Experiment: Def Chlorate 40 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3164 and Psest_3165 are separated by 231 nucleotides Psest_3165 and Psest_3166 are separated by 93 nucleotides
Psest_3164: Psest_3164 - Predicted esterase, at 3,337,012 to 3,337,668
_3164
Psest_3165: Psest_3165 - diguanylate cyclase (GGDEF) domain, at 3,337,900 to 3,338,760
_3165
Psest_3166: Psest_3166 - Superfamily II DNA and RNA helicases, at 3,338,854 to 3,340,287
_3166
Position (kb)
3337
3338
3339 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3336.913 kb on + strand at 3337.214 kb on - strand, within Psest_3164 at 3337.214 kb on - strand, within Psest_3164 at 3337.432 kb on + strand, within Psest_3164 at 3337.433 kb on - strand, within Psest_3164 at 3337.433 kb on - strand, within Psest_3164 at 3337.433 kb on - strand, within Psest_3164 at 3337.433 kb on - strand, within Psest_3164 at 3337.523 kb on + strand, within Psest_3164 at 3337.524 kb on - strand, within Psest_3164 at 3337.559 kb on + strand, within Psest_3164 at 3337.559 kb on + strand, within Psest_3164 at 3337.559 kb on + strand, within Psest_3164 at 3337.559 kb on + strand, within Psest_3164 at 3337.560 kb on - strand, within Psest_3164 at 3337.695 kb on + strand at 3337.696 kb on - strand at 3337.696 kb on - strand at 3337.696 kb on - strand at 3337.702 kb on + strand at 3337.719 kb on + strand at 3337.720 kb on - strand at 3337.720 kb on - strand at 3337.971 kb on + strand at 3337.971 kb on + strand at 3337.971 kb on + strand at 3337.972 kb on - strand at 3337.972 kb on - strand at 3337.972 kb on - strand at 3337.972 kb on - strand at 3337.988 kb on + strand, within Psest_3165 at 3337.988 kb on + strand, within Psest_3165 at 3337.988 kb on + strand, within Psest_3165 at 3337.988 kb on + strand, within Psest_3165 at 3337.988 kb on + strand, within Psest_3165 at 3337.988 kb on + strand, within Psest_3165 at 3337.988 kb on + strand, within Psest_3165 at 3337.988 kb on + strand, within Psest_3165 at 3337.988 kb on + strand, within Psest_3165 at 3337.988 kb on + strand, within Psest_3165 at 3337.988 kb on + strand, within Psest_3165 at 3337.988 kb on + strand, within Psest_3165 at 3337.988 kb on + strand, within Psest_3165 at 3337.988 kb on + strand, within Psest_3165 at 3337.988 kb on + strand, within Psest_3165 at 3337.988 kb on + strand, within Psest_3165 at 3337.988 kb on + strand, within Psest_3165 at 3337.988 kb on + strand, within Psest_3165 at 3337.988 kb on + strand, within Psest_3165 at 3337.988 kb on + strand, within Psest_3165 at 3337.988 kb on + strand, within Psest_3165 at 3337.988 kb on + strand, within Psest_3165 at 3337.988 kb on + strand, within Psest_3165 at 3337.988 kb on + strand, within Psest_3165 at 3337.989 kb on - strand, within Psest_3165 at 3337.989 kb on - strand, within Psest_3165 at 3337.989 kb on - strand, within Psest_3165 at 3337.989 kb on - strand, within Psest_3165 at 3337.989 kb on - strand, within Psest_3165 at 3337.989 kb on - strand, within Psest_3165 at 3337.989 kb on - strand, within Psest_3165 at 3337.989 kb on - strand, within Psest_3165 at 3337.989 kb on - strand, within Psest_3165 