Experiment: Def Chlorate 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1342 and Psest_1343 are separated by 16 nucleotides Psest_1343 and Psest_1344 are separated by 230 nucleotides Psest_1344 and Psest_1345 are separated by 11 nucleotides
Psest_1342: Psest_1342 - Protein kinase domain., at 1,452,573 to 1,454,126
_1342
Psest_1343: Psest_1343 - Serine/threonine protein phosphatase, at 1,454,143 to 1,454,919
_1343
Psest_1344: Psest_1344 - rRNA methylases, at 1,455,150 to 1,455,881
_1344
Psest_1345: Psest_1345 - Uncharacterized FAD-dependent dehydrogenases, at 1,455,893 to 1,457,530
_1345
Position (kb)
1454
1455 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1453.162 kb on + strand, within Psest_1342 at 1453.163 kb on - strand, within Psest_1342 at 1453.178 kb on - strand, within Psest_1342 at 1453.178 kb on - strand, within Psest_1342 at 1453.423 kb on + strand, within Psest_1342 at 1453.552 kb on + strand, within Psest_1342 at 1453.552 kb on + strand, within Psest_1342 at 1453.552 kb on + strand, within Psest_1342 at 1453.552 kb on + strand, within Psest_1342 at 1453.552 kb on + strand, within Psest_1342 at 1453.552 kb on + strand, within Psest_1342 at 1453.552 kb on + strand, within Psest_1342 at 1453.553 kb on - strand, within Psest_1342 at 1453.553 kb on - strand, within Psest_1342 at 1453.553 kb on - strand, within Psest_1342 at 1453.606 kb on + strand, within Psest_1342 at 1453.861 kb on + strand, within Psest_1342 at 1453.861 kb on + strand, within Psest_1342 at 1453.861 kb on + strand, within Psest_1342 at 1453.861 kb on + strand, within Psest_1342 at 1453.861 kb on + strand, within Psest_1342 at 1453.861 kb on + strand, within Psest_1342 at 1453.861 kb on + strand, within Psest_1342 at 1453.862 kb on - strand, within Psest_1342 at 1453.862 kb on - strand, within Psest_1342 at 1453.877 kb on - strand, within Psest_1342 at 1454.004 kb on + strand at 1454.004 kb on + strand at 1454.005 kb on - strand at 1454.017 kb on - strand at 1454.126 kb on + strand at 1454.847 kb on + strand at 1454.847 kb on + strand at 1454.885 kb on + strand at 1455.034 kb on + strand at 1455.034 kb on + strand at 1455.049 kb on - strand at 1455.151 kb on + strand at 1455.166 kb on + strand at 1455.166 kb on + strand at 1455.166 kb on + strand at 1455.402 kb on + strand, within Psest_1344 at 1455.402 kb on + strand, within Psest_1344 at 1455.402 kb on + strand, within Psest_1344 at 1455.402 kb on + strand, within Psest_1344 at 1455.402 kb on + strand, within Psest_1344 at 1455.402 kb on + strand, within Psest_1344 at 1455.403 kb on - strand, within Psest_1344 at 1455.403 kb on - strand, within Psest_1344 at 1455.403 kb on - strand, within Psest_1344 at 1455.552 kb on + strand, within Psest_1344 at 1455.552 kb on + strand, within Psest_1344 at 1455.553 kb on - strand, within Psest_1344 at 1455.553 kb on - strand, within Psest_1344 at 1455.553 kb on - strand, within Psest_1344 at 1455.565 kb on + strand, within Psest_1344 at 1455.565 kb on + strand, within Psest_1344 at 1455.565 kb on + strand, within Psest_1344 at 1455.565 kb on + strand, within Psest_1344 at 1455.565 kb on + strand, within Psest_1344 at 1455.565 kb on + strand, within Psest_1344 at 1455.566 kb on - strand, within Psest_1344 at 1455.566 kb on - strand, within Psest_1344 at 1455.566 kb on - strand, within Psest_1344 at 1455.566 kb on - strand, within Psest_1344 