Experiment: Def Chlorate 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2609 and Psest_2610 are separated by 53 nucleotides Psest_2610 and Psest_2611 are separated by 61 nucleotides
Psest_2609: Psest_2609 - Glycosyltransferase, at 2,792,358 to 2,793,461
_2609
Psest_2610: Psest_2610 - Predicted acyltransferases, at 2,793,515 to 2,794,552
_2610
Psest_2611: Psest_2611 - Glycosyltransferase, at 2,794,614 to 2,795,819
_2611
Position (kb)
2793
2794
2795 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2792.545 kb on + strand, within Psest_2609 at 2792.545 kb on + strand, within Psest_2609 at 2792.545 kb on + strand, within Psest_2609 at 2792.546 kb on - strand, within Psest_2609 at 2792.546 kb on - strand, within Psest_2609 at 2792.546 kb on - strand, within Psest_2609 at 2792.631 kb on + strand, within Psest_2609 at 2792.632 kb on - strand, within Psest_2609 at 2792.632 kb on - strand, within Psest_2609 at 2792.667 kb on + strand, within Psest_2609 at 2792.667 kb on + strand, within Psest_2609 at 2792.667 kb on + strand, within Psest_2609 at 2792.667 kb on + strand, within Psest_2609 at 2792.667 kb on + strand, within Psest_2609 at 2792.667 kb on + strand, within Psest_2609 at 2792.668 kb on - strand, within Psest_2609 at 2792.668 kb on - strand, within Psest_2609 at 2792.668 kb on - strand, within Psest_2609 at 2792.668 kb on - strand, within Psest_2609 at 2792.668 kb on - strand, within Psest_2609 at 2792.668 kb on - strand, within Psest_2609 at 2792.668 kb on - strand, within Psest_2609 at 2792.668 kb on - strand, within Psest_2609 at 2792.668 kb on - strand, within Psest_2609 at 2792.668 kb on - strand, within Psest_2609 at 2792.688 kb on + strand, within Psest_2609 at 2792.689 kb on - strand, within Psest_2609 at 2792.712 kb on + strand, within Psest_2609 at 2792.712 kb on + strand, within Psest_2609 at 2792.712 kb on + strand, within Psest_2609 at 2792.712 kb on + strand, within Psest_2609 at 2792.712 kb on + strand, within Psest_2609 at 2792.713 kb on - strand, within Psest_2609 at 2792.713 kb on - strand, within Psest_2609 at 2792.713 kb on - strand, within Psest_2609 at 2792.800 kb on - strand, within Psest_2609 at 2792.902 kb on + strand, within Psest_2609 at 2792.903 kb on - strand, within Psest_2609 at 2792.903 kb on - strand, within Psest_2609 at 2792.903 kb on - strand, within Psest_2609 at 2792.903 kb on - strand, within Psest_2609 at 2793.054 kb on - strand, within Psest_2609 at 2793.065 kb on + strand, within Psest_2609 at 2793.066 kb on - strand, within Psest_2609 at 2793.066 kb on - strand, within Psest_2609 at 2793.066 kb on - strand, within Psest_2609 at 2793.127 kb on + strand, within Psest_2609 at 2793.141 kb on + strand, within Psest_2609 at 2793.141 kb on + strand, within Psest_2609 at 2793.141 kb on + strand, within Psest_2609 at 2793.141 kb on + strand, within Psest_2609 at 2793.141 kb on + strand, within Psest_2609 