Experiment: Def Cisplatin 0.0002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0721 and Psest_0722 are separated by 91 nucleotides Psest_0722 and Psest_0723 are separated by 153 nucleotides
Psest_0721: Psest_0721 - tryptophanyl-tRNA synthetase, at 789,941 to 791,299
_0721
Psest_0722: Psest_0722 - Predicted ATPase, at 791,391 to 792,563
_0722
Psest_0723: Psest_0723 - Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain, at 792,717 to 793,706
_0723
Position (kb) 791
792
793 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 791.405 kb on + strand at 791.565 kb on + strand, within Psest_0722 at 791.565 kb on + strand, within Psest_0722 at 791.655 kb on + strand, within Psest_0722 at 791.655 kb on + strand, within Psest_0722 at 791.655 kb on + strand, within Psest_0722 at 791.655 kb on + strand, within Psest_0722 at 791.655 kb on + strand, within Psest_0722 at 791.655 kb on + strand, within Psest_0722 at 791.655 kb on + strand, within Psest_0722 at 791.655 kb on + strand, within Psest_0722 at 791.655 kb on + strand, within Psest_0722 at 791.656 kb on - strand, within Psest_0722 at 791.656 kb on - strand, within Psest_0722 at 791.656 kb on - strand, within Psest_0722 at 791.656 kb on - strand, within Psest_0722 at 791.656 kb on - strand, within Psest_0722 at 791.688 kb on + strand, within Psest_0722 at 791.700 kb on - strand, within Psest_0722 at 791.976 kb on + strand, within Psest_0722 at 791.976 kb on + strand, within Psest_0722 at 791.977 kb on - strand, within Psest_0722 at 791.977 kb on - strand, within Psest_0722 at 792.300 kb on + strand, within Psest_0722 at 792.300 kb on + strand, within Psest_0722 at 792.300 kb on + strand, within Psest_0722 at 792.300 kb on + strand, within Psest_0722 at 792.300 kb on + strand, within Psest_0722 at 792.301 kb on - strand, within Psest_0722 at 792.301 kb on - strand, within Psest_0722 at 792.301 kb on - strand, within Psest_0722 at 792.301 kb on - strand, within Psest_0722 at 792.301 kb on - strand, within Psest_0722 at 792.301 kb on - strand, within Psest_0722 at 792.301 kb on - strand, within Psest_0722 at 792.301 kb on - strand, within Psest_0722 at 792.412 kb on - strand, within Psest_0722 at 792.465 kb on + strand at 792.465 kb on + strand at 792.465 kb on + strand at 792.465 kb on + strand at 792.466 kb on - strand at 792.466 kb on - strand at 792.538 kb on - strand at 792.650 kb on - strand at 792.719 kb on - strand at 792.733 kb on + strand at 792.820 kb on + strand, within Psest_0723 at 792.820 kb on + strand, within Psest_0723 at 792.820 kb on + strand, within Psest_0723 at 792.820 kb on + strand, within Psest_0723 at 792.821 kb on - strand, within Psest_0723 at 792.821 kb on - strand, within Psest_0723 at 792.891 kb on + strand, within Psest_0723 at 792.891 kb on + strand, within Psest_0723 at 792.891 kb on + strand, within Psest_0723 at 792.892 kb on - strand, within Psest_0723 at 792.892 kb on - strand, within Psest_0723 at 792.892 kb on - strand, within Psest_0723 at 792.892 kb on - strand, within Psest_0723 at 792.892 kb on - strand, within Psest_0723 at 792.892 kb on - strand, within Psest_0723 at 792.896 kb on - strand, within Psest_0723 at 792.896 kb on - strand, within Psest_0723 at 792.896 kb on - strand, within Psest_0723 at 793.088 kb on - strand, within Psest_0723 at 793.165 kb on + strand, within Psest_0723 at 793.165 kb on + strand, within Psest_0723 at 793.165 kb on + strand, within Psest_0723 at 793.165 kb on + strand, within Psest_0723 at 793.166 kb on - strand, within Psest_0723 at 793.166 kb on - strand, within Psest_0723 at 793.166 kb on - strand, within Psest_0723 at 793.166 kb on - strand, within Psest_0723 at 793.166 kb on - strand, within Psest_0723 at 793.171 kb on + strand, within Psest_0723 at 793.171 kb on + strand, within Psest_0723 at 793.171 kb on + strand, within Psest_0723 at 793.171 kb on + strand, within Psest_0723 at 793.171 kb on + strand, within Psest_0723 at 793.171 kb