 - SO0674 0.49 +0.4 692,827 - SO0674 0.51 -0.5 692,917 + SO0674 0.58 +0.2 692,917 + SO0674 0.58 -0.6 692,925 - SO0674 0.59 +0.2 692,925 - SO0674 0.59 +0.1 693,018 + SO0674 0.67 +0.1 693,108 + SO0674 0.75 -0.1 693,116 - SO0674 0.75 +0.0 693,142 + SO0674 0.78 -0.1 693,149 + SO0674 0.78 +0.1 693,259 + SO0674 0.88 +0.3 693,259 + SO0674 0.88 -0.8 693,259 + SO0674 0.88 +0.4 693,277 - SO0674 0.89 -0.1 693,277 - SO0674 0.89 -0.2 693,426 + -0.1 693,432 - -0.4 693,434 - -0.7 693,451 - -0.5 693,474 + +0.0 693,482 - +0.2 693,482 - -0.3 693,531 + SO0675 0.14 +0.2 693,539 - SO0675 0.15 -1.1 693,539 - SO0675 0.15 +0.4 693,546 - SO0675 0.16 +0.6 693,568 + SO0675 0.18 +0.2 693,602 + SO0675 0.22 -0.8 693,610 + SO0675 0.22 +0.3 693,610 - SO0675 0.22 +0.2 693,696 + SO0675 0.32 -0.3 693,696 + SO0675 0.32 +0.3 693,704 - SO0675 0.33 +0.9 693,709 + SO0675 0.33 -0.7 693,730 + SO0675 0.36 +0.4 693,738 - SO0675 0.36 +0.2 693,739 - SO0675 0.36 -0.8 693,789 + SO0675 0.42 -0.0 693,789 + SO0675 0.42 +0.0 693,797 - SO0675 0.43 -0.4 693,868 - SO0675 0.50 -0.2 693,889 - SO0675 0.53 -0.1 693,892 + SO0675 0.53 +0.6 693,901 + SO0675 0.54 -0.4 693,926 - SO0675 0.57 +1.0 693,995 - SO0675 0.64 -0.3 694,045 - SO0675 0.70 -0.4 694,050 - SO0675 0.70 -0.9 694,060 + SO0675 0.71 -0.9 694,089 - SO0675 0.74 -0.1 694,145 - SO0675 0.81 -0.5 694,194 - SO0675 0.86 -0.0 694,216 - SO0675 0.88 +0.4 694,238 + +0.8 694,246 - +0.4 694,270 + -0.2 694,270 - -1.0 694,287 + +0.9 694,317 - -0.4 694,347 - -0.1 694,456 + SO0676 0.14 +1.3 694,463 + SO0676 0.15 +0.9 694,464 - SO0676 0.16 +0.1 694,486 - SO0676 0.21 -0.3 694,492 - SO0676 0.22 -0.2 694,546 + SO0676 0.34 -0.0 694,546 + SO0676 0.34 +0.5 694,563 + SO0676 0.38 -0.2 694,563 + SO0676 0.38 +0.0 694,648 + SO0676 0.57 -0.6 694,738 + SO0676 0.77 -0.1 694,754 + SO0676 0.81 -0.4 694,785 - SO0676 0.87 +0.3 694,862 - +0.0 694,872 - -0.7 694,899 + SO0677 0.13 -0.5 694,899 + SO0677 0.13 -0.1 694,907 - SO0677 0.15 -0.8 694,907 - SO0677 0.15 -1.0 694,909 - SO0677 0.15 +1.0 694,921 + SO0677 0.18 +0.2 695,102 + SO0677 0.59 +1.0 695,102 + SO0677 0.59 -0.1 695,110 - SO0677 0.61 -0.1 695,110 - SO0677 0.61 -0.6 695,110 - SO0677 0.61 -0.1 695,157 + SO0677 0.71 +0.5 695,157 + SO0677 0.71 +1.0 695,182 - SO0677 0.77 +0.1 695,182 - SO0677 0.77 +0.3 695,266 + -0.3 695,280 - -0.3 695,322 + +1.3 695,322 + +0.1
Or see this region's nucleotide sequence