Experiment: Def Thallium(I) acetate 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2865 and Psest_2866 are separated by 12 nucleotides Psest_2866 and Psest_2867 are separated by 128 nucleotides Psest_2867 and Psest_2868 are separated by 57 nucleotides
Psest_2865: Psest_2865 - Predicted permease, DMT superfamily, at 3,054,973 to 3,055,884
_2865
Psest_2866: Psest_2866 - Uncharacterized conserved protein, at 3,055,897 to 3,056,607
_2866
Psest_2867: Psest_2867 - hypothetical protein, at 3,056,736 to 3,057,134
_2867
Psest_2868: Psest_2868 - Phosphoketolase, at 3,057,192 to 3,059,606
_2868
Position (kb)
3055
3056
3057 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3054.913 kb on - strand at 3054.913 kb on - strand at 3054.913 kb on - strand at 3054.913 kb on - strand at 3054.913 kb on - strand at 3054.913 kb on - strand at 3054.913 kb on - strand at 3054.913 kb on - strand at 3054.913 kb on - strand at 3054.934 kb on + strand at 3054.934 kb on + strand at 3054.937 kb on - strand at 3055.138 kb on + strand, within Psest_2865 at 3055.138 kb on + strand, within Psest_2865 at 3055.138 kb on + strand, within Psest_2865 at 3055.139 kb on - strand, within Psest_2865 at 3055.297 kb on + strand, within Psest_2865 at 3055.310 kb on + strand, within Psest_2865 at 3055.512 kb on + strand, within Psest_2865 at 3055.512 kb on + strand, within Psest_2865 at 3055.627 kb on + strand, within Psest_2865 at 3055.627 kb on + strand, within Psest_2865 at 3055.627 kb on + strand, within Psest_2865 at 3055.627 kb on + strand, within Psest_2865 at 3055.627 kb on + strand, within Psest_2865 at 3055.628 kb on - strand, within Psest_2865 at 3055.658 kb on - strand, within Psest_2865 at 3055.659 kb on + strand, within Psest_2865 at 3055.659 kb on + strand, within Psest_2865 at 3055.659 kb on + strand, within Psest_2865 at 3055.660 kb on - strand, within Psest_2865 at 3055.660 kb on - strand, within Psest_2865 at 3055.660 kb on - strand, within Psest_2865 at 3055.786 kb on + strand, within Psest_2865 at 3055.786 kb on + strand, within Psest_2865 at 3055.800 kb on - strand at 3055.854 kb on - strand at 3055.857 kb on + strand at 3055.858 kb on - strand at 3055.858 kb on - strand at 3055.858 kb on - strand at 3055.858 kb on - strand at 3055.955 kb on + strand at 3055.956 kb on - strand at 3055.956 kb on - strand at 3055.956 kb on - strand at 3055.956 kb on - strand at 3056.007 kb on + strand, within Psest_2866 at 3056.132 kb on - strand, within Psest_2866 at 3056.132 kb on - strand, within Psest_2866 at 3056.153 kb on + strand, within Psest_2866 at 3056.270 kb on + strand, within Psest_2866 at 3056.271 kb on - strand, within Psest_2866 at 3056.647 kb on - strand at 3056.647 kb on - strand at 3056.724 kb on - strand at 3056.724 kb on - strand at 3056.739 kb on + strand at 3056.740 kb on - strand at 3056.740 kb on - strand at 3056.898 kb on + strand, within Psest_2867 at 3057.132 kb on + strand at 3057.133 kb on - strand at 3057.133 kb on - strand at 3057.133 kb on - strand at 3057.341 kb on + strand at 3057.359 kb on + strand at 3057.360 kb on - strand at 3057.360 kb on - strand at 3057.449 kb on + strand, within Psest_2868 at 3057.574 kb on + strand, within Psest_2868 at 3057.575 kb on - strand, within Psest_2868 at 3057.575 kb on - strand, within Psest_2868
Per-strain Table
Position Strand Gene LocusTag Fraction Def Thallium(I) acetate 0.125 mg/ml remove 3,054,913 - -0.9 3,054,913 - +0.7 3,054,913 - +0.9 3,054,913 - +1.3 3,054,913 - +0.3 3,054,913 - +0.4 3,054,913 - +0.7 3,054,913 - -1.4 3,054,913 - +0.6 3,054,934 + -0.3 3,054,934 + -0.7 3,054,937 - -0.0 3,055,138 + Psest_2865 0.18 +0.6 3,055,138 + Psest_2865 0.18 +0.0 3,055,138 + Psest_2865 0.18 +0.3 3,055,139 - Psest_2865 0.18 +0.9 3,055,297 + Psest_2865 0.36 +1.3 3,055,310 + Psest_2865 0.37 +0.6 3,055,512 + Psest_2865 0.59 +0.8 3,055,512 + Psest_2865 0.59 +2.3 3,055,627 + Psest_2865 0.72 +1.1 3,055,627 + Psest_2865 0.72 +1.1 3,055,627 + Psest_2865 0.72 +1.5 3,055,627 + Psest_2865 0.72 +1.0 3,055,627 + Psest_2865 0.72 +0.9 3,055,628 - Psest_2865 0.72 -1.9 3,055,658 - Psest_2865 0.75 -2.8 3,055,659 + Psest_2865 0.75 +1.0 3,055,659 + Psest_2865 0.75 +0.2 3,055,659 + Psest_2865 0.75 -1.1 3,055,660 - Psest_2865 0.75 -0.6 3,055,660 - Psest_2865 0.75 +0.2 3,055,660 - Psest_2865 0.75 +0.3 3,055,786 + Psest_2865 0.89 +0.0 3,055,786 + Psest_2865 0.89 +0.1 3,055,800 - -1.5 3,055,854 - +0.7 3,055,857 + -0.2 3,055,858 - +1.1 3,055,858 - +1.0 3,055,858 - +0.6 3,055,858 - -0.1 3,055,955 + +0.7 3,055,956 - +1.6 3,055,956 - -1.6 3,055,956 - +0.9 3,055,956 - +1.1 3,056,007 + Psest_2866 0.15 -1.2 3,056,132 - Psest_2866 0.33 -0.5 3,056,132 - Psest_2866 0.33 +1.2 3,056,153 + Psest_2866 0.36 +0.4 3,056,270 + Psest_2866 0.52 +0.6 3,056,271 - Psest_2866 0.53 -0.3 3,056,647 - +0.4 3,056,647 - -1.3 3,056,724 - +0.4 3,056,724 - +0.1 3,056,739 + +0.2 3,056,740 - +0.3 3,056,740 - -3.7 3,056,898 + Psest_2867 0.41 -1.3 3,057,132 + -0.2 3,057,133 - +0.1 3,057,133 - -0.4 3,057,133 - +1.1 3,057,341 + +0.1 3,057,359 + -0.4 3,057,360 - +0.0 3,057,360 - +0.6 3,057,449 + Psest_2868 0.11 -0.4 3,057,574 + Psest_2868 0.16 -0.2 3,057,575 - Psest_2868 0.16 +1.1 3,057,575 - Psest_2868 0.16 +0.2
Or see this region's nucleotide sequence