Strain Fitness in Shewanella oneidensis MR-1 around SO3300

Experiment: L-Glutamine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Glutamine (N)
3,444,517	+		SO3299	0.46	+0.9
3,444,517	+		SO3299	0.46	+0.1
3,444,532	+		SO3299	0.47	+1.0
3,444,532	+		SO3299	0.47	+1.6
3,444,532	+		SO3299	0.47	-0.3
3,444,532	+		SO3299	0.47	+0.2
3,444,532	+		SO3299	0.47	+0.6
3,444,532	+		SO3299	0.47	+1.0
3,444,532	+		SO3299	0.47	-0.9
3,444,533	-		SO3299	0.47	+0.1
3,444,540	-		SO3299	0.47	+0.1
3,444,540	-		SO3299	0.47	-0.0
3,444,548	-		SO3299	0.48	+0.2
3,444,575	+		SO3299	0.49	-0.1
3,444,579	-		SO3299	0.50	+0.6
3,444,596	+		SO3299	0.51	+0.1
3,444,604	+		SO3299	0.51	-0.4
3,444,604	+		SO3299	0.51	-0.2
3,444,611	+		SO3299	0.52	-0.7
3,444,611	-		SO3299	0.52	+0.2
3,444,611	-		SO3299	0.52	+0.8
3,444,612	-		SO3299	0.52	+0.1
3,444,634	-		SO3299	0.53	-0.5
3,444,635	+		SO3299	0.53	+0.3
3,444,636	-		SO3299	0.53	+0.2
3,444,638	-		SO3299	0.53	+0.4
3,444,643	+		SO3299	0.54	+0.2
3,444,651	-		SO3299	0.54	-0.2
3,444,651	-		SO3299	0.54	-0.7
3,444,709	+		SO3299	0.58	+0.3
3,444,727	-		SO3299	0.59	-0.4
3,444,795	-		SO3299	0.63	-0.1
3,444,798	+		SO3299	0.63	-0.7
3,444,798	+		SO3299	0.63	-0.9
3,444,803	+		SO3299	0.63	+0.2
3,444,806	-		SO3299	0.63	-0.2
3,444,810	+		SO3299	0.64	+1.1
3,444,810	+		SO3299	0.64	-0.2
3,444,810	+		SO3299	0.64	+0.8
3,444,813	-		SO3299	0.64	+0.7
3,444,816	-		SO3299	0.64	+0.1
3,444,816	-		SO3299	0.64	-0.4
3,444,818	-		SO3299	0.64	-1.9
3,444,818	-		SO3299	0.64	-1.3
3,444,828	+		SO3299	0.65	+0.4
3,444,833	+		SO3299	0.65	-0.4
3,444,836	+		SO3299	0.65	-1.3
3,444,836	+		SO3299	0.65	-0.6
3,444,836	+		SO3299	0.65	+0.2
3,444,836	-		SO3299	0.65	+0.5
3,444,837	+		SO3299	0.65	-1.1
3,444,841	-		SO3299	0.66	+0.4
3,444,842	+		SO3299	0.66	+0.4
3,444,844	-		SO3299	0.66	+0.4
3,444,844	-		SO3299	0.66	+0.5
3,444,852	+		SO3299	0.66	-0.6
3,444,854	+		SO3299	0.66	-0.3
3,444,854	+		SO3299	0.66	+0.4
3,444,854	+		SO3299	0.66	+1.0
3,444,862	-		SO3299	0.67	-0.7
3,444,862	-		SO3299	0.67	+0.1
3,444,862	-		SO3299	0.67	-0.6
3,444,862	-		SO3299	0.67	-0.5
3,444,866	+		SO3299	0.67	-0.3
3,444,874	-		SO3299	0.68	-0.8
3,444,874	-		SO3299	0.68	+0.0
3,444,892	+		SO3299	0.69	+0.2
