Experiment: Def Thallium(I) acetate 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_4331 and Psest_4332 overlap by 26 nucleotides Psest_4332 and Psest_4333 are separated by 52 nucleotides Psest_4333 and Psest_4334 are separated by 17 nucleotides Psest_4334 and Psest_4335 are separated by 21 nucleotides
Psest_4331: Psest_4331 - Uncharacterized conserved protein, at 4,530,682 to 4,531,419
_4331
Psest_4332: Psest_4332 - hypothetical protein, at 4,531,394 to 4,531,972
_4332
Psest_4333: Psest_4333 - Uncharacterized protein required for cytochrome oxidase assembly, at 4,532,025 to 4,533,080
_4333
Psest_4334: Psest_4334 - protoheme IX farnesyltransferase, at 4,533,098 to 4,533,997
_4334
Psest_4335: Psest_4335 - Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems, at 4,534,019 to 4,534,654
_4335
Position (kb)
4532
4533
4534 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4531.044 kb on - strand, within Psest_4331 at 4531.096 kb on + strand, within Psest_4331 at 4531.096 kb on + strand, within Psest_4331 at 4531.096 kb on + strand, within Psest_4331 at 4531.096 kb on + strand, within Psest_4331 at 4531.096 kb on + strand, within Psest_4331 at 4531.096 kb on + strand, within Psest_4331 at 4531.096 kb on + strand, within Psest_4331 at 4531.096 kb on + strand, within Psest_4331 at 4531.096 kb on + strand, within Psest_4331 at 4531.096 kb on + strand, within Psest_4331 at 4531.096 kb on + strand, within Psest_4331 at 4531.096 kb on + strand, within Psest_4331 at 4531.096 kb on + strand, within Psest_4331 at 4531.096 kb on + strand, within Psest_4331 at 4531.096 kb on + strand, within Psest_4331 at 4531.096 kb on + strand, within Psest_4331 at 4531.097 kb on - strand, within Psest_4331 at 4531.097 kb on - strand, within Psest_4331 at 4531.097 kb on - strand, within Psest_4331 at 4531.097 kb on - strand, within Psest_4331 at 4531.097 kb on - strand, within Psest_4331 at 4531.097 kb on - strand, within Psest_4331 at 4531.100 kb on + strand, within Psest_4331 at 4531.100 kb on + strand at 4531.347 kb on + strand at 4531.351 kb on + strand at 4531.351 kb on + strand at 4531.351 kb on + strand at 4531.351 kb on + strand at 4531.351 kb on + strand at 4531.351 kb on + strand at 4531.351 kb on + strand at 4531.351 kb on + strand at 4531.351 kb on + strand at 4531.352 kb on - strand at 4531.352 kb on - strand at 4531.502 kb on + strand, within Psest_4332 at 4531.503 kb on - strand, within Psest_4332 at 4531.503 kb on - strand, within Psest_4332 at 4531.538 kb on + strand, within Psest_4332 at 4531.538 kb on + strand, within Psest_4332 at 4531.539 kb on - strand, within Psest_4332 at 4531.539 kb on - strand, within Psest_4332 at 4531.548 kb on + strand, within Psest_4332 at 4531.549 kb on - strand, within Psest_4332 at 4531.549 kb on - strand, within Psest_4332 at 4531.549 kb on - strand, within Psest_4332 at 4531.549 kb on - strand, within Psest_4332 at 4531.670 kb on + strand, within Psest_4332 at 4531.671 kb on - strand, within Psest_4332 at 4531.760 kb on + strand, within Psest_4332 at 4531.823 kb on + strand, within Psest_4332 at 4531.823 kb on + strand, within Psest_4332 at 4531.824 