at 3337.989 kb on - strand, within Psest_3165 at 3337.989 kb on - strand, within Psest_3165 at 3337.989 kb on - strand, within Psest_3165 at 3337.989 kb on - strand, within Psest_3165 at 3337.989 kb on - strand, within Psest_3165 at 3337.989 kb on - strand, within Psest_3165 at 3337.989 kb on - strand, within Psest_3165 at 3337.989 kb on - strand, within Psest_3165 at 3337.989 kb on - strand, within Psest_3165 at 3337.989 kb on - strand, within Psest_3165 at 3337.989 kb on - strand, within Psest_3165 at 3337.990 kb on + strand, within Psest_3165 at 3337.990 kb on + strand, within Psest_3165 at 3337.990 kb on + strand, within Psest_3165 at 3337.990 kb on + strand, within Psest_3165 at 3337.990 kb on + strand, within Psest_3165 at 3337.990 kb on + strand, within Psest_3165 at 3337.990 kb on + strand, within Psest_3165 at 3337.990 kb on + strand, within Psest_3165 at 3337.990 kb on + strand, within Psest_3165 at 3337.990 kb on + strand, within Psest_3165 at 3337.990 kb on + strand, within Psest_3165 at 3337.990 kb on + strand, within Psest_3165 at 3337.990 kb on + strand, within Psest_3165 at 3337.990 kb on + strand, within Psest_3165 at 3337.990 kb on + strand, within Psest_3165 at 3337.990 kb on + strand, within Psest_3165 at 3337.990 kb on + strand, within Psest_3165 at 3337.990 kb on + strand, within Psest_3165 at 3337.990 kb on + strand, within Psest_3165 at 3337.990 kb on + strand, within Psest_3165 at 3337.990 kb on + strand, within Psest_3165 at 3337.990 kb on + strand, within Psest_3165 at 3337.990 kb on + strand, within Psest_3165 at 3337.990 kb on + strand, within Psest_3165 at 3337.990 kb on + strand, within Psest_3165 at 3337.990 kb on + strand, within Psest_3165 at 3337.990 kb on + strand, within Psest_3165 at 3337.990 kb on + strand, within Psest_3165 at 3337.990 kb on + strand, within Psest_3165 at 3337.990 kb on + strand, within Psest_3165 at 3337.990 kb on + strand, within Psest_3165 at 3337.990 kb on + strand, within Psest_3165 at 3337.990 kb on + strand, within Psest_3165 at 3337.991 kb on - strand, within Psest_3165 at 3337.991 kb on - strand, within Psest_3165 at 3337.991 kb on - strand, within Psest_3165 at 3337.991 kb on - strand, within Psest_3165 at 3337.991 kb on - strand, within Psest_3165 at 3337.991 kb on - strand, within Psest_3165 at 3337.991 kb on - strand, within Psest_3165 at 3337.991 kb on - strand, within Psest_3165 at 3337.991 kb on - strand, within Psest_3165 at 3337.991 kb on - strand, within Psest_3165 at 3337.991 kb on - strand, within Psest_3165 at 3337.991 kb on - strand, within Psest_3165 at 3337.991 kb on - strand, within Psest_3165 at 3337.991 kb on - strand, within Psest_3165 at 3337.991 kb on - strand, within Psest_3165 at 3337.991 kb on - strand, within Psest_3165 at 3337.991 kb on - strand, within Psest_3165 at 3337.991 kb on - strand, within Psest_3165 at 3337.991 kb on - strand, within Psest_3165 at 3337.991 kb on - strand, within Psest_3165 at 3337.991 kb on - strand, within Psest_3165 at 3337.991 kb on - strand, within Psest_3165 at 3337.991 kb on - strand, within Psest_3165 at 3337.991 kb on - strand, within Psest_3165 