3,444,892	-		SO3299	0.69	+0.1
3,444,892	-		SO3299	0.69	+0.8
3,444,901	+		SO3299	0.69	+1.6
3,444,901	+		SO3299	0.69	+0.2
3,444,901	+		SO3299	0.69	-1.0
3,444,901	+		SO3299	0.69	-0.2
3,444,901	+		SO3299	0.69	-0.3
3,444,901	+		SO3299	0.69	+0.3
3,444,909	-		SO3299	0.70	-0.2
3,444,909	-		SO3299	0.70	+0.0
3,444,909	-		SO3299	0.70	+0.9
3,444,952	-		SO3299	0.72	+1.2
3,444,959	+		SO3299	0.73	+0.3
3,444,970	+		SO3299	0.73	+0.3
3,444,970	+		SO3299	0.73	+0.2
3,444,975	+		SO3299	0.74	+0.1
3,444,975	+		SO3299	0.74	+1.8
3,444,978	-		SO3299	0.74	-0.2
3,444,978	-		SO3299	0.74	-0.2
3,444,978	-		SO3299	0.74	-0.5
3,444,978	-		SO3299	0.74	+0.3
3,445,006	+		SO3299	0.76	+0.2
3,445,009	-		SO3299	0.76	-1.2
3,445,022	-		SO3299	0.77	+0.0
3,445,055	-		SO3299	0.79	-1.1
3,445,071	+		SO3299	0.80	+0.2
3,445,079	-		SO3299	0.80	-0.6
3,445,079	-		SO3299	0.80	+0.3
3,445,084	-		SO3299	0.80	-0.3
3,445,093	+		SO3299	0.81	-0.5
3,445,157	-		SO3299	0.85	-0.1
3,445,159	-		SO3299	0.85	-0.8
3,445,159	-		SO3299	0.85	-0.6
3,445,160	+		SO3299	0.85	+0.0
3,445,188	-		SO3299	0.87	+0.6
3,445,194	+		SO3299	0.87	-0.5
3,445,206	+		SO3299	0.88	-0.8
3,445,207	+		SO3299	0.88	-0.0
3,445,213	-		SO3299	0.88	+0.3
3,445,213	-		SO3299	0.88	+0.2
3,445,215	+		SO3299	0.88	+0.1
3,445,228	+		SO3299	0.89	-0.6
3,445,249	+				-0.9
3,445,250	+				-0.5
3,445,250	+				+0.4
3,445,250	+				-0.2
3,445,271	+				+0.2
3,445,279	-				+0.8
3,445,279	-				-0.7
3,445,287	+				-0.1
3,445,287	+				-0.2
3,445,288	+				+0.6
3,445,295	-				+0.0
3,445,295	-				+0.4
3,445,295	-				+1.1
3,445,296	-				+0.2
3,445,309	+				-0.1
3,445,317	-				-0.0
3,445,328	+				+0.4
3,445,328	+				+0.1
3,445,330	+				+2.1
3,445,336	+				+0.2
3,445,336	+				-0.8
3,445,336	+				-1.1
3,445,336	-				+0.1
3,445,338	-				-2.1
3,445,344	-				-0.7
3,445,344	-				+0.4
3,445,344	-				-0.1
3,445,345	-				+0.4
3,445,364	+				-0.0
3,445,364	+				+0.2
3,445,372	-				+0.5
3,445,372	-				+0.8
3,445,372	-				+0.0
3,445,372	-				+0.8
3,445,372	-				+0.0
3,445,374	-				+0.4
3,445,524	+				-0.7
3,445,524	+				-0.6
3,445,524	+				+0.0
3,445,524	+				+0.4
3,445,532	-				+0.1
3,445,561	+		SO3300	0.14	-0.1
3,445,561	+		SO3300	0.14	+0.2