on + strand, within Psest_0723 at 793.171 kb on + strand, within Psest_0723 at 793.171 kb on + strand, within Psest_0723 at 793.171 kb on + strand, within Psest_0723 at 793.171 kb on + strand, within Psest_0723 at 793.171 kb on + strand, within Psest_0723 at 793.171 kb on + strand, within Psest_0723 at 793.171 kb on + strand, within Psest_0723 at 793.171 kb on + strand, within Psest_0723 at 793.171 kb on + strand, within Psest_0723 at 793.171 kb on + strand, within Psest_0723 at 793.171 kb on + strand, within Psest_0723 at 793.171 kb on + strand, within Psest_0723 at 793.172 kb on - strand, within Psest_0723 at 793.172 kb on - strand, within Psest_0723 at 793.172 kb on - strand, within Psest_0723 at 793.172 kb on - strand, within Psest_0723 at 793.172 kb on - strand, within Psest_0723 at 793.172 kb on - strand, within Psest_0723 at 793.208 kb on - strand, within Psest_0723
Per-strain Table
Position Strand Gene LocusTag Fraction Def Cisplatin 0.0002 mg/ml remove 791,405 + +0.1 791,565 + Psest_0722 0.15 -0.9 791,565 + Psest_0722 0.15 -2.9 791,655 + Psest_0722 0.23 -0.6 791,655 + Psest_0722 0.23 -1.4 791,655 + Psest_0722 0.23 -0.9 791,655 + Psest_0722 0.23 -1.1 791,655 + Psest_0722 0.23 -0.1 791,655 + Psest_0722 0.23 -1.2 791,655 + Psest_0722 0.23 -1.2 791,655 + Psest_0722 0.23 -1.0 791,655 + Psest_0722 0.23 -0.2 791,656 - Psest_0722 0.23 -2.8 791,656 - Psest_0722 0.23 -1.6 791,656 - Psest_0722 0.23 -1.9 791,656 - Psest_0722 0.23 -1.0 791,656 - Psest_0722 0.23 +0.3 791,688 + Psest_0722 0.25 -2.0 791,700 - Psest_0722 0.26 -1.0 791,976 + Psest_0722 0.50 +0.4 791,976 + Psest_0722 0.50 -0.5 791,977 - Psest_0722 0.50 -0.2 791,977 - Psest_0722 0.50 -0.8 792,300 + Psest_0722 0.77 -2.0 792,300 + Psest_0722 0.77 -2.5 792,300 + Psest_0722 0.77 -1.8 792,300 + Psest_0722 0.77 -1.7 792,300 + Psest_0722 0.77 -1.1 792,301 - Psest_0722 0.78 +0.0 792,301 - Psest_0722 0.78 -1.5 792,301 - Psest_0722 0.78 -0.6 792,301 - Psest_0722 0.78 -2.6 792,301 - Psest_0722 0.78 -3.9 792,301 - Psest_0722 0.78 -1.0 792,301 - Psest_0722 0.78 -1.0 792,301 - Psest_0722 0.78 +0.6 792,412 - Psest_0722 0.87 -0.4 792,465 + -2.6 792,465 + -1.3 792,465 + -2.4 792,465 + -1.6 792,466 - -2.3 792,466 - +0.4 792,538 - -1.8 792,650 - +0.0 792,719 - -0.1 792,733 + +0.4 792,820 + Psest_0723 0.10 +0.1 792,820 + Psest_0723 0.10 -0.2 792,820 + Psest_0723 0.10 -0.7 792,820 + Psest_0723 0.10 +0.0 792,821 - Psest_0723 0.11 -1.3 792,821 - Psest_0723 0.11 +0.2 792,891 + Psest_0723 0.18 -0.1 792,891 + Psest_0723 0.18 -0.1 792,891 + Psest_0723 0.18 -0.9 792,892 - Psest_0723 0.18 -1.0 792,892 - Psest_0723 0.18 +1.7 792,892 - Psest_0723 0.18 -0.6 792,892 - Psest_0723 0.18 -2.7 792,892 - Psest_0723 0.18 -0.3 792,892 - Psest_0723 0.18 +0.3 792,896 - Psest_0723 0.18 -0.6 792,896 - Psest_0723 0.18 -1.0 792,896 - Psest_0723 0.18 +0.1 793,088 - Psest_0723 0.37 +0.3 793,165 + Psest_0723 0.45 -0.4 793,165 + Psest_0723 0.45 +1.9 793,165 + Psest_0723 0.45 -1.0 793,165 + Psest_0723 0.45 -0.6 793,166 - Psest_0723 0.45 +0.3 793,166 - Psest_0723 0.45 +0.2 793,166 - Psest_0723 0.45 +0.8 793,166 - Psest_0723 0.45 +0.8 793,166 - Psest_0723 0.45 +0.2 793,171 + Psest_0723 0.46 +0.8 793,171 + Psest_0723 0.46 -0.1 793,171 + Psest_0723 0.46 +0.7 793,171 + Psest_0723 0.46 +0.3 793,171 + Psest_0723 0.46 -0.6 793,171 + Psest_0723 0.46 -0.1 793,171 + Psest_0723 0.46 -0.7 793,171 + Psest_0723 0.46 -0.2 793,171 + Psest_0723 0.46 +0.7 793,171 + Psest_0723 0.46 -2.3 793,171 + Psest_0723 0.46 -0.2 793,171 + Psest_0723 0.46 +0.4 793,171 + Psest_0723 0.46 -0.1 793,171 + Psest_0723 0.46 +0.0 793,171 + Psest_0723 0.46 +0.3 793,171 + Psest_0723 0.46 -0.3 793,171 + Psest_0723 0.46 -1.0 793,171 + Psest_0723 0.46 -0.6 793,172 - Psest_0723 0.46 +0.3 793,172 - Psest_0723 0.46 -0.4 793,172 - Psest_0723 0.46 -0.2 793,172 - Psest_0723 0.46 -0.5 793,172 - Psest_0723 0.46 +0.3 793,172 - Psest_0723 0.46 -1.3 793,208 - Psest_0723 0.50 +0.2
Or see this region's nucleotide sequence