at 2793.142 kb on - strand, within Psest_2609 at 2793.142 kb on - strand, within Psest_2609 at 2793.142 kb on - strand, within Psest_2609 at 2793.142 kb on - strand, within Psest_2609 at 2793.247 kb on - strand, within Psest_2609 at 2793.247 kb on - strand, within Psest_2609 at 2793.295 kb on + strand, within Psest_2609 at 2793.295 kb on + strand, within Psest_2609 at 2793.296 kb on - strand, within Psest_2609 at 2793.296 kb on - strand, within Psest_2609 at 2793.296 kb on - strand, within Psest_2609 at 2793.296 kb on - strand, within Psest_2609 at 2793.357 kb on + strand at 2793.561 kb on + strand at 2793.561 kb on + strand at 2793.562 kb on - strand at 2793.604 kb on + strand at 2793.759 kb on - strand, within Psest_2610 at 2793.759 kb on - strand, within Psest_2610 at 2793.896 kb on + strand, within Psest_2610 at 2793.896 kb on + strand, within Psest_2610 at 2793.897 kb on - strand, within Psest_2610 at 2793.897 kb on - strand, within Psest_2610 at 2794.080 kb on - strand, within Psest_2610 at 2794.106 kb on + strand, within Psest_2610 at 2794.107 kb on - strand, within Psest_2610 at 2794.107 kb on - strand, within Psest_2610 at 2794.107 kb on - strand, within Psest_2610 at 2794.130 kb on + strand, within Psest_2610 at 2794.131 kb on - strand, within Psest_2610 at 2794.140 kb on - strand, within Psest_2610 at 2794.140 kb on - strand, within Psest_2610 at 2794.140 kb on - strand, within Psest_2610 at 2794.155 kb on - strand, within Psest_2610 at 2794.155 kb on - strand, within Psest_2610 at 2794.167 kb on + strand, within Psest_2610 at 2794.167 kb on + strand, within Psest_2610 at 2794.168 kb on - strand, within Psest_2610 at 2794.168 kb on - strand, within Psest_2610 at 2794.176 kb on + strand, within Psest_2610 at 2794.176 kb on + strand, within Psest_2610 at 2794.176 kb on + strand, within Psest_2610 at 2794.177 kb on - strand, within Psest_2610 at 2794.177 kb on - strand, within Psest_2610 at 2794.177 kb on - strand, within Psest_2610 at 2794.232 kb on + strand, within Psest_2610 at 2794.232 kb on + strand, within Psest_2610 at 2794.233 kb on - strand, within Psest_2610 at 2794.233 kb on - strand, within Psest_2610 at 2794.320 kb on - strand, within Psest_2610 at 2794.328 kb on + strand, within Psest_2610 at 2794.328 kb on + strand, within Psest_2610 at 2794.329 kb on - strand, within Psest_2610 at 2794.329 kb on - strand, within Psest_2610 at 2794.332 kb on + strand, within Psest_2610 at 2794.332 kb on + strand, within Psest_2610 at 2794.332 kb on + strand, within Psest_2610 at 2794.332 kb on + strand, within Psest_2610 at 2794.332 kb on + strand, within Psest_2610 at 2794.332 kb on + strand, within Psest_2610 at 2794.332 kb on + strand, within Psest_2610 at 2794.333 kb on - strand, within Psest_2610 at 2794.333 kb on - strand, within Psest_2610 at 2794.333 kb on - strand, within Psest_2610 at 2794.333 kb on - strand, within Psest_2610 