3,445,561	+		SO3300	0.14	-1.0
3,445,561	+		SO3300	0.14	+0.5
3,445,561	+		SO3300	0.14	+0.2
3,445,561	+		SO3300	0.14	+0.3
3,445,561	+		SO3300	0.14	+0.1
3,445,563	+		SO3300	0.15	-0.6
3,445,564	-		SO3300	0.15	+0.5
3,445,569	-		SO3300	0.17	+0.2
3,445,569	-		SO3300	0.17	+0.6
3,445,569	-		SO3300	0.17	+0.8
3,445,569	-		SO3300	0.17	+0.8
3,445,569	-		SO3300	0.17	+1.2
3,445,569	-		SO3300	0.17	+0.3
3,445,571	-		SO3300	0.17	+0.1
3,445,582	+		SO3300	0.20	-0.1
3,445,582	+		SO3300	0.20	+0.3
3,445,582	+		SO3300	0.20	+1.3
3,445,582	+		SO3300	0.20	-0.1
3,445,582	+		SO3300	0.20	-0.2
3,445,583	-		SO3300	0.20	+0.4
3,445,585	+		SO3300	0.21	-0.1
3,445,589	+		SO3300	0.22	+0.3
3,445,590	+		SO3300	0.22	-0.8
3,445,590	+		SO3300	0.22	+1.2
3,445,590	+		SO3300	0.22	-0.1
3,445,590	+		SO3300	0.22	-0.2
3,445,590	+		SO3300	0.22	+0.2
3,445,590	+		SO3300	0.22	-0.5
3,445,590	+		SO3300	0.22	-0.1
3,445,590	-		SO3300	0.22	+0.0
3,445,590	-		SO3300	0.22	+0.2
3,445,590	-		SO3300	0.22	+1.2
3,445,590	-		SO3300	0.22	+0.4
3,445,590	-		SO3300	0.22	-0.2
3,445,590	-		SO3300	0.22	+0.3
3,445,593	-		SO3300	0.23	+0.1
3,445,597	-		SO3300	0.24	+0.8
3,445,598	-		SO3300	0.24	+0.5
3,445,598	-		SO3300	0.24	-0.3
3,445,598	-		SO3300	0.24	+0.3
3,445,598	-		SO3300	0.24	+0.0
3,445,598	-		SO3300	0.24	+0.1
3,445,598	-		SO3300	0.24	+0.4
3,445,598	-		SO3300	0.24	+0.8
3,445,598	-		SO3300	0.24	+0.6
3,445,602	-		SO3300	0.25	+1.4
3,445,610	+		SO3300	0.27	+0.3
3,445,610	+		SO3300	0.27	-0.6
3,445,610	+		SO3300	0.27	+0.7
3,445,610	+		SO3300	0.27	-0.4
3,445,610	+		SO3300	0.27	+1.7
3,445,617	+		SO3300	0.29	+0.2
3,445,617	+		SO3300	0.29	-0.5
3,445,617	+		SO3300	0.29	-0.6
3,445,618	-		SO3300	0.29	+1.1
3,445,618	-		SO3300	0.29	+0.7
3,445,623	-		SO3300	0.31	+0.9
3,445,625	-		SO3300	0.31	-0.0
3,445,625	-		SO3300	0.31	-0.3
3,445,625	-		SO3300	0.31	+0.2
3,445,677	-		SO3300	0.45	+0.6
3,445,697	+		SO3300	0.50	-0.7
3,445,709	-		SO3300	0.53	+0.4
3,445,713	+		SO3300	0.54	-0.0
3,445,715	+		SO3300	0.55	-0.3
3,445,718	+		SO3300	0.56	-0.1
3,445,718	+		SO3300	0.56	+0.5
3,445,718	+		SO3300	0.56	+0.5
3,445,718	+		SO3300	0.56	+0.1
3,445,718	+		SO3300	0.56	+0.1
3,445,718	+		SO3300	0.56	-0.5