at 3337.991 kb on - strand, within Psest_3165 at 3337.991 kb on - strand, within Psest_3165 at 3337.991 kb on - strand, within Psest_3165 at 3337.991 kb on - strand, within Psest_3165 at 3337.991 kb on - strand, within Psest_3165 at 3338.013 kb on - strand, within Psest_3165 at 3338.037 kb on + strand, within Psest_3165 at 3338.053 kb on + strand, within Psest_3165 at 3338.116 kb on + strand, within Psest_3165 at 3338.219 kb on + strand, within Psest_3165 at 3338.219 kb on + strand, within Psest_3165 at 3338.219 kb on + strand, within Psest_3165 at 3338.219 kb on + strand, within Psest_3165 at 3338.219 kb on + strand, within Psest_3165 at 3338.219 kb on + strand, within Psest_3165 at 3338.219 kb on + strand, within Psest_3165 at 3338.220 kb on - strand, within Psest_3165 at 3338.220 kb on - strand, within Psest_3165 at 3338.220 kb on - strand, within Psest_3165 at 3338.220 kb on - strand, within Psest_3165 at 3338.220 kb on - strand, within Psest_3165 at 3338.322 kb on + strand, within Psest_3165 at 3338.322 kb on + strand, within Psest_3165 at 3338.322 kb on + strand, within Psest_3165 at 3338.322 kb on + strand, within Psest_3165 at 3338.322 kb on + strand, within Psest_3165 at 3338.322 kb on + strand, within Psest_3165 at 3338.322 kb on + strand, within Psest_3165 at 3338.323 kb on - strand, within Psest_3165 at 3338.323 kb on - strand, within Psest_3165 at 3338.323 kb on - strand, within Psest_3165 at 3338.323 kb on - strand, within Psest_3165 at 3338.323 kb on - strand, within Psest_3165 at 3338.323 kb on - strand, within Psest_3165 at 3338.323 kb on - strand, within Psest_3165 at 3338.323 kb on - strand, within Psest_3165 at 3338.323 kb on - strand, within Psest_3165 at 3338.323 kb on - strand, within Psest_3165 at 3338.407 kb on + strand, within Psest_3165 at 3338.407 kb on + strand, within Psest_3165 at 3338.407 kb on + strand, within Psest_3165 at 3338.566 kb on - strand, within Psest_3165 at 3338.651 kb on + strand, within Psest_3165 at 3338.696 kb on + strand at 3338.696 kb on + strand at 3338.697 kb on - strand at 3338.697 kb on - strand at 3338.720 kb on - strand at 3338.720 kb on - strand at 3338.810 kb on + strand at 3338.810 kb on + strand at 3338.810 kb on + strand at 3338.811 kb on - strand at 3338.834 kb on - strand at 3338.834 kb on - strand at 3338.834 kb on - strand at 3338.877 kb on - strand at 3339.018 kb on + strand, within Psest_3166 at 3339.019 kb on - strand, within Psest_3166 at 3339.099 kb on - strand, within Psest_3166 at 3339.184 kb on + strand, within Psest_3166 at 3339.185 kb on - strand, within Psest_3166 at 3339.218 kb on - strand, within Psest_3166 at 3339.285 kb on + strand, within Psest_3166 at 3339.285 kb on + strand, within Psest_3166 at 3339.335 kb on - strand, within Psest_3166 at 3339.422 kb on - strand, within Psest_3166 at 3339.422 kb on - strand, within Psest_3166 at 3339.422 kb on - strand, within Psest_3166 at 3339.422 kb on - strand, within Psest_3166 at 3339.422 kb on - strand, within Psest_3166 at 3339.422 kb on - strand, within Psest_3166
Per-strain Table
