Experiment: Def Chlorate 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2495 and Psest_2496 are separated by 10 nucleotides Psest_2496 and Psest_2497 are separated by 3 nucleotides Psest_2497 and Psest_2498 overlap by 7 nucleotides
Psest_2495: Psest_2495 - succinate dehydrogenase and fumarate reductase iron-sulfur protein, at 2,671,401 to 2,672,105
_2495
Psest_2496: Psest_2496 - succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup, at 2,672,116 to 2,673,888
_2496
Psest_2497: Psest_2497 - succinate dehydrogenase, hydrophobic membrane anchor protein, at 2,673,892 to 2,674,260
_2497
Psest_2498: Psest_2498 - succinate dehydrogenase, cytochrome b556 subunit, at 2,674,254 to 2,674,628
_2498
Position (kb)
2672
2673
2674 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2671.347 kb on - strand at 2674.728 kb on - strand at 2674.764 kb on - strand at 2674.766 kb on - strand at 2674.766 kb on - strand at 2674.774 kb on - strand at 2674.774 kb on - strand at 2674.774 kb on - strand at 2674.774 kb on - strand at 2674.827 kb on - strand at 2674.827 kb on - strand at 2674.827 kb on - strand at 2674.827 kb on - strand at 2674.827 kb on - strand at 2674.827 kb on - strand at 2674.827 kb on - strand at 2674.827 kb on - strand at 2674.829 kb on - strand at 2674.829 kb on - strand at 2674.829 kb on - strand at 2674.829 kb on - strand at 2674.830 kb on + strand at 2674.830 kb on + strand at 2674.830 kb on + strand at 2674.830 kb on + strand at 2674.831 kb on - strand at 2674.831 kb on - strand at 2674.831 kb on - strand at 2674.831 kb on - strand at 2674.831 kb on - strand at 2674.831 kb on - strand at 2674.831 kb on - strand at 2674.831 kb on - strand at 2674.831 kb on - strand at 2674.831 kb on - strand at 2674.831 kb on - strand at 2674.831 kb on - strand at 2674.831 kb on - strand at 2674.831 kb on - strand at 2674.831 kb on - strand at 2674.831 kb on - strand at 2674.860 kb on - strand at 2674.860 kb on - strand at 2674.860 kb on - strand at 2674.860 kb on - strand at 2674.884 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Def Chlorate 20 mM remove 2,671,347 - -2.5 2,674,728 - -1.1 2,674,764 - -2.1 2,674,766 - -0.6 2,674,766 - -0.0 2,674,774 - +0.0 2,674,774 - -0.3 2,674,774 - -0.4 2,674,774 - -0.4 2,674,827 - +1.5 2,674,827 - +2.0 2,674,827 - -0.5 2,674,827 - -2.5 2,674,827 - +0.7 2,674,827 - +2.3 2,674,827 - -0.3 2,674,827 - -0.2 2,674,829 - +1.3 2,674,829 - +0.9 2,674,829 - +0.1 2,674,829 - +0.8 2,674,830 + -1.0 2,674,830 + -0.8 2,674,830 + -0.3 2,674,830 + -0.5 2,674,831 - -0.9 2,674,831 - +2.0 2,674,831 - +0.1 2,674,831 - +1.6 2,674,831 - +1.0 2,674,831 - +0.0 2,674,831 - +0.7 2,674,831 - +0.8 2,674,831 - +1.3 2,674,831 - +0.7 2,674,831 - +0.5 2,674,831 - +0.8 2,674,831 - +0.8 2,674,831 - +1.0 2,674,831 - +0.8 2,674,831 - +0.3 2,674,860 - -0.5 2,674,860 - -0.1 2,674,860 - +1.3 2,674,860 - +1.6 2,674,884 - -1.3
Or see this region's nucleotide sequence