Experiment: L-Histidine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SO0774 and SO0775 are separated by 302 nucleotides SO0775 and SO0776 are separated by 321 nucleotides SO0776 and ubiH are separated by 107 nucleotides
SO0774: SO0774 - 5-formyltetrahydrofolate cyclo-ligase family protein (NCBI ptt file), at 786,827 to 787,501
SO0774
SO0775: SO0775 - conserved hypothetical protein (NCBI ptt file), at 787,804 to 788,106
SO0775
SO0776: SO0776 - conserved hypothetical protein (NCBI ptt file), at 788,428 to 788,907
SO0776
SO0777: ubiH - 2-octaprenyl-6-methoxyphenol hydroxylase (NCBI ptt file), at 789,015 to 790,238
ubiH
Position (kb) 788
789 Strain fitness (log2 ratio) -2
-1
0
1 at 787.469 kb on - strand at 787.541 kb on - strand at 787.577 kb on + strand at 787.605 kb on - strand at 787.665 kb on - strand at 787.750 kb on - strand at 787.750 kb on - strand at 787.775 kb on + strand at 787.777 kb on + strand at 787.777 kb on + strand at 787.777 kb on + strand at 787.796 kb on + strand at 787.804 kb on - strand at 787.854 kb on + strand, within SO0775 at 788.001 kb on + strand, within SO0775 at 788.060 kb on + strand, within SO0775 at 788.135 kb on - strand at 788.146 kb on + strand at 788.146 kb on + strand at 788.146 kb on + strand at 788.154 kb on - strand at 788.154 kb on - strand at 788.154 kb on - strand at 788.154 kb on - strand at 788.195 kb on - strand at 788.258 kb on - strand at 788.269 kb on - strand at 788.275 kb on + strand at 788.308 kb on + strand at 788.446 kb on + strand at 788.447 kb on + strand at 788.447 kb on + strand at 788.493 kb on + strand, within SO0776 at 788.521 kb on + strand, within SO0776 at 788.521 kb on + strand, within SO0776 at 789.011 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (N) remove 787,469 - +0.5 787,541 - -0.8 787,577 + -0.7 787,605 - -0.7 787,665 - -0.2 787,750 - +0.2 787,750 - -2.1 787,775 + -1.5 787,777 + +0.4 787,777 + -1.3 787,777 + +0.3 787,796 + -0.3 787,804 - -0.6 787,854 + SO0775 0.17 +0.6 788,001 + SO0775 0.65 +1.5 788,060 + SO0775 0.84 +0.2 788,135 - +0.0 788,146 + +0.9 788,146 + +1.7 788,146 + -0.0 788,154 - +0.4 788,154 - -0.5 788,154 - +0.4 788,154 - -0.1 788,195 - -0.9 788,258 - +0.6 788,269 - -1.0 788,275 + -1.4 788,308 + +0.1 788,446 + -1.0 788,447 + +0.3 788,447 + -1.2 788,493 + SO0776 0.14 -0.7 788,521 + SO0776 0.19 -0.6 788,521 + SO0776 0.19 -1.1 789,011 + -0.2
Or see this region's nucleotide sequence