at 1455.566 kb on - strand, within Psest_1344 at 1455.624 kb on + strand, within Psest_1344 at 1455.739 kb on + strand, within Psest_1344 at 1455.739 kb on + strand, within Psest_1344 at 1455.739 kb on + strand, within Psest_1344 at 1455.739 kb on + strand, within Psest_1344 at 1455.739 kb on + strand, within Psest_1344 at 1455.739 kb on + strand, within Psest_1344 at 1455.739 kb on + strand, within Psest_1344 at 1455.739 kb on + strand, within Psest_1344 at 1455.740 kb on - strand, within Psest_1344 at 1455.740 kb on - strand, within Psest_1344 at 1455.740 kb on - strand, within Psest_1344 at 1455.740 kb on - strand, within Psest_1344 at 1455.740 kb on - strand, within Psest_1344 at 1455.740 kb on - strand, within Psest_1344 at 1455.740 kb on - strand, within Psest_1344
Per-strain Table
Position Strand Gene LocusTag Fraction Def Chlorate 20 mM remove 1,453,162 + Psest_1342 0.38 -0.9 1,453,163 - Psest_1342 0.38 +1.1 1,453,178 - Psest_1342 0.39 +2.1 1,453,178 - Psest_1342 0.39 +0.5 1,453,423 + Psest_1342 0.55 -1.1 1,453,552 + Psest_1342 0.63 -1.8 1,453,552 + Psest_1342 0.63 -0.8 1,453,552 + Psest_1342 0.63 -0.9 1,453,552 + Psest_1342 0.63 +0.9 1,453,552 + Psest_1342 0.63 -0.5 1,453,552 + Psest_1342 0.63 -0.2 1,453,552 + Psest_1342 0.63 -0.9 1,453,553 - Psest_1342 0.63 +0.6 1,453,553 - Psest_1342 0.63 +0.2 1,453,553 - Psest_1342 0.63 +2.1 1,453,606 + Psest_1342 0.66 -0.5 1,453,861 + Psest_1342 0.83 +0.2 1,453,861 + Psest_1342 0.83 +0.2 1,453,861 + Psest_1342 0.83 -0.2 1,453,861 + Psest_1342 0.83 -0.9 1,453,861 + Psest_1342 0.83 +0.5 1,453,861 + Psest_1342 0.83 -0.9 1,453,861 + Psest_1342 0.83 +0.1 1,453,862 - Psest_1342 0.83 -0.7 1,453,862 - Psest_1342 0.83 -0.3 1,453,877 - Psest_1342 0.84 +3.1 1,454,004 + +0.5 1,454,004 + +0.5 1,454,005 - -0.8 1,454,017 - -1.3 1,454,126 + +0.3 1,454,847 + -1.6 1,454,847 + -0.3 1,454,885 + +0.1 1,455,034 + -1.5 1,455,034 + -0.1 1,455,049 - +0.3 1,455,151 + -0.8 1,455,166 + +0.2 1,455,166 + -0.4 1,455,166 + -0.2 1,455,402 + Psest_1344 0.34 -0.2 1,455,402 + Psest_1344 0.34 +1.1 1,455,402 + Psest_1344 0.34 -0.3 1,455,402 + Psest_1344 0.34 -0.0 1,455,402 + Psest_1344 0.34 -0.9 1,455,402 + Psest_1344 0.34 -1.5 1,455,403 - Psest_1344 0.35 +0.8 1,455,403 - Psest_1344 0.35 +0.1 1,455,403 - Psest_1344 0.35 -1.0 1,455,552 + Psest_1344 0.55 -1.2 1,455,552 + Psest_1344 0.55 -0.9 1,455,553 - Psest_1344 0.55 +0.2 1,455,553 - Psest_1344 0.55 -1.3 1,455,553 - Psest_1344 0.55 +2.1 1,455,565 + Psest_1344 0.57 +0.1 1,455,565 + Psest_1344 0.57 -2.1 1,455,565 + Psest_1344 0.57 -1.0 1,455,565 + Psest_1344 0.57 -1.0 1,455,565 + Psest_1344 0.57 -0.2 1,455,565 + Psest_1344 0.57 +0.9 1,455,566 - Psest_1344 0.57 -0.2 1,455,566 - Psest_1344 0.57 -1.0 1,455,566 - Psest_1344 0.57 +0.1 1,455,566 - Psest_1344 0.57 -1.0 1,455,566 - Psest_1344 0.57 -0.4 1,455,624 + Psest_1344 0.65 -0.4 1,455,739 + Psest_1344 0.80 -0.4 1,455,739 + Psest_1344 0.80 -1.2 1,455,739 + Psest_1344 0.80 -0.7 1,455,739 + Psest_1344 0.80 -1.1 1,455,739 + Psest_1344 0.80 -1.3 1,455,739 + Psest_1344 0.80 -0.8 1,455,739 + Psest_1344 0.80 -1.8 1,455,739 + Psest_1344 0.80 -1.7 1,455,740 - Psest_1344 0.81 -0.7 1,455,740 - Psest_1344 0.81 -0.2 1,455,740 - Psest_1344 0.81 -0.9 1,455,740 - Psest_1344 0.81 -1.8 1,455,740 - Psest_1344 0.81 -0.5 1,455,740 - Psest_1344 0.81 -0.2 1,455,740 - Psest_1344 0.81 -0.3
Or see this region's nucleotide sequence