3,445,718	+		SO3300	0.56	+2.1
3,445,718	+		SO3300	0.56	+0.4
3,445,718	+		SO3300	0.56	-0.9
3,445,718	+		SO3300	0.56	-0.9
3,445,718	+		SO3300	0.56	-1.7
3,445,718	+		SO3300	0.56	+0.8
3,445,718	+		SO3300	0.56	-0.1
3,445,718	+		SO3300	0.56	+0.7
3,445,718	+		SO3300	0.56	-0.9
3,445,718	+		SO3300	0.56	+0.4
3,445,718	+		SO3300	0.56	-0.1
3,445,718	+		SO3300	0.56	+1.9
3,445,718	+		SO3300	0.56	+0.6
3,445,718	+		SO3300	0.56	+0.2
3,445,718	+		SO3300	0.56	+0.6
3,445,718	+		SO3300	0.56	+0.7
3,445,718	+		SO3300	0.56	-1.3
3,445,718	+		SO3300	0.56	-0.3
3,445,718	+		SO3300	0.56	-0.1
3,445,718	+		SO3300	0.56	+0.8
3,445,718	+		SO3300	0.56	+0.1
3,445,718	+		SO3300	0.56	-0.6
3,445,718	+		SO3300	0.56	+0.6
3,445,718	+		SO3300	0.56	-0.1
3,445,718	+		SO3300	0.56	-0.0
3,445,718	+		SO3300	0.56	+2.1
3,445,718	+		SO3300	0.56	+0.3
3,445,720	+		SO3300	0.56	-0.3
3,445,720	+		SO3300	0.56	+0.5
3,445,726	-		SO3300	0.58	+0.4
3,445,726	-		SO3300	0.58	+0.8
3,445,726	-		SO3300	0.58	-0.1
3,445,726	-		SO3300	0.58	+0.1
3,445,726	-		SO3300	0.58	+0.4
3,445,726	-		SO3300	0.58	+0.0
3,445,726	-		SO3300	0.58	+0.5
3,445,726	-		SO3300	0.58	-0.2
3,445,726	-		SO3300	0.58	+1.0
3,445,726	-		SO3300	0.58	+1.0
3,445,726	-		SO3300	0.58	-0.1
3,445,726	-		SO3300	0.58	+0.9
3,445,726	-		SO3300	0.58	+1.1
3,445,726	-		SO3300	0.58	+2.4
3,445,726	-		SO3300	0.58	+0.6
3,445,726	-		SO3300	0.58	+0.5
3,445,726	-		SO3300	0.58	+0.5
3,445,726	-		SO3300	0.58	+0.3
3,445,727	+		SO3300	0.58	+0.5
3,445,728	-		SO3300	0.58	+0.3
3,445,728	-		SO3300	0.58	+0.3
3,445,728	-		SO3300	0.58	+0.6
3,445,751	-		SO3300	0.64	+0.1
3,445,763	+		SO3300	0.67	-1.1
3,445,771	-		SO3300	0.70	+0.3
3,445,785	-		SO3300	0.73	+0.8
3,445,794	+		SO3300	0.76	-0.1
3,445,794	+		SO3300	0.76	-0.1
3,445,795	-		SO3300	0.76	-0.2
3,445,816	-		SO3300	0.81	+0.8
3,445,821	-		SO3300	0.83	+0.2
3,445,821	-		SO3300	0.83	+0.3
3,445,917	+				+1.9
3,445,918	+				+0.6
3,445,935	+				-0.1
3,445,942	-				+0.3
3,445,943	-				+0.4
3,445,946	+				+0.7
3,445,948	+				+0.1
3,445,956	-				+0.2
3,445,966	+				+0.2
3,445,968	-				+1.1
3,445,978	-				+0.3
3,445,982	+				-1.0
3,445,990	+				+0.1
3,445,990	+				+0.5
3,445,990	+				+0.2
3,445,990	-				+0.7
3,445,997	+				+0.1
