Experiment: Def Cisplatin 0.0002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2328 and Psest_2329 are separated by 81 nucleotides Psest_2329 and Psest_2330 are separated by 169 nucleotides
Psest_2328: Psest_2328 - phosophoadenylyl-sulfate reductase (thioredoxin)/thioredoxin-dependent adenylylsulfate APS reductase, at 2,482,440 to 2,483,174
_2328
Psest_2329: Psest_2329 - Transcriptional regulator, at 2,483,256 to 2,484,230
_2329
Psest_2330: Psest_2330 - 2-dehydropantoate 2-reductase, at 2,484,400 to 2,485,356
_2330
Position (kb)
2483
2484
2485 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2482.323 kb on - strand at 2482.324 kb on + strand at 2482.351 kb on - strand at 2482.369 kb on + strand at 2482.369 kb on + strand at 2482.370 kb on - strand at 2482.370 kb on - strand at 2482.370 kb on - strand at 2482.370 kb on - strand at 2482.370 kb on - strand at 2482.373 kb on + strand at 2482.383 kb on + strand at 2482.425 kb on + strand at 2483.257 kb on + strand at 2483.258 kb on - strand at 2483.260 kb on + strand at 2483.260 kb on + strand at 2483.260 kb on + strand at 2483.261 kb on - strand at 2483.261 kb on - strand at 2483.496 kb on - strand, within Psest_2329 at 2483.533 kb on + strand, within Psest_2329 at 2483.533 kb on + strand, within Psest_2329 at 2483.533 kb on + strand, within Psest_2329 at 2483.533 kb on + strand, within Psest_2329 at 2483.533 kb on + strand, within Psest_2329 at 2483.533 kb on + strand, within Psest_2329 at 2483.533 kb on + strand, within Psest_2329 at 2483.533 kb on + strand, within Psest_2329 at 2483.533 kb on + strand, within Psest_2329 at 2483.533 kb on + strand, within Psest_2329 at 2483.534 kb on - strand, within Psest_2329 at 2483.534 kb on - strand, within Psest_2329 at 2483.534 kb on - strand, within Psest_2329 at 2483.534 kb on - strand, within Psest_2329 at 2483.534 kb on - strand, within Psest_2329 at 2483.534 kb on - strand, within Psest_2329 at 2483.534 kb on - strand, within Psest_2329 at 2483.534 kb on - strand, within Psest_2329 at 2483.534 kb on - strand, within Psest_2329 at 2483.534 kb on - strand, within Psest_2329 at 2483.534 kb on - strand, within Psest_2329 at 2483.534 kb on - strand, within Psest_2329 at 2483.534 kb on - strand, within Psest_2329 at 2483.534 kb on - strand, within Psest_2329 at 2483.610 kb on + strand, within Psest_2329 at 2483.611 kb on - strand, within Psest_2329 at 2483.611 kb on - strand, within Psest_2329 at 2483.641 kb on + strand, within Psest_2329 at 2483.641 kb on + strand, within Psest_2329 at 2483.641 kb on + strand, within Psest_2329 at 2483.641 kb on + strand, within Psest_2329 at 2483.641 kb on + strand, within Psest_2329 at 2483.641 kb on + strand, within Psest_2329 at 2483.641 kb on + strand, within Psest_2329 at 2483.641 kb on + strand, within Psest_2329 at 2483.641 kb on + strand, within Psest_2329 at 2483.642 kb on - strand, within Psest_2329 at 2483.642 kb on - strand, within Psest_2329 at 2483.642 kb on - strand, within Psest_2329 at 2483.642 kb on - strand, within Psest_2329 at 2483.642 kb on - strand, within Psest_2329 at 2483.642 kb on - strand, within Psest_2329 at 2483.642 kb on - strand, within Psest_2329 at 2483.642 kb on - strand, within Psest_2329 at 2483.855 kb on + strand, within Psest_2329 at 2483.855 kb on + strand, within Psest_2329 at 2483.855 kb on + strand, within Psest_2329 at 2483.855 kb on + strand, within Psest_2329 at 2483.856 kb on - strand, within Psest_2329 at 2483.856 kb on - strand, within Psest_2329 at 2483.856 kb on - strand, within Psest_2329 at 2483.856 kb on - strand, within Psest_2329 at 2483.856 kb on - strand, within Psest_2329 at 2483.856 kb on - strand, within Psest_2329 at 2483.856 kb on - strand, within Psest_2329 at 2483.856 kb on - strand, within Psest_2329 at 2483.856 kb on - strand, within Psest_2329 at 2483.875 kb on + strand, within Psest_2329 at 2483.876 kb on - strand, within Psest_2329 at 2483.876 kb on - strand, within Psest_2329 at 2484.149 kb on + strand at 2484.149 kb on + strand at 2484.149 kb on + strand at 2484.150 kb on - strand at 2484.208 kb on + strand at 2484.208 kb on + strand at 2484.208 kb on + strand at 2484.208 kb on + strand at 2484.208 kb on + strand at 2484.208 kb on + strand at 2484.209 kb on - strand at 2484.209 kb on - strand at 2484.209 kb on - strand at 2484.209 kb on - strand at 2484.230 kb on + strand at 2484.230 kb on + strand at 2484.231 kb on - strand at 2484.274 kb on + strand at 2484.274 kb on + strand at 2484.274 kb on + strand at 2484.274 kb on + strand at 2484.274 kb on + strand at 2484.274 kb on + strand at 2484.275 kb on - strand at 2484.275 kb on - strand at 2484.275 kb on - strand at 2484.275 kb on - strand at 2484.275 kb on - strand at 2484.275 kb on - strand at 2484.275 kb on - strand at 2484.276 kb on + strand at 2484.277 kb on - strand at 2484.305 kb on + strand at 2484.305 kb on + strand at 2484.306 kb on - strand at 2484.306 kb on - strand at 2484.441 kb on - strand at 2484.472 kb on + strand at 2484.473 kb on - strand at 2484.503 kb on + strand, within Psest_2330 at 2484.503 kb on + strand, within Psest_2330 at 2484.503 kb on + strand, within Psest_2330 at 2484.503 kb on + strand, within Psest_2330 at 2484.503 kb on + strand, within Psest_2330 at 2484.503 kb on + strand, within Psest_2330 at 2484.504 kb on - strand, within Psest_2330 at 2484.504 kb on - strand, within Psest_2330 at 2484.504 kb on - strand, within Psest_2330 at 2484.504 kb on - strand, within Psest_2330 at 2484.504 kb on - strand, within Psest_2330 at 2484.504 kb on - strand, within Psest_2330 at 2484.504 kb on - strand, within Psest_2330 at 2484.504 kb on - strand, within Psest_2330 at 2484.504 kb on - strand, within Psest_2330 at 2484.504 kb on - strand, within Psest_2330 at 2484.504 kb on - strand, within Psest_2330 at 2484.548 kb on + strand, within Psest_2330 at 2484.549 kb on - strand, within Psest_2330 at 2484.549 kb on - strand, within Psest_2330 at 2484.549 kb on - strand, within Psest_2330 at 2484.549 kb on - strand, within Psest_2330 at 2484.549 kb on - strand, within Psest_2330 at 2484.549 kb on - strand, within Psest_2330 at 2484.563 kb on + strand, within Psest_2330 at 2484.564 kb on - strand, within Psest_2330 at 