kb on - strand, within Psest_4332 at 4531.824 kb on - strand, within Psest_4332 at 4531.824 kb on - strand, within Psest_4332 at 4531.861 kb on - strand, within Psest_4332 at 4531.861 kb on - strand, within Psest_4332 at 4531.899 kb on - strand, within Psest_4332 at 4531.943 kb on + strand at 4532.097 kb on + strand at 4532.097 kb on + strand at 4532.098 kb on - strand at 4532.098 kb on - strand at 4532.100 kb on - strand at 4532.148 kb on + strand, within Psest_4333 at 4532.259 kb on + strand, within Psest_4333 at 4532.259 kb on + strand, within Psest_4333 at 4532.259 kb on + strand, within Psest_4333 at 4532.259 kb on + strand, within Psest_4333 at 4532.259 kb on + strand, within Psest_4333 at 4532.259 kb on + strand, within Psest_4333 at 4532.260 kb on - strand, within Psest_4333 at 4532.386 kb on + strand, within Psest_4333 at 4532.504 kb on - strand, within Psest_4333 at 4532.610 kb on + strand, within Psest_4333 at 4532.610 kb on + strand, within Psest_4333 at 4532.610 kb on + strand, within Psest_4333 at 4532.610 kb on + strand, within Psest_4333 at 4532.610 kb on + strand, within Psest_4333 at 4532.610 kb on + strand, within Psest_4333 at 4532.610 kb on + strand, within Psest_4333 at 4532.610 kb on + strand, within Psest_4333 at 4532.610 kb on + strand, within Psest_4333 at 4532.610 kb on + strand, within Psest_4333 at 4532.611 kb on - strand, within Psest_4333 at 4532.611 kb on - strand, within Psest_4333 at 4532.611 kb on - strand, within Psest_4333 at 4532.611 kb on - strand, within Psest_4333 at 4532.611 kb on - strand, within Psest_4333 at 4532.611 kb on - strand, within Psest_4333 at 4532.718 kb on + strand, within Psest_4333 at 4532.718 kb on + strand, within Psest_4333 at 4532.719 kb on - strand, within Psest_4333 at 4532.719 kb on - strand, within Psest_4333 at 4532.719 kb on - strand, within Psest_4333 at 4532.736 kb on + strand, within Psest_4333 at 4532.905 kb on + strand, within Psest_4333 at 4532.905 kb on + strand, within Psest_4333 at 4532.905 kb on + strand, within Psest_4333 at 4532.906 kb on - strand, within Psest_4333 at 4532.906 kb on - strand, within Psest_4333 at 4532.906 kb on - strand, within Psest_4333 at 4533.108 kb on + strand at 4533.108 kb on + strand at 4533.108 kb on + strand at 4533.109 kb on - strand at 4533.109 kb on - strand at 4533.147 kb on - strand at 4533.178 kb on - strand at 4533.178 kb on - strand at 4533.178 kb on - strand at 4533.178 kb on - strand at 4533.201 kb on + strand, within Psest_4334 at 4533.201 kb on + strand, within Psest_4334 at 4533.500 kb on + strand, within Psest_4334 at 4533.500 kb on + strand, within Psest_4334 at 4533.500 kb on + strand, within Psest_4334 at 4533.500 kb on + strand, within Psest_4334 at 4533.500 kb on + strand, within Psest_4334 at 4533.500 kb on + strand, within Psest_4334 at 4533.500 kb on + strand, within Psest_4334 at 4533.501 kb on - strand, within Psest_4334 at 4533.501 kb on - strand, within Psest_4334 at 4533.501 kb on - strand, within Psest_4334 at 4533.501 kb on - strand, within Psest_4334 at 4533.501 kb on - strand, within Psest_4334 at 4533.501 kb on - strand, within Psest_4334 at 