at 2794.333 kb on - strand, within Psest_2610 at 2794.333 kb on - strand, within Psest_2610 at 2794.333 kb on - strand, within Psest_2610 at 2794.333 kb on - strand, within Psest_2610 at 2794.333 kb on - strand, within Psest_2610 at 2794.333 kb on - strand, within Psest_2610 at 2794.333 kb on - strand, within Psest_2610 at 2794.543 kb on + strand at 2794.650 kb on + strand at 2794.650 kb on + strand at 2794.821 kb on + strand, within Psest_2611 at 2794.821 kb on + strand, within Psest_2611 at 2794.821 kb on + strand, within Psest_2611 at 2794.821 kb on + strand, within Psest_2611 at 2794.822 kb on - strand, within Psest_2611 at 2794.822 kb on - strand, within Psest_2611 at 2794.822 kb on - strand, within Psest_2611 at 2794.869 kb on + strand, within Psest_2611 at 2794.869 kb on + strand, within Psest_2611 at 2794.869 kb on + strand, within Psest_2611 at 2794.937 kb on + strand, within Psest_2611 at 2794.944 kb on + strand, within Psest_2611 at 2794.944 kb on + strand, within Psest_2611 at 2794.944 kb on + strand, within Psest_2611 at 2794.945 kb on - strand, within Psest_2611 at 2794.945 kb on - strand, within Psest_2611 at 2794.990 kb on - strand, within Psest_2611 at 2795.052 kb on + strand, within Psest_2611 at 2795.052 kb on + strand, within Psest_2611 at 2795.052 kb on + strand, within Psest_2611 at 2795.052 kb on + strand, within Psest_2611 at 2795.052 kb on + strand, within Psest_2611 at 2795.052 kb on + strand, within Psest_2611 at 2795.052 kb on + strand, within Psest_2611 at 2795.052 kb on + strand, within Psest_2611 at 2795.052 kb on + strand, within Psest_2611 at 2795.052 kb on + strand, within Psest_2611 at 2795.052 kb on + strand, within Psest_2611 at 2795.053 kb on - strand, within Psest_2611 at 2795.053 kb on - strand, within Psest_2611 at 2795.053 kb on - strand, within Psest_2611 at 2795.053 kb on - strand, within Psest_2611 at 2795.053 kb on - strand, within Psest_2611 at 2795.053 kb on - strand, within Psest_2611 at 2795.053 kb on - strand, within Psest_2611 at 2795.053 kb on - strand, within Psest_2611 at 2795.053 kb on - strand, within Psest_2611 at 2795.053 kb on - strand, within Psest_2611 at 2795.053 kb on - strand, within Psest_2611 at 2795.053 kb on - strand, within Psest_2611 at 2795.166 kb on + strand, within Psest_2611 at 2795.167 kb on - strand, within Psest_2611 at 2795.167 kb on - strand, within Psest_2611 at 2795.220 kb on + strand, within Psest_2611 at 2795.220 kb on + strand, within Psest_2611 at 2795.220 kb on + strand, within Psest_2611 at 2795.220 kb on + strand, within Psest_2611 at 2795.221 kb on - strand, within Psest_2611 at 2795.221 kb on - strand, within Psest_2611 at 2795.221 kb on - strand, within Psest_2611 at 2795.221 kb on - strand, within Psest_2611 at 2795.223 kb on - strand, within Psest_2611
Per-strain Table
