Experiment: Def Cisplatin 0.0002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2307 and Psest_2308 are separated by 33 nucleotides Psest_2308 and Psest_2309 are separated by 358 nucleotides
Psest_2307: Psest_2307 - Universal stress protein UspA and related nucleotide-binding proteins, at 2,457,318 to 2,458,178
_2307
Psest_2308: Psest_2308 - Predicted Fe-S protein, at 2,458,212 to 2,458,718
_2308
Psest_2309: Psest_2309 - aconitate hydratase 2, at 2,459,077 to 2,461,704
_2309
Position (kb)
2458
2459 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2457.214 kb on + strand at 2457.214 kb on + strand at 2457.214 kb on + strand at 2457.214 kb on + strand at 2457.215 kb on - strand at 2457.215 kb on - strand at 2457.215 kb on - strand at 2457.215 kb on - strand at 2457.215 kb on - strand at 2457.215 kb on - strand at 2457.215 kb on - strand at 2457.215 kb on - strand at 2457.251 kb on + strand at 2457.251 kb on + strand at 2457.251 kb on + strand at 2457.252 kb on - strand at 2457.252 kb on - strand at 2457.252 kb on - strand at 2457.252 kb on - strand at 2457.252 kb on - strand at 2457.252 kb on - strand at 2457.281 kb on - strand at 2457.281 kb on - strand at 2457.282 kb on + strand at 2457.282 kb on + strand at 2457.283 kb on - strand at 2457.283 kb on - strand at 2457.283 kb on - strand at 2457.686 kb on + strand, within Psest_2307 at 2457.686 kb on + strand, within Psest_2307 at 2457.687 kb on - strand, within Psest_2307 at 2457.829 kb on + strand, within Psest_2307 at 2457.829 kb on + strand, within Psest_2307 at 2457.829 kb on + strand, within Psest_2307 at 2457.884 kb on - strand, within Psest_2307 at 2457.961 kb on + strand, within Psest_2307 at 2457.961 kb on + strand, within Psest_2307 at 2457.961 kb on + strand, within Psest_2307 at 2457.961 kb on + strand, within Psest_2307 at 2457.961 kb on + strand, within Psest_2307 at 2457.961 kb on + strand, within Psest_2307 at 2457.961 kb on + strand, within Psest_2307 at 2457.962 kb on - strand, within Psest_2307 at 2457.962 kb on - strand, within Psest_2307 at 2457.962 kb on - strand, within Psest_2307 at 2457.962 kb on - strand, within Psest_2307 at 2457.962 kb on - strand, within Psest_2307 at 2457.962 kb on - strand, within Psest_2307 at 2457.962 kb on - strand, within Psest_2307 at 2457.965 kb on + strand, within Psest_2307 at 2457.966 kb on - strand, within Psest_2307 at 2458.016 kb on + strand, within Psest_2307 at 2458.017 kb on - strand, within Psest_2307 at 2458.036 kb on + strand, within Psest_2307 at 2458.037 kb on - strand, within Psest_2307 at 2458.082 kb on + strand, within Psest_2307 at 2458.412 kb on - strand, within Psest_2308 at 2458.574 kb on - strand, within Psest_2308 at 2458.688 kb on + strand at 2458.689 kb on - strand at 2458.689 kb on - strand at 2458.689 kb on - strand at 2458.751 kb on + strand at 2458.751 kb on + strand at 2458.751 kb on + strand at 2458.752 kb on - strand at 2458.752 kb on - strand at 2458.752 kb on - strand at 2458.752 kb on - strand at 2458.752 kb on - strand at 2458.809 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Def Cisplatin 0.0002 mg/ml remove 2,457,214 + -0.9 2,457,214 + -0.6 2,457,214 + -0.8 2,457,214 + -0.1 2,457,215 - +0.4 2,457,215 - -2.0 2,457,215 - -0.4 2,457,215 - -0.8 2,457,215 - -1.1 2,457,215 - +0.0 2,457,215 - +0.4 2,457,215 - -0.8 2,457,251 + -0.4 2,457,251 + -0.3 2,457,251 + -0.1 2,457,252 - -1.2 2,457,252 - +0.1 2,457,252 - +0.4 2,457,252 - -0.2 2,457,252 - +0.1 2,457,252 - -1.0 2,457,281 - -0.1 2,457,281 - -0.1 2,457,282 + +1.0 2,457,282 + -0.5 2,457,283 - +0.4 2,457,283 - -0.2 2,457,283 - -2.1 2,457,686 + Psest_2307 0.43 -0.1 2,457,686 + Psest_2307 0.43 +0.0 2,457,687 - Psest_2307 0.43 +0.7 2,457,829 + Psest_2307 0.59 +0.0 2,457,829 + Psest_2307 0.59 +0.5 2,457,829 + Psest_2307 0.59 -1.3 2,457,884 - Psest_2307 0.66 +0.3 2,457,961 + Psest_2307 0.75 +0.4 2,457,961 + Psest_2307 0.75 +1.8 2,457,961 + Psest_2307 0.75 -0.1 2,457,961 + Psest_2307 0.75 +0.1 2,457,961 + Psest_2307 0.75 -0.1 2,457,961 + Psest_2307 0.75 +0.7 2,457,961 + Psest_2307 0.75 -0.9 2,457,962 - Psest_2307 0.75 -0.1 2,457,962 - Psest_2307 0.75 -0.1 2,457,962 - Psest_2307 0.75 -0.8 2,457,962 - Psest_2307 0.75 +0.4 2,457,962 - Psest_2307 0.75 -0.4 2,457,962 - Psest_2307 0.75 +2.5 2,457,962 - Psest_2307 0.75 +0.1 2,457,965 + Psest_2307 0.75 +0.1 2,457,966 - Psest_2307 0.75 -0.2 2,458,016 + Psest_2307 0.81 -0.3 2,458,017 - Psest_2307 0.81 +0.1 2,458,036 + Psest_2307 0.83 +0.1 2,458,037 - Psest_2307 0.84 +0.2 2,458,082 + Psest_2307 0.89 +0.2 2,458,412 - Psest_2308 0.39 -0.4 2,458,574 - Psest_2308 0.71 -2.4 2,458,688 + -0.4 2,458,689 - -0.1 2,458,689 - +0.7 2,458,689 - +0.2 2,458,751 + -0.5 2,458,751 + +1.0 2,458,751 + +0.3 2,458,752 - -0.1 2,458,752 - -0.6 2,458,752 - +0.8 2,458,752 - +0.2 2,458,752 - +0.1 2,458,809 + +0.1
Or see this region's nucleotide sequence