2484.621 kb on + strand, within Psest_2330 at 2484.622 kb on - strand, within Psest_2330 at 2484.622 kb on - strand, within Psest_2330 at 2484.622 kb on - strand, within Psest_2330 at 2484.622 kb on - strand, within Psest_2330 at 2484.622 kb on - strand, within Psest_2330 at 2484.712 kb on - strand, within Psest_2330 at 2484.749 kb on - strand, within Psest_2330 at 2484.991 kb on - strand, within Psest_2330 at 2484.997 kb on + strand, within Psest_2330 at 2484.997 kb on + strand, within Psest_2330 at 2484.997 kb on + strand, within Psest_2330 at 2484.998 kb on - strand, within Psest_2330 at 2484.998 kb on - strand, within Psest_2330 at 2484.998 kb on - strand, within Psest_2330 at 2484.998 kb on - strand, within Psest_2330 at 2484.998 kb on - strand, within Psest_2330 at 2484.998 kb on - strand, within Psest_2330 at 2484.998 kb on - strand, within Psest_2330 at 2484.998 kb on - strand, within Psest_2330 at 2484.998 kb on - strand, within Psest_2330 at 2484.998 kb on - strand, within Psest_2330 at 2485.001 kb on + strand, within Psest_2330 at 2485.001 kb on + strand, within Psest_2330 at 2485.001 kb on + strand, within Psest_2330 at 2485.002 kb on - strand, within Psest_2330 at 2485.002 kb on - strand, within Psest_2330 at 2485.163 kb on + strand, within Psest_2330
Per-strain Table
Position Strand Gene LocusTag Fraction Def Cisplatin 0.0002 mg/ml remove 2,482,323 - -0.9 2,482,324 + -0.5 2,482,351 - -2.4 2,482,369 + -0.2 2,482,369 + -0.3 2,482,370 - -1.4 2,482,370 - -2.5 2,482,370 - -2.5 2,482,370 - -1.5 2,482,370 - -0.5 2,482,373 + -0.3 2,482,383 + +0.4 2,482,425 + +0.5 2,483,257 + +0.6 2,483,258 - -1.1 2,483,260 + +0.1 2,483,260 + -0.5 2,483,260 + +0.1 2,483,261 - +0.1 2,483,261 - +0.4 2,483,496 - Psest_2329 0.25 -3.0 2,483,533 + Psest_2329 0.28 -3.6 2,483,533 + Psest_2329 0.28 -1.8 2,483,533 + Psest_2329 0.28 -2.1 2,483,533 + Psest_2329 0.28 -2.5 2,483,533 + Psest_2329 0.28 -3.1 2,483,533 + Psest_2329 0.28 -3.1 2,483,533 + Psest_2329 0.28 -1.4 2,483,533 + Psest_2329 0.28 -3.0 2,483,533 + Psest_2329 0.28 -1.9 2,483,533 + Psest_2329 0.28 -4.1 2,483,534 - Psest_2329 0.29 -2.4 2,483,534 - Psest_2329 0.29 -3.6 2,483,534 - Psest_2329 0.29 -2.9 2,483,534 - Psest_2329 0.29 -2.9 2,483,534 - Psest_2329 0.29 -2.5 2,483,534 - Psest_2329 0.29 -1.4 2,483,534 - Psest_2329 0.29 -1.4 2,483,534 - Psest_2329 0.29 -3.5 2,483,534 - Psest_2329 0.29 -3.5 2,483,534 - Psest_2329 0.29 -3.2 2,483,534 - Psest_2329 0.29 -1.6 2,483,534 - Psest_2329 0.29 -1.7 2,483,534 - Psest_2329 0.29 -3.6 2,483,534 - Psest_2329 0.29 -2.6 2,483,610 + Psest_2329 0.36 -1.9 2,483,611 - Psest_2329 0.36 -2.8 2,483,611 - Psest_2329 0.36 -2.1 2,483,641 + Psest_2329 0.39 -2.3 2,483,641 + Psest_2329 0.39 -3.2 2,483,641 + Psest_2329 0.39 -1.9 2,483,641 + Psest_2329 0.39 -2.8 2,483,641 + Psest_2329 0.39 -2.1 2,483,641 + Psest_2329 0.39 -1.6 2,483,641 + Psest_2329 0.39 -3.5 2,483,641 + Psest_2329 0.39 -2.5 2,483,641 + Psest_2329 0.39 -2.0 2,483,642 - Psest_2329 0.40 -3.0 2,483,642 - Psest_2329 0.40 -0.2 2,483,642 - Psest_2329 0.40 -3.6 2,483,642 - Psest_2329 0.40 -1.7 2,483,642 - Psest_2329 0.40 -3.6 2,483,642 - Psest_2329 0.40 -3.1 2,483,642 - Psest_2329 0.40 -2.2 2,483,642 - Psest_2329 0.40 -2.4 2,483,855 + Psest_2329 0.61 -3.4 2,483,855 + Psest_2329 0.61 -2.5 2,483,855 + Psest_2329 0.61 -3.1 2,483,855 + Psest_2329 0.61 -4.0 2,483,856 - Psest_2329 0.62 -2.5 2,483,856 - Psest_2329 0.62 -3.6 2,483,856 - Psest_2329 0.62 -1.1 2,483,856 - Psest_2329 0.62 -1.6 2,483,856 - Psest_2329 0.62 -2.1 2,483,856 - Psest_2329 0.62 -1.5 2,483,856 - Psest_2329 0.62 -2.9 2,483,856 - Psest_2329 0.62 -4.2 2,483,856 - Psest_2329 0.62 -2.6 2,483,875 + Psest_2329 0.63 -4.0 2,483,876 - Psest_2329 0.64 -2.1 2,483,876 - Psest_2329 0.64 -3.0 2,484,149 + -1.2 2,484,149 + -3.5 2,484,149 + -2.0 2,484,150 - -4.4 2,484,208 + -2.5 2,484,208 + -0.1 2,484,208 + -2.5 2,484,208 + -2.5 2,484,208 + -1.6 2,484,208 + -3.1 2,484,209 - -4.2 2,484,209 - -4.1 2,484,209 - -2.4 2,484,209 - -2.8 2,484,230 + -0.9 2,484,230 + -3.6 2,484,231 - -1.1 2,484,274 + -0.6 2,484,274 + +0.2 2,484,274 + -0.5 2,484,274 + -0.5 2,484,274 + -0.1 2,484,274 + -1.9 2,484,275 - +0.1 2,484,275 - +0.6 2,484,275 - -0.7 2,484,275 - -0.4 2,484,275 - -0.3 2,484,275 - +0.0 2,484,275 - -0.1 2,484,276 + -2.0 2,484,277 - +0.5 2,484,305 + -1.6 2,484,305 + +0.4 2,484,306 - +0.2 2,484,306 - +0.0 2,484,441 - -0.4 2,484,472 + -0.0 2,484,473 - +0.1 2,484,503 + Psest_2330 0.11 -0.5 2,484,503 + Psest_2330 0.11 +1.6 2,484,503 + Psest_2330 0.11 -2.1 2,484,503 + Psest_2330 0.11 +0.0 2,484,503 + Psest_2330 0.11 +0.3 2,484,503 + Psest_2330 0.11 -0.6 2,484,504 - Psest_2330 0.11 -0.3 2,484,504 - Psest_2330 0.11 -2.4 2,484,504 - Psest_2330 0.11 -0.2 2,484,504 - Psest_2330 0.11 +0.7 2,484,504 - Psest_2330 0.11 +0.2 2,484,504 - Psest_2330 0.11 +0.8 2,484,504 - Psest_2330 0.11 -0.9 2,484,504 - Psest_2330 0.11 +0.5 2,484,504 - Psest_2330 0.11 +0.1 2,484,504 - Psest_2330 0.11 +0.5 2,484,504 - Psest_2330 0.11 -0.3 2,484,548 + Psest_2330 0.15 -0.6 2,484,549 - Psest_2330 0.16 -0.2 2,484,549 - Psest_2330 0.16 -0.8 2,484,549 - Psest_2330 0.16 -0.5 2,484,549 - Psest_2330 0.16 +0.1 2,484,549 - Psest_2330 0.16 -0.8 2,484,549 - Psest_2330 0.16 +0.8 2,484,563 + Psest_2330 0.17 -0.2 2,484,564 - Psest_2330 0.17 +0.2 2,484,621 + Psest_2330 0.23 +0.2 2,484,622 - Psest_2330 0.23 +0.0 2,484,622 - Psest_2330 0.23 -0.2 2,484,622 - Psest_2330 0.23 +0.8 2,484,622 - Psest_2330 0.23 -0.6 2,484,622 - Psest_2330 0.23 +1.4 2,484,712 - Psest_2330 0.33 -0.5 2,484,749 - Psest_2330 0.36 +0.3 2,484,991 - Psest_2330 0.62 -0.5 2,484,997 + Psest_2330 0.62 -0.6 2,484,997 + Psest_2330 0.62 -0.6 2,484,997 + Psest_2330 0.62 -0.1 2,484,998 - Psest_2330 0.62 +0.9 2,484,998 - Psest_2330 0.62 -0.3 2,484,998 - Psest_2330 0.62 +0.2 2,484,998 - Psest_2330 0.62 +0.7 2,484,998 - Psest_2330 0.62 -0.5 2,484,998 - Psest_2330 0.62 +0.0 2,484,998 - Psest_2330 0.62 -1.1 2,484,998 - Psest_2330 0.62 +0.4 2,484,998 - Psest_2330 0.62 +0.0 2,484,998 - Psest_2330 0.62 +1.2 2,485,001 + Psest_2330 0.63 -0.2 2,485,001 + Psest_2330 0.63 -0.5 2,485,001 + Psest_2330 0.63 +0.2 2,485,002 - Psest_2330 0.63 -0.6 2,485,002 - Psest_2330 0.63 +0.3 2,485,163 + Psest_2330 0.80 -0.1
Or see this region's nucleotide sequence