4533.501 kb on - strand, within Psest_4334 at 4533.501 kb on - strand, within Psest_4334 at 4533.501 kb on - strand, within Psest_4334 at 4533.501 kb on - strand, within Psest_4334 at 4533.501 kb on - strand, within Psest_4334 at 4533.501 kb on - strand, within Psest_4334 at 4533.501 kb on - strand, within Psest_4334 at 4533.501 kb on - strand, within Psest_4334 at 4533.501 kb on - strand, within Psest_4334 at 4533.501 kb on - strand, within Psest_4334 at 4533.692 kb on + strand, within Psest_4334 at 4533.693 kb on - strand, within Psest_4334 at 4533.708 kb on + strand, within Psest_4334 at 4533.708 kb on + strand, within Psest_4334 at 4533.709 kb on - strand, within Psest_4334 at 4533.709 kb on - strand, within Psest_4334 at 4533.740 kb on + strand, within Psest_4334 at 4533.740 kb on + strand, within Psest_4334 at 4533.740 kb on + strand, within Psest_4334 at 4533.741 kb on - strand, within Psest_4334 at 4533.765 kb on - strand, within Psest_4334 at 4533.765 kb on - strand at 4533.827 kb on + strand, within Psest_4334 at 4533.828 kb on - strand, within Psest_4334 at 4533.828 kb on - strand, within Psest_4334 at 4533.828 kb on - strand, within Psest_4334 at 4533.867 kb on - strand, within Psest_4334 at 4533.939 kb on - strand at 4533.939 kb on - strand at 4533.977 kb on + strand at 4533.978 kb on - strand at 4533.978 kb on - strand at 4534.008 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Def Thallium(I) acetate 0.125 mg/ml remove 4,531,044 - Psest_4331 0.49 +0.5 4,531,096 + Psest_4331 0.56 +0.4 4,531,096 + Psest_4331 0.56 -2.6 4,531,096 + Psest_4331 0.56 +0.4 4,531,096 + Psest_4331 0.56 -1.8 4,531,096 + Psest_4331 0.56 +0.2 4,531,096 + Psest_4331 0.56 +0.8 4,531,096 + Psest_4331 0.56 -0.8 4,531,096 + Psest_4331 0.56 +1.2 4,531,096 + Psest_4331 0.56 -0.1 4,531,096 + Psest_4331 0.56 +0.2 4,531,096 + Psest_4331 0.56 -2.1 4,531,096 + Psest_4331 0.56 -2.1 4,531,096 + Psest_4331 0.56 -0.4 4,531,096 + Psest_4331 0.56 +0.2 4,531,096 + Psest_4331 0.56 +1.2 4,531,096 + Psest_4331 0.56 +1.2 4,531,097 - Psest_4331 0.56 +0.3 4,531,097 - Psest_4331 0.56 +0.5 4,531,097 - Psest_4331 0.56 -0.5 4,531,097 - Psest_4331 0.56 +0.8 4,531,097 - Psest_4331 0.56 -1.1 4,531,097 - Psest_4331 0.56 +1.5 4,531,100 + Psest_4331 0.57 +1.4 4,531,100 + -0.4 4,531,347 + -1.6 4,531,351 + +0.2 4,531,351 + -1.4 4,531,351 + +0.1 4,531,351 + +0.4 4,531,351 + -0.1 4,531,351 + -0.5 4,531,351 + -0.7 4,531,351 + +1.2 4,531,351 + -0.7 4,531,352 - +0.1 4,531,352 - -1.4 4,531,502 + Psest_4332 0.19 +0.4 4,531,503 - Psest_4332 0.19 +0.2 4,531,503 - Psest_4332 0.19 -1.5 4,531,538 + Psest_4332 0.25 +0.1 4,531,538 + Psest_4332 0.25 -0.0 4,531,539 - Psest_4332 0.25 -2.1 4,531,539 - Psest_4332 0.25 +1.2 4,531,548 + Psest_4332 0.27 -0.2 4,531,549 - Psest_4332 0.27 -0.3 4,531,549 - Psest_4332 0.27 -0.1 4,531,549 - Psest_4332 0.27 -1.2 4,531,549 - Psest_4332 0.27 -0.2 4,531,670 + Psest_4332 0.48 +1.4 4,531,671 - Psest_4332 0.48 +0.2 4,531,760 + Psest_4332 0.63 +1.0 4,531,823 + Psest_4332 0.74 +0.4 4,531,823 + Psest_4332 0.74 -0.8 4,531,824 - Psest_4332 0.74 -0.7 4,531,824 - Psest_4332 0.74 +0.3 4,531,824 - Psest_4332 0.74 +0.1 