3,445,998	-				+0.6
3,446,024	-				-0.5
3,446,035	+				-0.1
3,446,035	+				-0.1
3,446,035	+				+0.2
3,446,035	-				+0.7
3,446,043	-		SO3301	0.10	+0.8
3,446,043	-		SO3301	0.10	+0.4
3,446,043	-		SO3301	0.10	+1.3
3,446,043	-		SO3301	0.10	+0.0
3,446,043	-		SO3301	0.10	+1.0
3,446,043	-		SO3301	0.10	+0.1
3,446,043	-		SO3301	0.10	+2.0
3,446,043	-		SO3301	0.10	+0.9
3,446,043	-		SO3301	0.10	+0.5
3,446,051	+		SO3301	0.11	+0.1
3,446,051	+		SO3301	0.11	+0.2
3,446,051	+		SO3301	0.11	-0.3
3,446,051	+		SO3301	0.11	+0.7
3,446,051	+		SO3301	0.11	+0.4
3,446,051	+		SO3301	0.11	-0.5
3,446,051	+		SO3301	0.11	-0.8
3,446,051	-		SO3301	0.11	+0.4
3,446,051	-		SO3301	0.11	+0.2
3,446,059	-		SO3301	0.11	+1.2
3,446,059	-		SO3301	0.11	-0.1
3,446,059	-		SO3301	0.11	+0.7
3,446,059	-		SO3301	0.11	+1.1
3,446,059	-		SO3301	0.11	-0.0
3,446,059	-		SO3301	0.11	+0.6
3,446,061	+		SO3301	0.11	-0.0
3,446,063	+		SO3301	0.12	+1.3
3,446,063	+		SO3301	0.12	-0.2
3,446,064	-		SO3301	0.12	+1.2
3,446,071	-		SO3301	0.12	+0.4
3,446,077	-		SO3301	0.12	+0.5
3,446,111	+		SO3301	0.15	-0.1
3,446,176	+		SO3301	0.19	-0.2
3,446,181	+		SO3301	0.19	+0.2
3,446,181	+		SO3301	0.19	+0.5
3,446,184	-		SO3301	0.20	+0.3
3,446,194	-		SO3301	0.20	+2.5
3,446,239	-		SO3301	0.23	+0.8
3,446,245	+		SO3301	0.24	+0.5
3,446,246	-		SO3301	0.24	+0.7
3,446,250	+		SO3301	0.24	-0.2
3,446,258	-		SO3301	0.25	-0.1
3,446,267	+		SO3301	0.25	+0.0
3,446,274	+		SO3301	0.26	+0.3
3,446,293	+		SO3301	0.27	+0.6
3,446,301	-		SO3301	0.27	+0.0
3,446,303	+		SO3301	0.28	-0.0
3,446,310	-		SO3301	0.28	-0.3
3,446,311	-		SO3301	0.28	+0.4
3,446,311	-		SO3301	0.28	-1.0
3,446,311	-		SO3301	0.28	+0.5
3,446,326	+		SO3301	0.29	+1.4
3,446,334	-		SO3301	0.30	+0.3
3,446,375	+		SO3301	0.32	-0.6
3,446,382	+		SO3301	0.33	-0.1
3,446,382	+		SO3301	0.33	-0.3
3,446,382	+		SO3301	0.33	+0.5
3,446,382	+		SO3301	0.33	+0.2
3,446,382	+		SO3301	0.33	+0.5
3,446,382	+		SO3301	0.33	-0.4
3,446,382	+		SO3301	0.33	+0.4
3,446,389	+		SO3301	0.33	-0.4
3,446,390	-		SO3301	0.33	+0.8
3,446,390	-		SO3301	0.33	-0.1
3,446,390	-		SO3301	0.33	+0.2
3,446,390	-		SO3301	0.33	+0.2
3,446,390	-		SO3301	0.33	-0.8
3,446,390	-		SO3301	0.33	+0.0
