Experiment: Def Cisplatin 0.0002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1683 and Psest_1684 are separated by 103 nucleotides Psest_1684 and Psest_1685 are separated by 12 nucleotides Psest_1685 and Psest_1686 are separated by 33 nucleotides Psest_1686 and Psest_1687 are separated by 63 nucleotides
Psest_1683: Psest_1683 - MAF protein, at 1,792,842 to 1,793,420
_1683
Psest_1684: Psest_1684 - Predicted metal-binding, possibly nucleic acid-binding protein, at 1,793,524 to 1,794,051
_1684
Psest_1685: Psest_1685 - ribosomal protein L32, at 1,794,064 to 1,794,246
_1685
Psest_1686: Psest_1686 - fatty acid/phospholipid synthesis protein PlsX, at 1,794,280 to 1,795,320
_1686
Psest_1687: Psest_1687 - malonyl CoA-acyl carrier protein transacylase, at 1,795,384 to 1,796,322
_1687
Position (kb)
1794
1795
1796 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1793.373 kb on + strand at 1793.373 kb on + strand at 1793.373 kb on + strand at 1793.373 kb on + strand at 1793.431 kb on + strand at 1793.431 kb on + strand at 1793.431 kb on + strand at 1793.431 kb on + strand at 1793.431 kb on + strand at 1793.431 kb on + strand at 1793.432 kb on - strand at 1793.433 kb on + strand at 1793.433 kb on + strand at 1793.433 kb on + strand at 1793.433 kb on + strand at 1793.433 kb on + strand at 1793.433 kb on + strand at 1793.433 kb on + strand at 1793.433 kb on + strand at 1793.433 kb on + strand at 1793.433 kb on + strand at 1793.433 kb on + strand at 1793.433 kb on + strand at 1793.433 kb on + strand at 1793.433 kb on + strand at 1793.433 kb on + strand at 1793.433 kb on + strand at 1793.433 kb on + strand at 1793.433 kb on + strand at 1793.433 kb on + strand at 1793.433 kb on + strand at 1793.433 kb on + strand at 1793.433 kb on + strand at 1793.433 kb on + strand at 1793.433 kb on + strand at 1793.434 kb on - strand at 1793.434 kb on - strand at 1793.435 kb on + strand at 1793.435 kb on + strand at 1793.435 kb on + strand at 1793.435 kb on + strand at 1793.435 kb on + strand at 1793.435 kb on + strand at 1793.435 kb on + strand at 1793.435 kb on + strand at 1793.435 kb on + strand at 1793.435 kb on + strand at 1793.435 kb on + strand at 1793.435 kb on + strand at 1793.435 kb on + strand at 1793.435 kb on + strand at 1793.435 kb on + strand at 1793.435 kb on + strand at 1793.435 kb on + strand at 1793.435 kb on + strand at 1793.435 kb on + strand at 1793.436 kb on - strand at 1793.436 kb on - strand at 1793.437 kb on + strand at 1793.437 kb on + strand at 1793.437 kb on + strand at 1793.437 kb on + strand at 1793.437 kb on + strand at 1793.437 kb on + strand at 1793.437 kb on + strand at 1793.437 kb on + strand at 1793.437 kb on + strand at 1793.437 kb on + strand at 1793.437 kb on + strand at 1793.437 kb on + strand at 1793.437 kb on + strand at 1793.437 kb on + strand at 1793.437 kb on + strand at 1793.437 kb on + strand at 1793.437 kb on + strand at 1793.437 kb on + strand at 1793.437 kb on + strand at 1793.437 kb on + strand at 1793.437 kb on + strand at 1793.437 kb on + strand at 1793.438 kb on - strand at 1793.438 kb on - strand at 1793.438 kb on - strand at 1793.438 kb on - strand at 1793.438 kb on - strand at 1793.438 kb on - strand at 