Strain Fitness in Shewanella oneidensis MR-1 around SOA0043

Experiment: Glycine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glycine (N)
31,114	+		SOA0041	0.12	+0.8
31,114	+		SOA0041	0.12	+0.0
31,115	-		SOA0041	0.12	+1.0
31,116	-		SOA0041	0.12	+0.7
31,116	-		SOA0041	0.12	+0.3
31,116	-		SOA0041	0.12	+0.9
31,116	-		SOA0041	0.12	+1.3
31,116	-		SOA0041	0.12	+0.8
31,116	-		SOA0041	0.12	+1.1
31,116	-		SOA0041	0.12	-0.7
31,116	-		SOA0041	0.12	+1.3
31,116	-		SOA0041	0.12	+0.6
31,117	-		SOA0041	0.13	+1.2
31,117	-		SOA0041	0.13	+0.1
31,117	-		SOA0041	0.13	+0.5
31,117	-		SOA0041	0.13	+1.2
31,117	-		SOA0041	0.13	+0.3
31,117	-		SOA0041	0.13	+1.1
31,117	-		SOA0041	0.13	+0.6
31,122	-		SOA0041	0.14	+0.7
31,122	-		SOA0041	0.14	+1.3
31,122	-		SOA0041	0.14	-0.7
31,122	-		SOA0041	0.14	+0.4
31,122	-		SOA0041	0.14	+1.1
31,143	+		SOA0041	0.21	-0.1
31,143	+		SOA0041	0.21	+0.1
31,143	+		SOA0041	0.21	+0.7
31,143	+		SOA0041	0.21	+0.6
31,151	-		SOA0041	0.23	+0.5
31,151	-		SOA0041	0.23	+0.6
31,151	-		SOA0041	0.23	+0.8
31,153	+		SOA0041	0.24	-0.3
31,160	+		SOA0041	0.26	-0.0
31,163	-		SOA0041	0.27	-0.2
31,173	+		SOA0041	0.30	+1.1
31,174	+		SOA0041	0.31	+0.3
31,174	+		SOA0041	0.31	+0.3
31,174	+		SOA0041	0.31	-0.1
31,174	+		SOA0041	0.31	+0.1
31,174	+		SOA0041	0.31	-0.6
31,174	+		SOA0041	0.31	+0.4
31,174	+		SOA0041	0.31	+0.7
31,174	+		SOA0041	0.31	+0.0
31,174	+		SOA0041	0.31	-0.5
31,174	+		SOA0041	0.31	+1.0
31,182	-		SOA0041	0.33	+0.2
31,182	-		SOA0041	0.33	+0.4
31,182	-		SOA0041	0.33	+0.0
31,182	-		SOA0041	0.33	+0.8
31,182	-		SOA0041	0.33	+0.1
31,182	-		SOA0041	0.33	+2.1
31,182	-		SOA0041	0.33	-0.3
31,182	-		SOA0041	0.33	+0.7
31,182	-		SOA0041	0.33	+0.6
31,187	+		SOA0041	0.35	-0.8
31,187	+		SOA0041	0.35	+0.2
31,187	+		SOA0041	0.35	-1.0
31,187	+		SOA0041	0.35	+1.6
31,187	+		SOA0041	0.35	+0.4
31,187	+		SOA0041	0.35	-0.3
31,187	+		SOA0041	0.35	-0.1
31,187	+		SOA0041	0.35	-0.0
31,187	+		SOA0041	0.35	+0.2
31,187	+		SOA0041	0.35	+0.8
31,187	+		SOA0041	0.35	-0.2
31,187	+		SOA0041	0.35	+0.1
31,187	+		SOA0041	0.35	+0.8
31,195	+				+1.2
31,195	-		SOA0041	0.37	+0.3
31,195	-		SOA0041	0.37	+1.0