Position Strand Gene LocusTag Fraction Def Chlorate 20 mM remove 2,792,545 + Psest_2609 0.17 -0.5 2,792,545 + Psest_2609 0.17 +0.0 2,792,545 + Psest_2609 0.17 +0.4 2,792,546 - Psest_2609 0.17 -0.1 2,792,546 - Psest_2609 0.17 +0.3 2,792,546 - Psest_2609 0.17 -0.3 2,792,631 + Psest_2609 0.25 -0.0 2,792,632 - Psest_2609 0.25 +0.7 2,792,632 - Psest_2609 0.25 -0.3 2,792,667 + Psest_2609 0.28 -0.3 2,792,667 + Psest_2609 0.28 -1.0 2,792,667 + Psest_2609 0.28 -0.4 2,792,667 + Psest_2609 0.28 -0.2 2,792,667 + Psest_2609 0.28 -0.5 2,792,667 + Psest_2609 0.28 +0.8 2,792,668 - Psest_2609 0.28 -0.4 2,792,668 - Psest_2609 0.28 -0.9 2,792,668 - Psest_2609 0.28 +0.3 2,792,668 - Psest_2609 0.28 +0.4 2,792,668 - Psest_2609 0.28 -1.0 2,792,668 - Psest_2609 0.28 -0.4 2,792,668 - Psest_2609 0.28 +1.2 2,792,668 - Psest_2609 0.28 +0.2 2,792,668 - Psest_2609 0.28 +0.2 2,792,668 - Psest_2609 0.28 -0.9 2,792,688 + Psest_2609 0.30 -0.5 2,792,689 - Psest_2609 0.30 -0.6 2,792,712 + Psest_2609 0.32 +0.4 2,792,712 + Psest_2609 0.32 -0.1 2,792,712 + Psest_2609 0.32 -0.8 2,792,712 + Psest_2609 0.32 +0.0 2,792,712 + Psest_2609 0.32 -0.1 2,792,713 - Psest_2609 0.32 +0.5 2,792,713 - Psest_2609 0.32 -1.0 2,792,713 - Psest_2609 0.32 -0.1 2,792,800 - Psest_2609 0.40 -0.5 2,792,902 + Psest_2609 0.49 +0.5 2,792,903 - Psest_2609 0.49 -0.0 2,792,903 - Psest_2609 0.49 +2.1 2,792,903 - Psest_2609 0.49 +0.7 2,792,903 - Psest_2609 0.49 -1.2 2,793,054 - Psest_2609 0.63 +0.7 2,793,065 + Psest_2609 0.64 +0.7 2,793,066 - Psest_2609 0.64 -0.4 2,793,066 - Psest_2609 0.64 -0.7 2,793,066 - Psest_2609 0.64 +0.8 2,793,127 + Psest_2609 0.70 +0.3 2,793,141 + Psest_2609 0.71 -0.7 2,793,141 + Psest_2609 0.71 +0.3 2,793,141 + Psest_2609 0.71 -0.4 2,793,141 + Psest_2609 0.71 +0.7 2,793,141 + Psest_2609 0.71 +0.5 2,793,142 - Psest_2609 0.71 -0.0 2,793,142 - Psest_2609 0.71 -0.8 2,793,142 - Psest_2609 0.71 +0.3 2,793,142 - Psest_2609 0.71 +0.6 2,793,247 - Psest_2609 0.81 -0.5 2,793,247 - Psest_2609 0.81 +0.3 2,793,295 + Psest_2609 0.85 +0.2 2,793,295 + Psest_2609 0.85 +0.3 2,793,296 - Psest_2609 0.85 -0.5 2,793,296 - Psest_2609 0.85 +0.8 2,793,296 - Psest_2609 0.85 +1.0 2,793,296 - Psest_2609 0.85 +0.2 2,793,357 + +1.5 2,793,561 + +2.1 2,793,561 + -0.3 2,793,562 - +0.4 2,793,604 + -1.5 2,793,759 - Psest_2610 0.24 +0.3 2,793,759 - Psest_2610 0.24 -1.5 2,793,896 + Psest_2610 0.37 -0.6 2,793,896 + Psest_2610 0.37 +1.2 2,793,897 - Psest_2610 0.37 -1.7 2,793,897 - Psest_2610 0.37 -0.3 2,794,080 - Psest_2610 0.54 +2.1 2,794,106 + Psest_2610 0.57 +0.8 2,794,107 - Psest_2610 0.57 +0.1 2,794,107 - Psest_2610 0.57 +0.4 2,794,107 - Psest_2610 0.57 +0.2 2,794,130 + Psest_2610 0.59 +0.5 2,794,131 - Psest_2610 0.59 +0.6 2,794,140 - Psest_2610 0.60 -0.8 2,794,140 - Psest_2610 0.60 -0.3 2,794,140 - Psest_2610 0.60 +1.1 2,794,155 - Psest_2610 0.62 -0.3 2,794,155 - Psest_2610 0.62 +0.1 2,794,167 + Psest_2610 0.63 +0.3 2,794,167 + Psest_2610 0.63 +1.1 2,794,168 - Psest_2610 0.63 +0.9 2,794,168 - Psest_2610 0.63 -0.5 