Experiment: Def Chlorate 40 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2138 and Psest_2139 overlap by 4 nucleotides Psest_2139 and Psest_2140 are separated by 28 nucleotides
Psest_2138: Psest_2138 - RND family efflux transporter, MFP subunit, at 2,275,497 to 2,276,738
_2138
Psest_2139: Psest_2139 - Cation/multidrug efflux pump, at 2,276,735 to 2,279,815
_2139
Psest_2140: Psest_2140 - Cation/multidrug efflux pump, at 2,279,844 to 2,282,948
_2140
Position (kb)
2276
2277
2278
2279
2280 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2275.851 kb on + strand, within Psest_2138 at 2275.851 kb on + strand, within Psest_2138 at 2275.851 kb on + strand, within Psest_2138 at 2275.851 kb on + strand, within Psest_2138 at 2275.852 kb on - strand, within Psest_2138 at 2276.500 kb on - strand, within Psest_2138 at 2277.119 kb on + strand, within Psest_2139 at 2277.119 kb on + strand, within Psest_2139 at 2277.119 kb on + strand, within Psest_2139 at 2277.323 kb on + strand, within Psest_2139 at 2277.323 kb on + strand, within Psest_2139 at 2277.735 kb on + strand, within Psest_2139 at 2277.735 kb on + strand, within Psest_2139 at 2277.735 kb on + strand, within Psest_2139 at 2277.736 kb on - strand, within Psest_2139 at 2277.736 kb on - strand, within Psest_2139 at 2277.866 kb on + strand, within Psest_2139 at 2277.866 kb on + strand, within Psest_2139 at 2277.866 kb on + strand, within Psest_2139 at 2277.866 kb on + strand, within Psest_2139 at 2277.866 kb on + strand, within Psest_2139 at 2277.867 kb on - strand, within Psest_2139 at 2277.867 kb on - strand, within Psest_2139 at 2277.867 kb on - strand, within Psest_2139 at 2277.867 kb on - strand, within Psest_2139 at 2277.867 kb on - strand, within Psest_2139 at 2278.033 kb on + strand, within Psest_2139 at 2278.033 kb on + strand, within Psest_2139 at 2278.033 kb on + strand, within Psest_2139 at 2278.033 kb on + strand, within Psest_2139 at 2278.084 kb on - strand, within Psest_2139 at 2278.349 kb on + strand, within Psest_2139 at 2278.511 kb on + strand, within Psest_2139 at 2278.511 kb on + strand, within Psest_2139 at 2278.512 kb on - strand, within Psest_2139 at 2278.512 kb on - strand, within Psest_2139 at 2278.658 kb on + strand, within Psest_2139 at 2278.844 kb on + strand, within Psest_2139 at 2278.845 kb on - strand, within Psest_2139 at 2278.845 kb on - strand, within Psest_2139 at 2278.914 kb on - strand, within Psest_2139 at 2279.321 kb on + strand, within Psest_2139 at 2279.321 kb on + strand, within Psest_2139 at 2279.321 kb on + strand, within Psest_2139 at 2279.321 kb on + strand, within Psest_2139 at 2279.321 kb on + strand, within Psest_2139 at 2279.321 kb on + strand, within Psest_2139 at 2279.321 kb on + strand, within Psest_2139 at 2279.321 kb on + strand, within Psest_2139 at 2279.321 kb on + strand, within Psest_2139 at 2279.321 kb on + strand, within Psest_2139 at 2279.321 kb on + strand, within Psest_2139 at 2279.321 kb on + strand, within Psest_2139 at 2279.322 kb on - strand, within Psest_2139 at 2279.322 kb on - strand, within Psest_2139 at 2279.322 kb on - strand, within Psest_2139 at 2279.322 kb on - strand, within Psest_2139 at 2279.322 kb on - strand, within Psest_2139 at 2279.322 kb on - strand, within Psest_2139 at 2279.342 kb on + strand, within Psest_2139 at 2279.351 kb on + strand, within Psest_2139 at 2279.351 kb on + strand, within