31,195	-		SOA0041	0.37	+0.3
31,195	-		SOA0041	0.37	+0.5
31,195	-		SOA0041	0.37	+0.8
31,195	-		SOA0041	0.37	+0.3
31,195	-		SOA0041	0.37	+1.5
31,195	-		SOA0041	0.37	+0.6
31,195	-		SOA0041	0.37	+0.6
31,195	-		SOA0041	0.37	+0.7
31,202	-		SOA0041	0.39	+0.8
31,209	+		SOA0041	0.42	-0.2
31,209	+		SOA0041	0.42	+0.8
31,209	+		SOA0041	0.42	+1.1
31,209	+		SOA0041	0.42	+0.2
31,209	+		SOA0041	0.42	+0.8
31,216	+		SOA0041	0.44	+0.1
31,216	+		SOA0041	0.44	+0.2
31,217	-		SOA0041	0.44	+0.8
31,217	-		SOA0041	0.44	+0.5
31,217	-		SOA0041	0.44	+0.5
31,217	-		SOA0041	0.44	+0.2
31,217	-		SOA0041	0.44	+0.3
31,217	-		SOA0041	0.44	+0.4
31,222	+		SOA0041	0.46	+0.0
31,222	+		SOA0041	0.46	+0.0
31,222	+		SOA0041	0.46	+1.7
31,222	+		SOA0041	0.46	-0.5
31,222	+		SOA0041	0.46	+0.6
31,222	+		SOA0041	0.46	+0.3
31,222	+		SOA0041	0.46	+0.4
31,222	+		SOA0041	0.46	+0.4
31,222	+		SOA0041	0.46	-0.6
31,222	+		SOA0041	0.46	-0.1
31,222	+		SOA0041	0.46	+0.5
31,222	+		SOA0041	0.46	+0.3
31,222	+		SOA0041	0.46	+0.6
31,222	+		SOA0041	0.46	+0.4
31,222	+		SOA0041	0.46	+0.9
31,222	+		SOA0041	0.46	+0.4
31,222	+		SOA0041	0.46	+0.1
31,222	+		SOA0041	0.46	+1.4
31,222	+		SOA0041	0.46	-0.3
31,222	+		SOA0041	0.46	+0.3
31,222	+		SOA0041	0.46	+0.3
31,222	+		SOA0041	0.46	+0.2
31,222	+		SOA0041	0.46	+0.6
31,222	+		SOA0041	0.46	+0.5
31,222	+		SOA0041	0.46	-0.3
31,222	+		SOA0041	0.46	+0.7
31,222	+		SOA0041	0.46	+0.8
31,222	+		SOA0041	0.46	+0.1
31,222	+		SOA0041	0.46	-0.1
31,222	+		SOA0041	0.46	+2.1
31,222	+		SOA0041	0.46	+0.6
31,222	+		SOA0041	0.46	+0.0
31,222	+		SOA0041	0.46	+0.5
31,222	+		SOA0041	0.46	+0.9
31,222	+		SOA0041	0.46	+0.2
31,222	+		SOA0041	0.46	+0.0
31,222	+		SOA0041	0.46	+0.5
31,222	+		SOA0041	0.46	+0.4
31,222	+		SOA0041	0.46	+0.6
31,222	+		SOA0041	0.46	-0.5
31,222	+		SOA0041	0.46	-0.0
31,222	+		SOA0041	0.46	-1.2
31,222	+		SOA0041	0.46	-0.7
31,222	+		SOA0041	0.46	+0.6
31,223	+		SOA0041	0.46	+0.7
31,223	+		SOA0041	0.46	+0.2
31,223	+		SOA0041	0.46	-0.2
31,223	+		SOA0041	0.46	+0.6
31,223	+		SOA0041	0.46	-0.1
31,223	+		SOA0041	0.46	+0.7
31,223	+		SOA0041	0.46	-0.4
31,223	+		SOA0041	0.46	-0.1
31,223	+		SOA0041	0.46	-0.0