1793.438 kb on - strand at 1793.438 kb on - strand at 1793.438 kb on - strand at 1793.438 kb on - strand at 1793.438 kb on - strand at 1793.441 kb on + strand at 1793.441 kb on + strand at 1793.452 kb on + strand at 1794.244 kb on + strand at 1794.663 kb on + strand, within Psest_1686 at 1794.719 kb on + strand, within Psest_1686 at 1794.720 kb on - strand, within Psest_1686 at 1794.720 kb on - strand, within Psest_1686 at 1794.851 kb on + strand, within Psest_1686 at 1794.953 kb on + strand, within Psest_1686 at 1794.953 kb on + strand, within Psest_1686 at 1794.953 kb on + strand, within Psest_1686 at 1794.953 kb on + strand, within Psest_1686 at 1794.953 kb on + strand, within Psest_1686 at 1794.954 kb on - strand, within Psest_1686 at 1794.954 kb on - strand, within Psest_1686 at 1794.954 kb on - strand, within Psest_1686 at 1795.099 kb on + strand, within Psest_1686 at 1795.099 kb on + strand, within Psest_1686 at 1795.249 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Def Cisplatin 0.0002 mg/ml remove 1,793,373 + +0.1 1,793,373 + +0.0 1,793,373 + -0.5 1,793,373 + -0.2 1,793,431 + -1.2 1,793,431 + -0.3 1,793,431 + -0.6 1,793,431 + +0.3 1,793,431 + -0.4 1,793,431 + +0.3 1,793,432 - -1.0 1,793,433 + -0.0 1,793,433 + +0.9 1,793,433 + +0.3 1,793,433 + -0.3 1,793,433 + +0.5 1,793,433 + +0.2 1,793,433 + +0.4 1,793,433 + +0.5 1,793,433 + +1.2 1,793,433 + -0.2 1,793,433 + -0.3 1,793,433 + -0.4 1,793,433 + +0.3 1,793,433 + +0.3 1,793,433 + -0.4 1,793,433 + -0.4 1,793,433 + +0.1 1,793,433 + +0.8 1,793,433 + -0.1 1,793,433 + -0.4 1,793,433 + +0.4 1,793,433 + +0.9 1,793,433 + -0.3 1,793,433 + -0.2 1,793,434 - -0.2 1,793,434 - +1.2 1,793,435 + +1.4 1,793,435 + +0.5 1,793,435 + +0.4 1,793,435 + +0.3 1,793,435 + -0.2 1,793,435 + +0.2 1,793,435 + -1.1 1,793,435 + -0.8 1,793,435 + +0.0 1,793,435 + +0.2 1,793,435 + +0.1 1,793,435 + +1.0 1,793,435 + +0.5 1,793,435 + -2.1 1,793,435 + +0.1 1,793,435 + -0.0 1,793,435 + +0.0 1,793,435 + +0.7 1,793,435 + +1.4 1,793,436 - -0.5 1,793,436 - -0.1 1,793,437 + -1.4 1,793,437 + +0.4 1,793,437 + -0.9 1,793,437 + -0.6 1,793,437 + +0.2 1,793,437 + +2.1 1,793,437 + +0.4 1,793,437 + -0.3 1,793,437 + -0.6 1,793,437 + +0.1 1,793,437 + +1.0 1,793,437 + +0.1 1,793,437 + -0.2 1,793,437 + -1.2 1,793,437 + -0.8 1,793,437 + +0.6 1,793,437 + +0.1 1,793,437 + +0.3 1,793,437 + -0.6 1,793,437 + -0.0 1,793,437 + -0.0 1,793,437 + -0.1 1,793,438 - -0.6 1,793,438 - +1.0 1,793,438 - -0.2 1,793,438 - +0.4 1,793,438 - -2.6 1,793,438 - -0.8 1,793,438 - +0.7 1,793,438 - +0.2 1,793,438 - -0.3 1,793,438 - -0.1 1,793,438 - -0.4 1,793,441 + -0.0 1,793,441 + -0.1 1,793,452 + +0.8 1,794,244 + -0.6 1,794,663 + Psest_1686 0.37 -2.6 1,794,719 + Psest_1686 0.42 -1.6 1,794,720 - Psest_1686 0.42 -3.6 1,794,720 - Psest_1686 0.42 -1.9 1,794,851 + Psest_1686 0.55 -1.1 1,794,953 + Psest_1686 0.65 -2.5 1,794,953 + Psest_1686 0.65 -1.1 1,794,953 + Psest_1686 0.65 -3.2 1,794,953 + Psest_1686 0.65 -1.4 1,794,953 + Psest_1686 0.65 -3.4 1,794,954 - Psest_1686 0.65 +0.2 1,794,954 - Psest_1686 0.65 -2.5 1,794,954 - Psest_1686 0.65 -1.9 1,795,099 + Psest_1686 0.79 -0.6 1,795,099 + Psest_1686 0.79 -2.6 1,795,249 + +0.8
Or see this region's nucleotide sequence