Experiment: Def Chlorate 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_4261 and Psest_4262 are separated by 201 nucleotides Psest_4262 and Psest_4263 overlap by 4 nucleotides Psest_4263 and Psest_4264 overlap by 4 nucleotides
Psest_4261: Psest_4261 - ABC-type multidrug transport system, permease component, at 4,450,353 to 4,451,480
_4261
Psest_4262: Psest_4262 - dTDP-glucose 4,6-dehydratase, at 4,451,682 to 4,452,752
_4262
Psest_4263: Psest_4263 - glucose-1-phosphate thymidylyltransferase, short form, at 4,452,749 to 4,453,621
_4263
Psest_4264: Psest_4264 - dTDP-4-dehydrorhamnose 3,5-epimerase, at 4,453,618 to 4,454,163
_4264
Position (kb)
4451
4452
4453 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4451.056 kb on + strand, within Psest_4261 at 4451.527 kb on + strand at 4451.549 kb on + strand at 4451.549 kb on + strand at 4451.549 kb on + strand at 4451.549 kb on + strand at 4451.549 kb on + strand at 4451.549 kb on + strand at 4451.549 kb on + strand at 4451.550 kb on - strand at 4451.550 kb on - strand at 4451.550 kb on - strand at 4451.550 kb on - strand at 4451.550 kb on - strand at 4451.550 kb on - strand at 4451.550 kb on - strand at 4451.550 kb on - strand at 4451.550 kb on - strand at 4451.550 kb on - strand at 4451.550 kb on - strand at 4451.550 kb on - strand at 4451.550 kb on - strand at 4451.553 kb on + strand at 4451.553 kb on + strand at 4451.553 kb on + strand at 4451.553 kb on + strand at 4451.553 kb on + strand at 4451.553 kb on + strand at 4451.553 kb on + strand at 4451.553 kb on + strand at 4451.553 kb on + strand at 4451.553 kb on + strand at 4451.553 kb on + strand at 4451.553 kb on + strand at 4451.554 kb on - strand at 4451.554 kb on - strand at 4451.554 kb on - strand at 4451.554 kb on - strand at 4451.554 kb on - strand at 4451.554 kb on - strand at 4451.554 kb on - strand at 4451.554 kb on - strand at 4451.554 kb on - strand at 4451.554 kb on - strand at 4451.554 kb on - strand at 4451.554 kb on - strand at 4451.554 kb on - strand at 4451.554 kb on - strand at 4451.554 kb on - strand at 4451.554 kb on - strand at 4451.554 kb on - strand at 4451.638 kb on + strand at 4451.638 kb on + strand at 4451.638 kb on + strand at 4452.714 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Def Chlorate 20 mM remove 4,451,056 + Psest_4261 0.62 -1.0 4,451,527 + -0.0 4,451,549 + +2.0 4,451,549 + +0.8 4,451,549 + +0.7 4,451,549 + +1.0 4,451,549 + -0.1 4,451,549 + +2.0 4,451,549 + -1.4 4,451,550 - +0.0 4,451,550 - +1.6 4,451,550 - -0.3 4,451,550 - +0.6 4,451,550 - +2.6 4,451,550 - -2.4 4,451,550 - +2.3 4,451,550 - +0.3 4,451,550 - +0.7 4,451,550 - -1.0 4,451,550 - -0.9 4,451,550 - -0.2 4,451,550 - +1.2 4,451,553 + +0.0 4,451,553 + +0.7 4,451,553 + +0.9 4,451,553 + +1.4 4,451,553 + +0.4 4,451,553 + +0.3 4,451,553 + -0.3 4,451,553 + +0.3 4,451,553 + +0.2 4,451,553 + +3.3 4,451,553 + +2.3 4,451,553 + -0.3 4,451,554 - +2.0 4,451,554 - +1.6 4,451,554 - +0.6 4,451,554 - +2.9 4,451,554 - +1.5 4,451,554 - +2.2 4,451,554 - -1.5 4,451,554 - -1.4 4,451,554 - +0.9 4,451,554 - -0.2 4,451,554 - -0.8 4,451,554 - +0.7 4,451,554 - +1.0 4,451,554 - +0.4 4,451,554 - +0.3 4,451,554 - +0.9 4,451,554 - -0.3 4,451,638 + +0.3 4,451,638 + +0.7 4,451,638 + -0.3 4,452,714 + -1.1
Or see this region's nucleotide sequence