31,223	+		SOA0041	0.46	+0.5
31,223	+		SOA0041	0.46	+0.4
31,223	+		SOA0041	0.46	+1.5
31,223	+		SOA0041	0.46	+1.1
31,223	+		SOA0041	0.46	+0.6
31,223	+		SOA0041	0.46	+0.9
31,223	+		SOA0041	0.46	-0.0
31,223	+		SOA0041	0.46	-0.9
31,223	+		SOA0041	0.46	-0.8
31,223	+		SOA0041	0.46	-0.6
31,223	+		SOA0041	0.46	-0.4
31,223	+		SOA0041	0.46	+0.7
31,223	+		SOA0041	0.46	-0.2
31,223	+		SOA0041	0.46	+0.7
31,223	+		SOA0041	0.46	+0.5
31,223	+		SOA0041	0.46	-0.6
31,223	+		SOA0041	0.46	-0.4
31,223	+		SOA0041	0.46	+0.5
31,223	+		SOA0041	0.46	+0.5
31,223	+		SOA0041	0.46	+0.2
31,223	+		SOA0041	0.46	+0.5
31,223	+		SOA0041	0.46	+0.3
31,223	+		SOA0041	0.46	-0.2
31,223	+		SOA0041	0.46	+0.6
31,223	+		SOA0041	0.46	+0.4
31,223	+		SOA0041	0.46	+1.0
31,223	+		SOA0041	0.46	+1.3
31,223	+		SOA0041	0.46	+0.7
31,223	+		SOA0041	0.46	+0.6
31,223	+		SOA0041	0.46	+0.6
31,223	+		SOA0041	0.46	-0.1
31,223	+		SOA0041	0.46	+0.8
31,223	+		SOA0041	0.46	+0.2
31,223	+		SOA0041	0.46	+0.0
31,223	+		SOA0041	0.46	-0.2
31,223	+		SOA0041	0.46	+0.2
31,223	+		SOA0041	0.46	-0.4
31,223	+		SOA0041	0.46	+0.9
31,223	+		SOA0041	0.46	+0.0
31,223	+		SOA0041	0.46	+0.5
31,223	+		SOA0041	0.46	+0.0
31,223	+		SOA0041	0.46	+0.6
31,223	+		SOA0041	0.46	+0.4
31,223	+		SOA0041	0.46	+0.6
31,223	+		SOA0041	0.46	+0.3
31,223	+		SOA0041	0.46	+0.4
31,223	+		SOA0041	0.46	+0.5
31,223	+		SOA0041	0.46	-0.1
31,223	+		SOA0041	0.46	+0.3
31,223	+		SOA0041	0.46	+0.6
31,223	+		SOA0041	0.46	-0.2
31,223	+		SOA0041	0.46	+2.1
31,223	+		SOA0041	0.46	+0.3
31,223	+		SOA0041	0.46	+0.5
31,223	+		SOA0041	0.46	-0.4
31,223	+		SOA0041	0.46	+0.7
31,223	+		SOA0041	0.46	+0.3
31,223	+		SOA0041	0.46	+0.0
31,223	+		SOA0041	0.46	+0.5
31,223	+		SOA0041	0.46	+0.1
31,223	+		SOA0041	0.46	-0.1
31,223	+		SOA0041	0.46	+0.4
31,223	+		SOA0041	0.46	+0.7
31,223	+		SOA0041	0.46	-0.0
31,223	+		SOA0041	0.46	+0.6
31,223	+		SOA0041	0.46	+0.4
31,223	+		SOA0041	0.46	+0.6
31,223	+		SOA0041	0.46	+0.7
31,223	+		SOA0041	0.46	+0.8
31,223	+		SOA0041	0.46	+1.1
31,223	+		SOA0041	0.46	+0.7
31,223	+		SOA0041	0.46	+1.2
31,223	+		SOA0041	0.46	+0.2
31,223	+		SOA0041	0.46	+1.9
31,223	+		SOA0041	0.46	-0.9
31,223	+		SOA0041	0.46	+0.6