Position Strand Gene LocusTag Fraction Def Chlorate 40 mM remove 3,336,913 + +0.1 3,337,214 - Psest_3164 0.31 -0.2 3,337,214 - Psest_3164 0.31 +0.1 3,337,432 + Psest_3164 0.64 -0.4 3,337,433 - Psest_3164 0.64 +0.5 3,337,433 - Psest_3164 0.64 +1.2 3,337,433 - Psest_3164 0.64 +0.3 3,337,433 - Psest_3164 0.64 +1.6 3,337,523 + Psest_3164 0.78 +0.5 3,337,524 - Psest_3164 0.78 -0.5 3,337,559 + Psest_3164 0.83 +0.8 3,337,559 + Psest_3164 0.83 -0.4 3,337,559 + Psest_3164 0.83 -0.1 3,337,559 + Psest_3164 0.83 +1.5 3,337,560 - Psest_3164 0.83 +0.1 3,337,695 + +0.4 3,337,696 - +1.3 3,337,696 - +0.7 3,337,696 - +1.1 3,337,702 + +0.4 3,337,719 + +0.4 3,337,720 - +0.4 3,337,720 - +0.4 3,337,971 + +1.5 3,337,971 + +2.0 3,337,971 + +0.3 3,337,972 - +0.5 3,337,972 - +1.3 3,337,972 - -0.7 3,337,972 - -1.5 3,337,988 + Psest_3165 0.10 +0.4 3,337,988 + Psest_3165 0.10 -0.2 3,337,988 + Psest_3165 0.10 -0.0 3,337,988 + Psest_3165 0.10 -1.6 3,337,988 + Psest_3165 0.10 -1.2 3,337,988 + Psest_3165 0.10 +0.3 3,337,988 + Psest_3165 0.10 +0.1 3,337,988 + Psest_3165 0.10 +0.4 3,337,988 + Psest_3165 0.10 +0.7 3,337,988 + Psest_3165 0.10 +0.5 3,337,988 + Psest_3165 0.10 -0.2 3,337,988 + Psest_3165 0.10 -0.7 3,337,988 + Psest_3165 0.10 +0.8 3,337,988 + Psest_3165 0.10 +0.2 3,337,988 + Psest_3165 0.10 +1.5 3,337,988 + Psest_3165 0.10 +0.0 3,337,988 + Psest_3165 0.10 -0.2 3,337,988 + Psest_3165 0.10 -0.3 3,337,988 + Psest_3165 0.10 +1.7 3,337,988 + Psest_3165 0.10 -1.1 3,337,988 + Psest_3165 0.10 -0.5 3,337,988 + Psest_3165 0.10 +0.8 3,337,988 + Psest_3165 0.10 +0.4 3,337,988 + Psest_3165 0.10 -0.1 3,337,989 - Psest_3165 0.10 -1.9 3,337,989 - Psest_3165 0.10 -0.8 3,337,989 - Psest_3165 0.10 +0.6 3,337,989 - Psest_3165 0.10 +0.7 3,337,989 - Psest_3165 0.10 -1.0 3,337,989 - Psest_3165 0.10 +1.0 3,337,989 - Psest_3165 0.10 +1.2 3,337,989 - Psest_3165 0.10 +0.3 3,337,989 - Psest_3165 0.10 -1.0 3,337,989 - Psest_3165 0.10 +1.1 3,337,989 - Psest_3165 0.10 +1.2 3,337,989 - Psest_3165 0.10 -0.7 3,337,989 - Psest_3165 0.10 +0.4 3,337,989 - Psest_3165 0.10 +0.5 3,337,989 - Psest_3165 0.10 +1.5 3,337,989 - Psest_3165 0.10 +0.4 3,337,989 - Psest_3165 0.10 -0.7 3,337,989 - Psest_3165 0.10 -0.2 3,337,989 - Psest_3165 0.10 +1.3 3,337,989 - Psest_3165 0.10 +2.3 3,337,990 + Psest_3165 0.10 +1.0 3,337,990 + Psest_3165 0.10 -2.8 3,337,990 + Psest_3165 0.10 +0.0 3,337,990 + Psest_3165 0.10 -0.7 3,337,990 + Psest_3165 0.10 +1.7 3,337,990 + Psest_3165 0.10 -0.5 3,337,990 + Psest_3165 0.10 +0.8 3,337,990 + Psest_3165 0.10 +0.4 3,337,990 + Psest_3165 0.10 -0.2 3,337,990 + Psest_3165 0.10 -1.2 3,337,990 + Psest_3165 0.10 +0.6 3,337,990 + Psest_3165 0.10 +0.6 3,337,990 + Psest_3165 0.10 -1.2 3,337,990 + Psest_3165 0.10 +0.2 3,337,990 + Psest_3165 0.10 +1.5 3,337,990 + Psest_3165 0.10 +0.6 3,337,990 + Psest_3165 0.10 -0.5 3,337,990 + Psest_3165 0.10 -1.2 3,337,990 + Psest_3165 0.10 +0.1 3,337,990 + Psest_3165 0.10 +1.1 3,337,990 + Psest_3165 0.10 +0.2 3,337,990 + Psest_3165 0.10 -0.3 3,337,990 + Psest_3165 0.10 +0.4 3,337,990 + Psest_3165 0.10 -1.4 3,337,990 + Psest_3165 0.10 +3.6 3,337,990 + Psest_3165 0.10 +0.6 3,337,990 + Psest_3165 0.10 +0.6 3,337,990 + Psest_3165 0.10 -1.3 3,337,990 + Psest_3165 