2,794,176 + Psest_2610 0.64 -0.8 2,794,176 + Psest_2610 0.64 -1.8 2,794,176 + Psest_2610 0.64 +0.7 2,794,177 - Psest_2610 0.64 -0.1 2,794,177 - Psest_2610 0.64 -1.1 2,794,177 - Psest_2610 0.64 +1.1 2,794,232 + Psest_2610 0.69 +1.0 2,794,232 + Psest_2610 0.69 +1.0 2,794,233 - Psest_2610 0.69 +0.5 2,794,233 - Psest_2610 0.69 -0.0 2,794,320 - Psest_2610 0.78 -0.1 2,794,328 + Psest_2610 0.78 -0.5 2,794,328 + Psest_2610 0.78 -0.1 2,794,329 - Psest_2610 0.78 -1.3 2,794,329 - Psest_2610 0.78 -1.7 2,794,332 + Psest_2610 0.79 +1.0 2,794,332 + Psest_2610 0.79 +1.8 2,794,332 + Psest_2610 0.79 +1.5 2,794,332 + Psest_2610 0.79 +1.3 2,794,332 + Psest_2610 0.79 +1.8 2,794,332 + Psest_2610 0.79 +0.6 2,794,332 + Psest_2610 0.79 +2.3 2,794,333 - Psest_2610 0.79 +0.9 2,794,333 - Psest_2610 0.79 -0.4 2,794,333 - Psest_2610 0.79 +0.4 2,794,333 - Psest_2610 0.79 -0.4 2,794,333 - Psest_2610 0.79 -1.1 2,794,333 - Psest_2610 0.79 -0.1 2,794,333 - Psest_2610 0.79 -0.4 2,794,333 - Psest_2610 0.79 +0.5 2,794,333 - Psest_2610 0.79 +0.8 2,794,333 - Psest_2610 0.79 +0.5 2,794,333 - Psest_2610 0.79 +0.7 2,794,543 + +0.2 2,794,650 + -0.9 2,794,650 + +0.8 2,794,821 + Psest_2611 0.17 +0.8 2,794,821 + Psest_2611 0.17 -0.5 2,794,821 + Psest_2611 0.17 -0.2 2,794,821 + Psest_2611 0.17 -1.0 2,794,822 - Psest_2611 0.17 -0.0 2,794,822 - Psest_2611 0.17 -1.1 2,794,822 - Psest_2611 0.17 -0.5 2,794,869 + Psest_2611 0.21 +0.5 2,794,869 + Psest_2611 0.21 -2.1 2,794,869 + Psest_2611 0.21 +0.0 2,794,937 + Psest_2611 0.27 +1.2 2,794,944 + Psest_2611 0.27 -0.0 2,794,944 + Psest_2611 0.27 +0.2 2,794,944 + Psest_2611 0.27 -0.7 2,794,945 - Psest_2611 0.27 -0.8 2,794,945 - Psest_2611 0.27 -0.8 2,794,990 - Psest_2611 0.31 -1.2 2,795,052 + Psest_2611 0.36 +1.2 2,795,052 + Psest_2611 0.36 +0.2 2,795,052 + Psest_2611 0.36 -0.2 2,795,052 + Psest_2611 0.36 -1.1 2,795,052 + Psest_2611 0.36 -0.8 2,795,052 + Psest_2611 0.36 +0.3 2,795,052 + Psest_2611 0.36 +1.1 2,795,052 + Psest_2611 0.36 -0.2 2,795,052 + Psest_2611 0.36 -0.4 2,795,052 + Psest_2611 0.36 -0.1 2,795,052 + Psest_2611 0.36 +0.0 2,795,053 - Psest_2611 0.36 -1.9 2,795,053 - Psest_2611 0.36 -1.7 2,795,053 - Psest_2611 0.36 -2.3 2,795,053 - Psest_2611 0.36 -0.0 2,795,053 - Psest_2611 0.36 -0.5 2,795,053 - Psest_2611 0.36 +0.2 2,795,053 - Psest_2611 0.36 +1.0 2,795,053 - Psest_2611 0.36 -0.3 2,795,053 - Psest_2611 0.36 -1.5 2,795,053 - Psest_2611 0.36 +0.6 2,795,053 - Psest_2611 0.36 +2.0 2,795,053 - Psest_2611 0.36 -0.2 2,795,166 + Psest_2611 0.46 -0.6 2,795,167 - Psest_2611 0.46 -1.3 2,795,167 - Psest_2611 0.46 +0.2 2,795,220 + Psest_2611 0.50 -1.1 2,795,220 + Psest_2611 0.50 +1.1 2,795,220 + Psest_2611 0.50 -1.0 2,795,220 + Psest_2611 0.50 +1.8 2,795,221 - Psest_2611 0.50 +0.5 2,795,221 - Psest_2611 0.50 +2.0 2,795,221 - Psest_2611 0.50 -0.1 2,795,221 - Psest_2611 0.50 -0.9 2,795,223 - Psest_2611 0.50 +0.5
Or see this region's nucleotide sequence