31,223	+		SOA0041	0.46	+1.2
31,223	+		SOA0041	0.46	+0.4
31,223	+		SOA0041	0.46	+1.7
31,223	+		SOA0041	0.46	-0.0
31,223	+		SOA0041	0.46	+0.5
31,223	+		SOA0041	0.46	-0.5
31,223	+		SOA0041	0.46	-0.1
31,223	+		SOA0041	0.46	+0.3
31,223	+		SOA0041	0.46	+0.6
31,223	+		SOA0041	0.46	+0.4
31,223	+		SOA0041	0.46	+2.0
31,223	+		SOA0041	0.46	+1.7
31,223	+		SOA0041	0.46	+0.2
31,223	+		SOA0041	0.46	-0.4
31,223	+		SOA0041	0.46	+1.1
31,223	+		SOA0041	0.46	+0.5
31,223	+		SOA0041	0.46	+1.0
31,223	+		SOA0041	0.46	+0.4
31,223	+		SOA0041	0.46	+0.5
31,223	+		SOA0041	0.46	+0.0
31,223	+		SOA0041	0.46	-0.3
31,223	+		SOA0041	0.46	+0.3
31,223	+		SOA0041	0.46	-0.3
31,223	+		SOA0041	0.46	+0.9
31,223	+		SOA0041	0.46	+1.5
31,223	+		SOA0041	0.46	+0.0
31,223	+		SOA0041	0.46	-0.1
31,223	+		SOA0041	0.46	-0.4
31,223	+		SOA0041	0.46	+2.0
31,223	+		SOA0041	0.46	-0.8
31,223	+		SOA0041	0.46	-0.0
31,223	+		SOA0041	0.46	+0.1
31,223	+		SOA0041	0.46	-0.3
31,223	+		SOA0041	0.46	+0.7
31,223	+		SOA0041	0.46	+0.5
31,223	+		SOA0041	0.46	-0.2
31,223	+		SOA0041	0.46	+0.3
31,223	+		SOA0041	0.46	+0.6
31,223	+		SOA0041	0.46	+0.1
31,223	+		SOA0041	0.46	+0.1
31,223	+		SOA0041	0.46	+0.8
31,223	+		SOA0041	0.46	-0.8
31,223	+		SOA0041	0.46	-0.4
31,223	+		SOA0041	0.46	+0.7
31,223	+		SOA0041	0.46	+0.6
31,223	+		SOA0041	0.46	-1.2
31,223	+		SOA0041	0.46	+0.9
31,223	+		SOA0041	0.46	+0.7
31,223	+		SOA0041	0.46	+0.7
31,223	+		SOA0041	0.46	-0.1
31,223	+		SOA0041	0.46	+0.2
31,223	+		SOA0041	0.46	+0.6
31,223	+		SOA0041	0.46	+0.5
31,223	+		SOA0041	0.46	-0.2
31,223	+		SOA0041	0.46	+1.3
31,223	+		SOA0041	0.46	+0.1
31,223	+		SOA0041	0.46	+0.5
31,223	+		SOA0041	0.46	+0.4
31,223	+		SOA0041	0.46	-0.4
31,223	+		SOA0041	0.46	+0.0
31,223	+		SOA0041	0.46	-0.0
31,223	+		SOA0041	0.46	+0.1
31,223	+		SOA0041	0.46	-1.3
31,223	+		SOA0041	0.46	+0.3
31,223	+		SOA0041	0.46	+0.4
31,223	+		SOA0041	0.46	-0.2
31,223	+		SOA0041	0.46	+0.1
31,223	+		SOA0041	0.46	+0.2
31,223	+		SOA0041	0.46	+0.5
31,223	+		SOA0041	0.46	-0.1
31,223	+		SOA0041	0.46	+0.5
31,223	+		SOA0041	0.46	+0.1
31,223	+		SOA0041	0.46	+0.7
31,223	+		SOA0041	0.46	+0.1
31,223	+		SOA0041	0.46	+0.6