0.10 +0.9 3,337,990 + Psest_3165 0.10 -0.0 3,337,990 + Psest_3165 0.10 -0.0 3,337,990 + Psest_3165 0.10 +0.0 3,337,990 + Psest_3165 0.10 +0.1 3,337,991 - Psest_3165 0.11 +1.1 3,337,991 - Psest_3165 0.11 -1.2 3,337,991 - Psest_3165 0.11 +0.5 3,337,991 - Psest_3165 0.11 -0.9 3,337,991 - Psest_3165 0.11 -0.6 3,337,991 - Psest_3165 0.11 +2.1 3,337,991 - Psest_3165 0.11 +0.6 3,337,991 - Psest_3165 0.11 +1.3 3,337,991 - Psest_3165 0.11 -1.2 3,337,991 - Psest_3165 0.11 -0.3 3,337,991 - Psest_3165 0.11 -0.7 3,337,991 - Psest_3165 0.11 -0.6 3,337,991 - Psest_3165 0.11 +0.7 3,337,991 - Psest_3165 0.11 +0.5 3,337,991 - Psest_3165 0.11 +1.5 3,337,991 - Psest_3165 0.11 -1.2 3,337,991 - Psest_3165 0.11 +0.1 3,337,991 - Psest_3165 0.11 +1.0 3,337,991 - Psest_3165 0.11 +0.1 3,337,991 - Psest_3165 0.11 +0.2 3,337,991 - Psest_3165 0.11 +1.3 3,337,991 - Psest_3165 0.11 +0.4 3,337,991 - Psest_3165 0.11 +0.8 3,337,991 - Psest_3165 0.11 +1.3 3,337,991 - Psest_3165 0.11 -1.2 3,337,991 - Psest_3165 0.11 -0.5 3,337,991 - Psest_3165 0.11 -0.3 3,337,991 - Psest_3165 0.11 -0.2 3,337,991 - Psest_3165 0.11 +0.4 3,338,013 - Psest_3165 0.13 -0.2 3,338,037 + Psest_3165 0.16 +1.0 3,338,053 + Psest_3165 0.18 +0.0 3,338,116 + Psest_3165 0.25 -0.3 3,338,219 + Psest_3165 0.37 +0.5 3,338,219 + Psest_3165 0.37 -0.7 3,338,219 + Psest_3165 0.37 -2.0 3,338,219 + Psest_3165 0.37 +0.6 3,338,219 + Psest_3165 0.37 +0.8 3,338,219 + Psest_3165 0.37 +0.9 3,338,219 + Psest_3165 0.37 -0.1 3,338,220 - Psest_3165 0.37 +1.2 3,338,220 - Psest_3165 0.37 -1.6 3,338,220 - Psest_3165 0.37 +0.2 3,338,220 - Psest_3165 0.37 -1.7 3,338,220 - Psest_3165 0.37 +0.6 3,338,322 + Psest_3165 0.49 +0.7 3,338,322 + Psest_3165 0.49 -0.4 3,338,322 + Psest_3165 0.49 +2.3 3,338,322 + Psest_3165 0.49 +0.8 3,338,322 + Psest_3165 0.49 +0.9 3,338,322 + Psest_3165 0.49 +0.2 3,338,322 + Psest_3165 0.49 -0.9 3,338,323 - Psest_3165 0.49 +1.4 3,338,323 - Psest_3165 0.49 +0.6 3,338,323 - Psest_3165 0.49 -1.4 3,338,323 - Psest_3165 0.49 +0.2 3,338,323 - Psest_3165 0.49 +0.8 3,338,323 - Psest_3165 0.49 -0.6 3,338,323 - Psest_3165 0.49 -1.9 3,338,323 - Psest_3165 0.49 +0.5 3,338,323 - Psest_3165 0.49 +0.3 3,338,323 - Psest_3165 0.49 +0.2 3,338,407 + Psest_3165 0.59 +0.8 3,338,407 + Psest_3165 0.59 +1.5 3,338,407 + Psest_3165 0.59 -0.1 3,338,566 - Psest_3165 0.77 +0.6 3,338,651 + Psest_3165 0.87 -0.4 3,338,696 + +1.6 3,338,696 + +0.6 3,338,697 - +0.8 3,338,697 - +0.4 3,338,720 - +0.3 3,338,720 - +0.7 3,338,810 + +1.8 3,338,810 + -0.7 3,338,810 + +1.0 3,338,811 - -0.5 3,338,834 - +0.5 3,338,834 - +0.1 3,338,834 - +0.8 3,338,877 - +0.1 3,339,018 + Psest_3166 0.11 +0.1 3,339,019 - Psest_3166 0.12 +0.9 3,339,099 - Psest_3166 0.17 -2.0 3,339,184 + Psest_3166 0.23 +0.0 3,339,185 - Psest_3166 0.23 +1.2 3,339,218 - Psest_3166 0.25 +0.8 3,339,285 + Psest_3166 0.30 +0.6 3,339,285 + Psest_3166 0.30 +0.2 3,339,335 - Psest_3166 0.34 +0.5 3,339,422 - Psest_3166 0.40 -0.6 3,339,422 - Psest_3166 0.40 +0.3 3,339,422 - Psest_3166 0.40 +1.5 3,339,422 - Psest_3166 0.40 +0.6 3,339,422 - Psest_3166 0.40 +0.7 3,339,422 - Psest_3166 0.40 +1.1
Or see this region's nucleotide sequence