Experiment: Def Thallium(I) acetate 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2325 and Psest_2326 are separated by 58 nucleotides Psest_2326 and Psest_2327 are separated by 37 nucleotides Psest_2327 and Psest_2328 are separated by 190 nucleotides
Psest_2325: Psest_2325 - alpha-L-glutamate ligase-related protein, at 2,479,206 to 2,480,189
_2325
Psest_2326: Psest_2326 - aminodeoxychorismate synthase, component I, bacterial clade, at 2,480,248 to 2,481,594
_2326
Psest_2327: Psest_2327 - phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein, at 2,481,632 to 2,482,249
_2327
Psest_2328: Psest_2328 - phosophoadenylyl-sulfate reductase (thioredoxin)/thioredoxin-dependent adenylylsulfate APS reductase, at 2,482,440 to 2,483,174
_2328
Position (kb)
2480
2481
2482 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2479.281 kb on + strand at 2479.281 kb on + strand at 2479.281 kb on + strand at 2479.281 kb on + strand at 2479.282 kb on - strand at 2479.282 kb on - strand at 2479.282 kb on - strand at 2479.282 kb on - strand at 2479.282 kb on - strand at 2479.293 kb on + strand at 2479.294 kb on - strand at 2479.383 kb on + strand, within Psest_2325 at 2479.383 kb on + strand, within Psest_2325 at 2479.384 kb on - strand, within Psest_2325 at 2479.384 kb on - strand, within Psest_2325 at 2479.384 kb on - strand, within Psest_2325 at 2479.521 kb on + strand, within Psest_2325 at 2479.522 kb on - strand, within Psest_2325 at 2479.597 kb on - strand, within Psest_2325 at 2479.597 kb on - strand, within Psest_2325 at 2479.674 kb on + strand, within Psest_2325 at 2479.674 kb on + strand, within Psest_2325 at 2479.675 kb on - strand, within Psest_2325 at 2479.675 kb on - strand, within Psest_2325 at 2479.675 kb on - strand, within Psest_2325 at 2479.675 kb on - strand, within Psest_2325 at 2479.675 kb on - strand, within Psest_2325 at 2479.769 kb on + strand, within Psest_2325 at 2479.938 kb on + strand, within Psest_2325 at 2479.938 kb on + strand, within Psest_2325 at 2479.939 kb on - strand, within Psest_2325 at 2479.959 kb on + strand, within Psest_2325 at 2479.959 kb on + strand, within Psest_2325 at 2479.959 kb on + strand, within Psest_2325 at 2479.960 kb on - strand, within Psest_2325 at 2480.437 kb on - strand, within Psest_2326 at 2480.437 kb on - strand, within Psest_2326 at 2480.437 kb on - strand, within Psest_2326 at 2480.437 kb on - strand, within Psest_2326 at 2480.542 kb on + strand, within Psest_2326 at 2480.542 kb on + strand, within Psest_2326 at 2480.542 kb on + strand, within Psest_2326 at 2480.543 kb on - strand, within Psest_2326 at 2480.543 kb on - strand, within Psest_2326 at 2480.543 kb on - strand, within Psest_2326 at 2480.624 kb on - strand, within Psest_2326 at 2480.714 kb on + strand, within Psest_2326 at 2480.715 kb on - strand, within Psest_2326 at 2480.801 kb on - strand, within Psest_2326 at 2480.830 kb on + strand, within Psest_2326 at 2480.830 kb on + strand, within Psest_2326 at 2480.830 kb on + strand, within Psest_2326 at 2480.830 kb on + strand, within Psest_2326 at 2480.830 kb on + strand, within Psest_2326 at 2480.830 kb on + strand, within Psest_2326 at 2480.830 kb on + strand, within Psest_2326 at 2480.830 kb on + strand, within Psest_2326 at 2480.830 kb on + strand, within Psest_2326 at 2480.830 kb on + strand, within Psest_2326 at 2480.830 kb on + strand, within Psest_2326 at 2480.830 kb on + strand, within Psest_2326 at 2480.830 kb on + strand, within Psest_2326 at 2480.830 kb on + strand, within Psest_2326 at 2480.831 kb on - strand, within Psest_2326 at 2480.831 kb on - strand, within Psest_2326 at 2480.831 kb on - strand, within Psest_2326 at 2480.831 kb on - strand, within Psest_2326 at 2480.911 kb on + strand, within Psest_2326 at 2480.911 kb on + strand, within Psest_2326 at 2480.938 kb on - strand, within Psest_2326 at 2480.944 kb on + strand, within Psest_2326 at 2480.945 kb on - strand, within Psest_2326 at 2481.075 kb on + strand, within Psest_2326 at 2481.076 kb on - strand, within Psest_2326 at 2481.224 kb on - strand, within Psest_2326 at 2481.391 kb on + strand, within Psest_2326 at 2481.391 kb on + strand, within Psest_2326 at 2481.391 kb on + strand, within Psest_2326 at 2481.391 kb on + strand, within Psest_2326 at 2481.391 kb on + strand, within Psest_2326 at 2481.391 kb on + strand, within Psest_2326 at 2481.392 kb on - strand, within Psest_2326 at 2481.392 kb on - strand, within Psest_2326 at 2481.392 kb on - strand, within Psest_2326 at 2481.392 kb on - strand, within Psest_2326 at 2481.392 kb on - strand, within Psest_2326 at 2481.392 kb on - strand, within Psest_2326 at 2481.409 kb on + strand, within Psest_2326 at 2481.409 kb on + strand, within Psest_2326 at 2481.409 kb on + strand, within Psest_2326 at 2481.409 kb on + strand, within Psest_2326 at 2481.409 kb on + strand, within Psest_2326 at 2481.409 kb on + strand, within Psest_2326 at 2481.409 kb on + strand, within Psest_2326 at 2481.410 kb on - strand, within Psest_2326 at 2481.410 kb on - strand, within Psest_2326 at 2481.410 kb on - strand, within Psest_2326 at 2481.789 kb on + strand, within Psest_2327 at 2481.789 kb on + strand, within Psest_2327 at 2481.790 kb on - strand, within Psest_2327 at 2481.790 kb on - strand, within Psest_2327 at 2481.790 kb on - strand, within Psest_2327 at 2481.790 kb on - strand, within Psest_2327 at 2481.819 kb on + strand, within Psest_2327 at 2481.819 kb on + strand, within Psest_2327 at 2481.819 kb on + strand, within Psest_2327 at 2481.819 kb on + strand, within Psest_2327 at 2481.819 kb on + strand, within Psest_2327 at 2481.820 kb on - strand, within Psest_2327 at 2481.820 kb on - strand, within Psest_2327 at 2481.876 kb on + strand, within Psest_2327 at 2481.969 kb on + strand, within Psest_2327 at 2481.970 kb on - strand, within Psest_2327 at 2482.127 kb on + strand, within Psest_2327 at 2482.127 kb on + strand, within Psest_2327 at 2482.127 kb on + strand, within Psest_2327 at 2482.128 kb on - strand, within Psest_2327 at 2482.241 kb on + strand at 2482.242 kb on - strand at 2482.323 kb on - strand at 2482.324 kb on + strand at 2482.351 kb on - strand at 2482.369 kb on + strand at 2482.369 kb on + strand at 2482.370 kb on - strand at 2482.370 kb on - strand at 2482.370 kb on - strand at 2482.370 kb on - strand at 2482.370 kb on - strand at 2482.373 kb on + strand at 2482.383 kb on + strand at 2482.425 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Def Thallium(I) acetate 0.125 mg/ml remove 2,479,281 + -0.8 2,479,281 + +0.4 2,479,281 + -0.9 2,479,281 + -1.9 2,479,282 - -0.9 2,479,282 - -1.1 2,479,282 - -0.9 2,479,282 - -0.7 2,479,282 - -0.2 2,479,293 + -1.0 2,479,294 - -1.3 2,479,383 + Psest_2325 0.18 -1.3 2,479,383 + Psest_2325 0.18 -0.9 2,479,384 - Psest_2325 0.18 -0.6 2,479,384 - Psest_2325 0.18 -1.3 2,479,384 - Psest_2325 0.18 -0.5 2,479,521 + Psest_2325 0.32 -0.4 2,479,522 - Psest_2325 0.32 -1.0 2,479,597 - Psest_2325 0.40 -1.1 2,479,597 - Psest_2325 0.40 -0.5 2,479,674 + Psest_2325 0.48 -0.3 2,479,674 + Psest_2325 0.48 -0.2 2,479,675 - Psest_2325 0.48 -1.3 2,479,675 - Psest_2325 0.48 -0.0 2,479,675 - Psest_2325 0.48 -0.1 2,479,675 - Psest_2325 0.48 -1.1 2,479,675 - Psest_2325 0.48 -1.5 2,479,769 + Psest_2325 0.57 -0.9 2,479,938 + Psest_2325 0.74 -1.5 2,479,938 + Psest_2325 0.74 -0.0 2,479,939 - Psest_2325 0.74 -1.2 2,479,959 + Psest_2325 0.77 -1.7 2,479,959 + Psest_2325 0.77 -1.7 2,479,959 + Psest_2325 0.77 -1.0 2,479,960 - Psest_2325 0.77 -0.4 2,480,437 - Psest_2326 0.14 -0.3 2,480,437 - Psest_2326 0.14 -0.9 2,480,437 - Psest_2326 0.14 -1.7 2,480,437 - Psest_2326 0.14 -0.6 2,480,542 + Psest_2326 0.22 -0.2 2,480,542 + Psest_2326 0.22 -0.5 2,480,542 + Psest_2326 0.22 +0.3 2,480,543 - Psest_2326 0.22 +0.3 2,480,543 - Psest_2326 0.22 -0.8 2,480,543 - Psest_2326 0.22 -0.3 2,480,624 - Psest_2326 0.28 -0.3 2,480,714 + Psest_2326 0.35 +0.1 2,480,715 - Psest_2326 0.35 -0.8 2,480,801 - Psest_2326 0.41 -0.0 2,480,830 + Psest_2326 0.43 -0.9 2,480,830 + Psest_2326 0.43 -0.6 2,480,830 + Psest_2326 0.43 +0.1 2,480,830 + Psest_2326 0.43 +0.1 2,480,830 + Psest_2326 0.43 -0.6 2,480,830 + Psest_2326 0.43 -0.5 2,480,830 + Psest_2326 0.43 +0.3 2,480,830 + Psest_2326 0.43 -0.5 2,480,830 + Psest_2326 0.43 +0.1 2,480,830 + Psest_2326 0.43 +0.5 2,480,830 + Psest_2326 0.43 -0.5 2,480,830 + Psest_2326 0.43 -0.7 2,480,830 + Psest_2326 0.43 +0.5 2,480,830 + Psest_2326 0.43 -1.9 2,480,831 - Psest_2326 0.43 -1.1 2,480,831 - Psest_2326 0.43 -0.5 2,480,831 - Psest_2326 0.43 -0.6 2,480,831 - Psest_2326 0.43 -0.9 2,480,911 + Psest_2326 0.49 +0.4 2,480,911 + Psest_2326 0.49 -0.7 2,480,938 - Psest_2326 0.51 -0.7 2,480,944 + Psest_2326 0.52 +0.8 2,480,945 - Psest_2326 0.52 -0.5 2,481,075 + Psest_2326 0.61 -0.5 2,481,076 - Psest_2326 0.61 -0.1 2,481,224 - Psest_2326 0.72 -0.4 2,481,391 + Psest_2326 0.85 -0.6 2,481,391 + Psest_2326 0.85 -0.0 2,481,391 + Psest_2326 0.85 +0.2 2,481,391 + Psest_2326 0.85 -0.2 2,481,391 + Psest_2326 0.85 -0.6 2,481,391 + Psest_2326 0.85 -0.6 2,481,392 - Psest_2326 0.85 -0.3 2,481,392 - Psest_2326 0.85 +0.5 2,481,392 - Psest_2326 0.85 -0.4 2,481,392 - Psest_2326 0.85 +0.0 2,481,392 - Psest_2326 0.85 +0.1 2,481,392 - Psest_2326 0.85 -4.3 2,481,409 + Psest_2326 0.86 -0.9 2,481,409 + Psest_2326 0.86 -0.4 2,481,409 + Psest_2326 0.86 -0.9 2,481,409 + Psest_2326 0.86 -0.3 2,481,409 + Psest_2326 0.86 -0.6 2,481,409 + Psest_2326 0.86 -0.7 2,481,409 + Psest_2326 0.86 -1.3 2,481,410 - Psest_2326 0.86 -1.0 2,481,410 - Psest_2326 0.86 +0.1 2,481,410 - Psest_2326 0.86 +0.3 2,481,789 + Psest_2327 0.25 +0.4 2,481,789 + Psest_2327 0.25 -1.9 2,481,790 - Psest_2327 0.26 -1.1 2,481,790 - Psest_2327 0.26 -0.5 2,481,790 - Psest_2327 0.26 -1.5 2,481,790 - Psest_2327 0.26 -0.4 2,481,819 + Psest_2327 0.30 -3.0 2,481,819 + Psest_2327 0.30 -0.4 2,481,819 + Psest_2327 0.30 +0.1 2,481,819 + Psest_2327 0.30 +0.6 2,481,819 + Psest_2327 0.30 +0.3 2,481,820 - Psest_2327 0.30 -1.2 2,481,820 - Psest_2327 0.30 -0.4 2,481,876 + Psest_2327 0.39 +0.6 2,481,969 + Psest_2327 0.55 -0.9 2,481,970 - Psest_2327 0.55 -1.3 2,482,127 + Psest_2327 0.80 -1.5 2,482,127 + Psest_2327 0.80 +2.4 2,482,127 + Psest_2327 0.80 -1.4 2,482,128 - Psest_2327 0.80 -0.3 2,482,241 + -0.7 2,482,242 - -0.6 2,482,323 - -1.1 2,482,324 + -0.6 2,482,351 - +0.7 2,482,369 + -1.1 2,482,369 + +0.2 2,482,370 - +0.3 2,482,370 - -1.4 2,482,370 - -2.4 2,482,370 - -1.4 2,482,370 - -0.3 2,482,373 + -0.4 2,482,383 + -0.7 2,482,425 + +0.7
Or see this region's nucleotide sequence