Experiment: Def Thallium(I) acetate 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2134 and Psest_2135 are separated by 87 nucleotides Psest_2135 and Psest_2136 are separated by 271 nucleotides
Psest_2134: Psest_2134 - amino acid carrier protein, at 2,270,200 to 2,271,543
_2134
Psest_2135: Psest_2135 - Peroxiredoxin, at 2,271,631 to 2,272,131
_2135
Psest_2136: Psest_2136 - Predicted homoserine dehydrogenase, at 2,272,403 to 2,273,635
_2136
Position (kb)
2271
2272
2273 Strain fitness (log2 ratio)
-1
0
1
2
3 at 2270.895 kb on - strand, within Psest_2134 at 2271.095 kb on + strand, within Psest_2134 at 2271.095 kb on + strand, within Psest_2134 at 2271.297 kb on + strand, within Psest_2134 at 2271.317 kb on - strand, within Psest_2134 at 2271.317 kb on - strand, within Psest_2134 at 2271.317 kb on - strand, within Psest_2134 at 2271.526 kb on + strand at 2271.527 kb on - strand at 2271.537 kb on + strand at 2271.537 kb on + strand at 2271.537 kb on + strand at 2271.538 kb on - strand at 2271.538 kb on - strand at 2271.538 kb on - strand at 2271.873 kb on + strand, within Psest_2135 at 2271.874 kb on - strand, within Psest_2135 at 2271.980 kb on - strand, within Psest_2135 at 2271.980 kb on - strand, within Psest_2135 at 2271.980 kb on - strand, within Psest_2135 at 2272.169 kb on + strand at 2272.265 kb on + strand at 2272.268 kb on + strand at 2272.268 kb on + strand at 2272.268 kb on + strand at 2272.268 kb on + strand at 2272.269 kb on - strand at 2272.269 kb on - strand at 2272.333 kb on - strand at 2272.373 kb on - strand at 2272.402 kb on + strand at 2272.402 kb on + strand at 2272.402 kb on + strand at 2272.403 kb on - strand at 2272.403 kb on - strand at 2272.403 kb on - strand at 2272.408 kb on + strand at 2272.408 kb on + strand at 2272.408 kb on + strand at 2272.721 kb on + strand, within Psest_2136 at 2272.722 kb on - strand, within Psest_2136 at 2272.834 kb on + strand, within Psest_2136 at 2272.835 kb on - strand, within Psest_2136 at 2273.090 kb on + strand, within Psest_2136 at 2273.090 kb on + strand, within Psest_2136
Per-strain Table
Position Strand Gene LocusTag Fraction Def Thallium(I) acetate 0.125 mg/ml remove 2,270,895 - Psest_2134 0.52 +0.1 2,271,095 + Psest_2134 0.67 +1.6 2,271,095 + Psest_2134 0.67 +1.3 2,271,297 + Psest_2134 0.82 +0.5 2,271,317 - Psest_2134 0.83 +0.8 2,271,317 - Psest_2134 0.83 +0.6 2,271,317 - Psest_2134 0.83 +0.4 2,271,526 + +0.6 2,271,527 - +0.3 2,271,537 + -0.1 2,271,537 + +0.2 2,271,537 + -0.6 2,271,538 - +0.1 2,271,538 - +1.0 2,271,538 - +1.2 2,271,873 + Psest_2135 0.48 +0.8 2,271,874 - Psest_2135 0.49 +0.4 2,271,980 - Psest_2135 0.70 +0.6 2,271,980 - Psest_2135 0.70 +0.8 2,271,980 - Psest_2135 0.70 +0.9 2,272,169 + +0.7 2,272,265 + +0.2 2,272,268 + +0.5 2,272,268 + -0.2 2,272,268 + +0.6 2,272,268 + -0.0 2,272,269 - +1.2 2,272,269 - +1.2 2,272,333 - +1.5 2,272,373 - +1.4 2,272,402 + +1.7 2,272,402 + +2.9 2,272,402 + +1.3 2,272,403 - +2.6 2,272,403 - +1.5 2,272,403 - +1.9 2,272,408 + +1.8 2,272,408 + +1.3 2,272,408 + +2.1 2,272,721 + Psest_2136 0.26 +2.2 2,272,722 - Psest_2136 0.26 -0.2 2,272,834 + Psest_2136 0.35 +1.4 2,272,835 - Psest_2136 0.35 +1.6 2,273,090 + Psest_2136 0.56 +2.8 2,273,090 + Psest_2136 0.56 +2.1
Or see this region's nucleotide sequence