31,223	+		SOA0041	0.46	+0.1
31,223	+		SOA0041	0.46	+0.3
31,223	+		SOA0041	0.46	+0.4
31,223	+		SOA0041	0.46	+0.6
31,223	+		SOA0041	0.46	-0.4
31,223	+		SOA0041	0.46	+0.0
31,223	+		SOA0041	0.46	+0.1
31,223	+		SOA0041	0.46	+0.5
31,224	+		SOA0041	0.46	+0.5
31,224	+		SOA0041	0.46	-0.2
31,224	+		SOA0041	0.46	+0.8
31,224	+		SOA0041	0.46	-0.1
31,224	+		SOA0041	0.46	+0.3
31,224	+		SOA0041	0.46	+0.4
31,224	+		SOA0041	0.46	+1.7
31,224	+		SOA0041	0.46	+0.5
31,224	+		SOA0041	0.46	+0.6
31,224	+		SOA0041	0.46	+0.7
31,224	-		SOA0041	0.46	+1.2
31,224	-		SOA0041	0.46	+1.1
31,224	-		SOA0041	0.46	+0.5
31,229	+		SOA0041	0.48	-1.8
31,230	-		SOA0041	0.48	+1.7
31,230	-		SOA0041	0.48	+1.0
31,230	-		SOA0041	0.48	+1.7
31,230	-		SOA0041	0.48	+0.4
31,230	-		SOA0041	0.48	+1.0
31,230	-		SOA0041	0.48	+0.9
31,230	-		SOA0041	0.48	+0.7
31,230	-		SOA0041	0.48	+0.2
31,230	-		SOA0041	0.48	+0.4
31,230	-		SOA0041	0.48	+1.9
31,230	-		SOA0041	0.48	+0.5
31,230	-		SOA0041	0.48	+0.6
31,230	-		SOA0041	0.48	-0.3
31,230	-		SOA0041	0.48	+1.2
31,230	-		SOA0041	0.48	+1.4
31,230	-		SOA0041	0.48	+0.5
31,230	-		SOA0041	0.48	+0.8
31,230	-		SOA0041	0.48	+1.1
31,230	-		SOA0041	0.48	+0.7
31,230	-		SOA0041	0.48	+1.1
31,230	-		SOA0041	0.48	+0.9
31,230	-		SOA0041	0.48	+0.5
31,230	-		SOA0041	0.48	+0.6
31,230	-		SOA0041	0.48	+0.1
31,230	-		SOA0041	0.48	+0.9
31,230	-		SOA0041	0.48	+0.6
31,230	-		SOA0041	0.48	+0.8
31,230	-		SOA0041	0.48	+2.0
31,231	-		SOA0041	0.48	+0.7
31,231	-		SOA0041	0.48	-0.0
31,231	-		SOA0041	0.48	+1.0
31,231	-		SOA0041	0.48	+1.7
31,231	-		SOA0041	0.48	+0.9
31,231	-		SOA0041	0.48	+0.8
31,231	-		SOA0041	0.48	+0.7
31,231	-		SOA0041	0.48	+0.4
31,231	-		SOA0041	0.48	+0.5
31,231	-		SOA0041	0.48	+1.0
31,231	-		SOA0041	0.48	+0.7
31,231	-		SOA0041	0.48	+0.7
31,231	-		SOA0041	0.48	+1.2
31,231	-		SOA0041	0.48	+0.5
31,231	-		SOA0041	0.48	+1.4
31,231	-		SOA0041	0.48	+0.9
31,231	-		SOA0041	0.48	-0.2
31,231	-		SOA0041	0.48	+0.7
31,231	-		SOA0041	0.48	+0.2
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33,162	+		SOA0044	0.59	-0.9
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33,219	-		SOA0044	0.64	-0.4