4,531,861 - Psest_4332 0.81 -0.8 4,531,861 - Psest_4332 0.81 +0.4 4,531,899 - Psest_4332 0.87 -0.8 4,531,943 + -0.8 4,532,097 + -0.1 4,532,097 + +0.9 4,532,098 - -1.3 4,532,098 - -1.1 4,532,100 - -0.3 4,532,148 + Psest_4333 0.12 -2.1 4,532,259 + Psest_4333 0.22 -0.3 4,532,259 + Psest_4333 0.22 -0.8 4,532,259 + Psest_4333 0.22 -0.4 4,532,259 + Psest_4333 0.22 +0.2 4,532,259 + Psest_4333 0.22 -0.7 4,532,259 + Psest_4333 0.22 -2.0 4,532,260 - Psest_4333 0.22 -1.8 4,532,386 + Psest_4333 0.34 +1.2 4,532,504 - Psest_4333 0.45 -0.3 4,532,610 + Psest_4333 0.55 -0.8 4,532,610 + Psest_4333 0.55 +1.4 4,532,610 + Psest_4333 0.55 +0.1 4,532,610 + Psest_4333 0.55 +1.2 4,532,610 + Psest_4333 0.55 -0.8 4,532,610 + Psest_4333 0.55 -0.7 4,532,610 + Psest_4333 0.55 -1.4 4,532,610 + Psest_4333 0.55 -0.6 4,532,610 + Psest_4333 0.55 -0.3 4,532,610 + Psest_4333 0.55 -0.9 4,532,611 - Psest_4333 0.55 +1.2 4,532,611 - Psest_4333 0.55 -2.0 4,532,611 - Psest_4333 0.55 -0.5 4,532,611 - Psest_4333 0.55 +0.6 4,532,611 - Psest_4333 0.55 -0.6 4,532,611 - Psest_4333 0.55 +0.5 4,532,718 + Psest_4333 0.66 -1.4 4,532,718 + Psest_4333 0.66 -2.7 4,532,719 - Psest_4333 0.66 -0.9 4,532,719 - Psest_4333 0.66 +0.2 4,532,719 - Psest_4333 0.66 +0.0 4,532,736 + Psest_4333 0.67 +0.2 4,532,905 + Psest_4333 0.83 -1.6 4,532,905 + Psest_4333 0.83 +0.6 4,532,905 + Psest_4333 0.83 +0.7 4,532,906 - Psest_4333 0.83 -1.3 4,532,906 - Psest_4333 0.83 +0.0 4,532,906 - Psest_4333 0.83 -0.8 4,533,108 + +2.6 4,533,108 + +0.5 4,533,108 + +0.2 4,533,109 - -1.3 4,533,109 - -0.7 4,533,147 - -0.4 4,533,178 - +1.2 4,533,178 - -0.4 4,533,178 - +0.4 4,533,178 - +0.2 4,533,201 + Psest_4334 0.11 -1.1 4,533,201 + Psest_4334 0.11 -0.5 4,533,500 + Psest_4334 0.45 +0.3 4,533,500 + Psest_4334 0.45 -0.1 4,533,500 + Psest_4334 0.45 -0.2 4,533,500 + Psest_4334 0.45 -0.5 4,533,500 + Psest_4334 0.45 +0.1 4,533,500 + Psest_4334 0.45 -0.1 4,533,500 + Psest_4334 0.45 +0.6 4,533,501 - Psest_4334 0.45 +1.2 4,533,501 - Psest_4334 0.45 -0.2 4,533,501 - Psest_4334 0.45 +0.6 4,533,501 - Psest_4334 0.45 +0.5 4,533,501 - Psest_4334 0.45 +0.0 4,533,501 - Psest_4334 0.45 +0.6 4,533,501 - Psest_4334 0.45 -1.4 4,533,501 - Psest_4334 0.45 +0.8 4,533,501 - Psest_4334 0.45 +0.2 4,533,501 - Psest_4334 0.45 +0.9 4,533,501 - Psest_4334 0.45 +0.2 4,533,501 - Psest_4334 0.45 +1.4 4,533,501 - Psest_4334 0.45 +0.4 4,533,501 - Psest_4334 0.45 -0.4 4,533,501 - Psest_4334 0.45 +0.6 4,533,501 - Psest_4334 0.45 +1.6 4,533,692 + Psest_4334 0.66 -3.5 4,533,693 - Psest_4334 0.66 +0.7 4,533,708 + Psest_4334 0.68 -0.6 4,533,708 + Psest_4334 0.68 +0.3 4,533,709 - Psest_4334 0.68 +0.3 4,533,709 - Psest_4334 0.68 +0.6 4,533,740 + Psest_4334 0.71 -0.1 4,533,740 + Psest_4334 0.71 -2.5 4,533,740 + Psest_4334 0.71 -0.2 4,533,741 - Psest_4334 0.71 -1.8 4,533,765 - Psest_4334 0.74 +0.7 4,533,765 - +0.2 4,533,827 + Psest_4334 0.81 -3.0 4,533,828 - Psest_4334 0.81 -0.4 4,533,828 - Psest_4334 0.81 -0.9 4,533,828 - Psest_4334 0.81 +0.6 4,533,867 - Psest_4334 0.85 -0.1 4,533,939 - -0.7 4,533,939 - -0.1 4,533,977 + +0.2 4,533,978 - +1.1 4,533,978 - +0.9 4,534,008 + -1.6
Or see this region's nucleotide sequence