Psest_2139 at 2279.351 kb on + strand, within Psest_2139 at 2279.351 kb on + strand, within Psest_2139 at 2279.351 kb on + strand, within Psest_2139 at 2279.351 kb on + strand, within Psest_2139 at 2279.351 kb on + strand, within Psest_2139 at 2279.351 kb on + strand, within Psest_2139 at 2279.352 kb on - strand, within Psest_2139 at 2279.352 kb on - strand, within Psest_2139 at 2279.352 kb on - strand, within Psest_2139 at 2279.744 kb on + strand at 2279.865 kb on - strand at 2280.228 kb on + strand, within Psest_2140 at 2280.306 kb on + strand, within Psest_2140 at 2280.432 kb on + strand, within Psest_2140 at 2280.564 kb on + strand, within Psest_2140 at 2280.565 kb on - strand, within Psest_2140
Per-strain Table
Position Strand Gene LocusTag Fraction Def Chlorate 40 mM remove 2,275,851 + Psest_2138 0.29 +0.0 2,275,851 + Psest_2138 0.29 +1.0 2,275,851 + Psest_2138 0.29 -1.0 2,275,851 + Psest_2138 0.29 -0.0 2,275,852 - Psest_2138 0.29 -1.1 2,276,500 - Psest_2138 0.81 -0.2 2,277,119 + Psest_2139 0.12 -0.2 2,277,119 + Psest_2139 0.12 -0.6 2,277,119 + Psest_2139 0.12 -0.4 2,277,323 + Psest_2139 0.19 -1.4 2,277,323 + Psest_2139 0.19 +0.3 2,277,735 + Psest_2139 0.32 -0.3 2,277,735 + Psest_2139 0.32 -0.7 2,277,735 + Psest_2139 0.32 +0.3 2,277,736 - Psest_2139 0.32 +0.3 2,277,736 - Psest_2139 0.32 -0.6 2,277,866 + Psest_2139 0.37 +1.0 2,277,866 + Psest_2139 0.37 -1.1 2,277,866 + Psest_2139 0.37 +0.9 2,277,866 + Psest_2139 0.37 -0.6 2,277,866 + Psest_2139 0.37 -1.2 2,277,867 - Psest_2139 0.37 -1.1 2,277,867 - Psest_2139 0.37 -0.2 2,277,867 - Psest_2139 0.37 +0.4 2,277,867 - Psest_2139 0.37 -2.0 2,277,867 - Psest_2139 0.37 -1.0 2,278,033 + Psest_2139 0.42 +0.1 2,278,033 + Psest_2139 0.42 -1.0 2,278,033 + Psest_2139 0.42 -1.7 2,278,033 + Psest_2139 0.42 -0.1 2,278,084 - Psest_2139 0.44 +0.2 2,278,349 + Psest_2139 0.52 +1.0 2,278,511 + Psest_2139 0.58 -0.3 2,278,511 + Psest_2139 0.58 +0.9 2,278,512 - Psest_2139 0.58 +1.4 2,278,512 - Psest_2139 0.58 +0.5 2,278,658 + Psest_2139 0.62 -0.5 2,278,844 + Psest_2139 0.68 -1.3 2,278,845 - Psest_2139 0.68 +0.4 2,278,845 - Psest_2139 0.68 +0.0 2,278,914 - Psest_2139 0.71 +0.2 2,279,321 + Psest_2139 0.84 -0.2 2,279,321 + Psest_2139 0.84 -1.5 2,279,321 + Psest_2139 0.84 -0.2 2,279,321 + Psest_2139 0.84 -0.8 2,279,321 + Psest_2139 0.84 +0.6 2,279,321 + Psest_2139 0.84 -0.4 2,279,321 + Psest_2139 0.84 -0.4 2,279,321 + Psest_2139 0.84 +1.2 2,279,321 + Psest_2139 0.84 +0.3 2,279,321 + Psest_2139 0.84 +3.2 2,279,321 + Psest_2139 0.84 +1.1 2,279,321 + Psest_2139 0.84 +0.8 2,279,322 - Psest_2139 0.84 +0.2 2,279,322 - Psest_2139 0.84 +0.3 2,279,322 - Psest_2139 0.84 -1.4 2,279,322 - Psest_2139 0.84 +0.2 2,279,322 - Psest_2139 0.84 +0.1 2,279,322 - Psest_2139 0.84 +0.0 2,279,342 + Psest_2139 0.85 -0.4 2,279,351 + Psest_2139 0.85 +0.3 2,279,351 + Psest_2139 0.85 +0.4 2,279,351 + Psest_2139 0.85 -0.5 2,279,351 + Psest_2139 0.85 -0.2 2,279,351 + Psest_2139 0.85 -1.0 2,279,351 + Psest_2139 0.85 -0.1 2,279,351 + Psest_2139 0.85 +0.6 2,279,351 + Psest_2139 0.85 +0.6 2,279,352 - Psest_2139 0.85 -0.4 2,279,352 - Psest_2139 0.85 +0.8 2,279,352 - Psest_2139 0.85 +0.6 2,279,744 + +0.9 2,279,865 - +0.6 2,280,228 + Psest_2140 0.12 +1.0 2,280,306 + Psest_2140 0.15 -0.0 2,280,432 + Psest_2140 0.19 +1.3 2,280,564 + Psest_2140 0.23 +0.9 2,280,565 - Psest_2140 0.23 -1.2
Or see this region's nucleotide sequence