Experiment: Def Cisplatin 0.0002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_4302 and Psest_4303 are separated by 76 nucleotides Psest_4303 and Psest_4304 overlap by 4 nucleotides
Psest_4302: Psest_4302 - hypothetical protein, at 4,499,602 to 4,500,738
_4302
Psest_4303: Psest_4303 - HEAT repeat., at 4,500,815 to 4,501,852
_4303
Psest_4304: Psest_4304 - Glycosyltransferases, probably involved in cell wall biogenesis, at 4,501,849 to 4,503,249
_4304
Position (kb)
4500
4501
4502 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 4499.821 kb on + strand, within Psest_4302 at 4499.822 kb on - strand, within Psest_4302 at 4500.133 kb on + strand, within Psest_4302 at 4500.133 kb on + strand, within Psest_4302 at 4500.133 kb on + strand, within Psest_4302 at 4500.134 kb on - strand, within Psest_4302 at 4500.134 kb on - strand, within Psest_4302 at 4500.134 kb on - strand, within Psest_4302 at 4500.290 kb on - strand, within Psest_4302 at 4500.290 kb on - strand, within Psest_4302 at 4500.290 kb on - strand, within Psest_4302 at 4500.290 kb on - strand, within Psest_4302 at 4500.290 kb on - strand, within Psest_4302 at 4500.424 kb on + strand, within Psest_4302 at 4500.449 kb on - strand, within Psest_4302 at 4500.514 kb on + strand, within Psest_4302 at 4500.514 kb on + strand, within Psest_4302 at 4500.514 kb on + strand, within Psest_4302 at 4500.515 kb on - strand, within Psest_4302 at 4500.515 kb on - strand, within Psest_4302 at 4500.515 kb on - strand, within Psest_4302 at 4500.517 kb on + strand, within Psest_4302 at 4500.517 kb on + strand, within Psest_4302 at 4500.517 kb on + strand, within Psest_4302 at 4500.517 kb on + strand, within Psest_4302 at 4500.517 kb on + strand, within Psest_4302 at 4500.517 kb on + strand, within Psest_4302 at 4500.517 kb on + strand, within Psest_4302 at 4500.518 kb on - strand, within Psest_4302 at 4500.518 kb on - strand, within Psest_4302 at 4500.518 kb on - strand, within Psest_4302 at 4500.518 kb on - strand, within Psest_4302 at 4500.518 kb on - strand, within Psest_4302 at 4500.518 kb on - strand, within Psest_4302 at 4500.520 kb on + strand, within Psest_4302 at 4500.535 kb on + strand, within Psest_4302 at 4500.535 kb on + strand, within Psest_4302 at 4500.535 kb on + strand, within Psest_4302 at 4500.536 kb on - strand, within Psest_4302 at 4500.691 kb on + strand at 4500.691 kb on + strand at 4500.691 kb on + strand at 4500.691 kb on + strand at 4500.692 kb on - strand at 4500.692 kb on - strand at 4500.694 kb on + strand at 4500.694 kb on + strand at 4500.694 kb on + strand at 4500.833 kb on + strand at 4500.833 kb on + strand at 4500.833 kb on + strand at 4500.834 kb on - strand at 4500.834 kb on - strand at 4500.834 kb on - strand at 4500.834 kb on - strand at 4500.834 kb on - strand at 4500.858 kb on + strand at 4500.858 kb on + strand at 4500.871 kb on - strand at 4500.882 kb on + strand at 4500.882 kb on + strand at 4500.882 kb on + strand at 4500.883 kb on - strand at 4500.954 kb on - strand, within Psest_4303 at 4501.224 kb on + strand, within Psest_4303 at 4501.894 kb on + strand at 4501.918 kb on + strand at 4501.918 kb on + strand at 4501.918 kb on + strand at 4501.918 kb on + strand at 4501.918 kb on + strand at 4501.918 kb on + strand at 4501.918 kb on + strand at 4501.918 kb on + strand at 4501.918 kb on + strand at 4501.918 kb on + strand at 4501.918 kb on + strand at 4501.918 kb on + strand at 4501.918 kb on + strand at 4501.919 kb on - strand at 4501.919 kb on - strand at 4501.919 kb on - strand at 4501.919 kb on - strand at 4501.919 kb on - strand at 4501.919 kb on - strand at 4501.919 kb on - strand at 4501.919 kb on - strand at 4501.919 kb on - strand at 4501.919 kb on - strand at 4501.919 kb on - strand at 4501.919 kb on - strand at 4501.919 kb on - strand at 4501.919 kb on - strand at 4501.919 kb on - strand at 4501.919 kb on - strand at 4501.960 kb on + strand at 4501.960 kb on + strand at 4501.960 kb on + strand at 4501.960 kb on + strand at 4501.999 kb on + strand, within Psest_4304 at 4502.030 kb on + strand, within Psest_4304 at 4502.031 kb on - strand, within Psest_4304 at 4502.233 kb on + strand, within Psest_4304 at 4502.233 kb on + strand, within Psest_4304 at 4502.234 kb on - strand, within Psest_4304 at 4502.234 kb on - strand, within Psest_4304 at 4502.387 kb on + strand, within Psest_4304 at 4502.387 kb on + strand, within Psest_4304 at 4502.463 kb on - strand, within Psest_4304 at 4502.530 kb on + strand, within Psest_4304 at 4502.531 kb on - strand, within Psest_4304 at 4502.656 kb on - strand, within Psest_4304
Per-strain Table
Position Strand Gene LocusTag Fraction Def Cisplatin 0.0002 mg/ml remove 4,499,821 + Psest_4302 0.19 +1.4 4,499,822 - Psest_4302 0.19 -1.6 4,500,133 + Psest_4302 0.47 +1.5 4,500,133 + Psest_4302 0.47 -0.5 4,500,133 + Psest_4302 0.47 +0.6 4,500,134 - Psest_4302 0.47 +2.1 4,500,134 - Psest_4302 0.47 -1.9 4,500,134 - Psest_4302 0.47 +1.1 4,500,290 - Psest_4302 0.61 +0.3 4,500,290 - Psest_4302 0.61 +1.1 4,500,290 - Psest_4302 0.61 -0.5 4,500,290 - Psest_4302 0.61 +1.1 4,500,290 - Psest_4302 0.61 +1.1 4,500,424 + Psest_4302 0.72 -0.4 4,500,449 - Psest_4302 0.74 +0.1 4,500,514 + Psest_4302 0.80 -1.4 4,500,514 + Psest_4302 0.80 +0.6 4,500,514 + Psest_4302 0.80 +1.1 4,500,515 - Psest_4302 0.80 -0.5 4,500,515 - Psest_4302 0.80 +1.1 4,500,515 - Psest_4302 0.80 +0.1 4,500,517 + Psest_4302 0.80 -0.4 4,500,517 + Psest_4302 0.80 +0.3 4,500,517 + Psest_4302 0.80 +0.7 4,500,517 + Psest_4302 0.80 +1.6 4,500,517 + Psest_4302 0.80 +0.6 4,500,517 + Psest_4302 0.80 +1.5 4,500,517 + Psest_4302 0.80 +0.3 4,500,518 - Psest_4302 0.81 +2.1 4,500,518 - Psest_4302 0.81 -1.7 4,500,518 - Psest_4302 0.81 -1.3 4,500,518 - Psest_4302 0.81 +1.1 4,500,518 - Psest_4302 0.81 +0.1 4,500,518 - Psest_4302 0.81 +0.8 4,500,520 + Psest_4302 0.81 -0.9 4,500,535 + Psest_4302 0.82 +0.1 4,500,535 + Psest_4302 0.82 -1.3 4,500,535 + Psest_4302 0.82 +0.1 4,500,536 - Psest_4302 0.82 -0.2 4,500,691 + +0.6 4,500,691 + -1.5 4,500,691 + +2.1 4,500,691 + +0.1 4,500,692 - -0.5 4,500,692 - +0.1 4,500,694 + +0.1 4,500,694 + +0.1 4,500,694 + -0.5 4,500,833 + -0.2 4,500,833 + +0.1 4,500,833 + +1.1 4,500,834 - -0.4 4,500,834 - -0.1 4,500,834 - +1.4 4,500,834 - +0.5 4,500,834 - +0.5 4,500,858 + +0.6 4,500,858 + +1.1 4,500,871 - +0.6 4,500,882 + +2.1 4,500,882 + +0.1 4,500,882 + +0.9 4,500,883 - -0.5 4,500,954 - Psest_4303 0.13 -2.4 4,501,224 + Psest_4303 0.39 -0.5 4,501,894 + +0.6 4,501,918 + +0.4 4,501,918 + -0.9 4,501,918 + +0.8 4,501,918 + -0.3 4,501,918 + -0.7 4,501,918 + +0.3 4,501,918 + +0.9 4,501,918 + +2.1 4,501,918 + +3.9 4,501,918 + -0.4 4,501,918 + +1.1 4,501,918 + -0.1 4,501,918 + -0.5 4,501,919 - -0.5 4,501,919 - +0.1 4,501,919 - -0.3 4,501,919 - -0.5 4,501,919 - +0.1 4,501,919 - -0.2 4,501,919 - +1.1 4,501,919 - +0.8 4,501,919 - +1.6 4,501,919 - -0.9 4,501,919 - +0.1 4,501,919 - +1.1 4,501,919 - -0.9 4,501,919 - +0.1 4,501,919 - +0.9 4,501,919 - -1.5 4,501,960 + +0.5 4,501,960 + +0.4 4,501,960 + -0.5 4,501,960 + -0.7 4,501,999 + Psest_4304 0.11 +0.7 4,502,030 + Psest_4304 0.13 -0.9 4,502,031 - Psest_4304 0.13 +0.5 4,502,233 + Psest_4304 0.27 +1.1 4,502,233 + Psest_4304 0.27 +0.7 4,502,234 - Psest_4304 0.27 +0.3 4,502,234 - Psest_4304 0.27 +0.4 4,502,387 + Psest_4304 0.38 -0.3 4,502,387 + Psest_4304 0.38 -0.3 4,502,463 - Psest_4304 0.44 +0.0 4,502,530 + Psest_4304 0.49 +0.8 4,502,531 - Psest_4304 0.49 -0.9 4,502,656 - Psest_4304 0.58 +0.0
Or see this region's nucleotide sequence