3,446,390	-		SO3301	0.33	+1.4
3,446,390	-		SO3301	0.33	+0.7
3,446,390	-		SO3301	0.33	+0.3
3,446,397	+		SO3301	0.34	-1.1
3,446,405	-		SO3301	0.34	+0.5
3,446,413	-		SO3301	0.35	-0.1
3,446,452	+		SO3301	0.37	-0.3
3,446,460	-		SO3301	0.38	+0.1
3,446,460	-		SO3301	0.38	+0.2
3,446,474	+		SO3301	0.39	+0.0
3,446,484	+		SO3301	0.40	-0.2
3,446,484	+		SO3301	0.40	+0.5
3,446,485	-		SO3301	0.40	+0.4
3,446,492	-		SO3301	0.40	+0.5
3,446,492	-		SO3301	0.40	-0.5
3,446,492	-		SO3301	0.40	-0.5
3,446,492	-		SO3301	0.40	+0.2
3,446,531	+		SO3301	0.43	+0.3
3,446,531	+		SO3301	0.43	+0.1
3,446,536	+		SO3301	0.43	+0.3
3,446,536	+		SO3301	0.43	-0.1
3,446,536	+		SO3301	0.43	-0.2
3,446,536	+		SO3301	0.43	-0.4
3,446,539	-		SO3301	0.43	+0.1
3,446,539	-		SO3301	0.43	+0.1
3,446,539	-		SO3301	0.43	+0.2
3,446,539	-		SO3301	0.43	+0.4
3,446,543	+		SO3301	0.44	-0.0
3,446,544	-		SO3301	0.44	+0.3
3,446,544	-		SO3301	0.44	-0.6
3,446,550	-		SO3301	0.44	-0.3
3,446,551	-		SO3301	0.44	+0.6
3,446,551	-		SO3301	0.44	-0.4
3,446,551	-		SO3301	0.44	-0.0
3,446,558	+		SO3301	0.45	-0.7
3,446,558	+		SO3301	0.45	+0.0
3,446,591	+		SO3301	0.47	+0.2
3,446,592	-		SO3301	0.47	+0.2
3,446,599	-		SO3301	0.47	+0.7
3,446,601	+		SO3301	0.47	+0.2
3,446,612	+		SO3301	0.48	+0.3
3,446,617	+		SO3301	0.48	-0.1
3,446,622	+		SO3301	0.49	-0.2
3,446,622	+		SO3301	0.49	+0.1
3,446,622	+		SO3301	0.49	-0.5
3,446,624	+		SO3301	0.49	+0.1
3,446,624	+		SO3301	0.49	-1.1
3,446,625	-		SO3301	0.49	-0.0
3,446,625	-		SO3301	0.49	-0.2
3,446,630	-		SO3301	0.49	+0.4
3,446,630	-		SO3301	0.49	+2.5
3,446,630	-		SO3301	0.49	-0.3
3,446,630	-		SO3301	0.49	+1.0
3,446,632	-		SO3301	0.49	-0.3
3,446,632	-		SO3301	0.49	+0.6
3,446,642	-		SO3301	0.50	+0.1
3,446,691	+		SO3301	0.53	+0.1
3,446,783	+		SO3301	0.60	+0.5
3,446,783	+		SO3301	0.60	+0.5
3,446,783	+		SO3301	0.60	+0.1
3,446,783	+		SO3301	0.60	+0.9
3,446,791	-		SO3301	0.60	+0.4
3,446,791	-		SO3301	0.60	+0.7
3,446,791	-		SO3301	0.60	-0.3
3,446,791	-		SO3301	0.60	-0.5
3,446,791	-		SO3301	0.60	+0.2
3,446,793	+		SO3301	0.60	+0.3
3,446,851	+		SO3301	0.64	-0.2
3,446,852	+		SO3301	0.64	+2.4
3,446,858	-		SO3301	0.65	-0.6
3,446,859	-		SO3301	0.65	+0.4
3,446,861	+		SO3301	0.65	-0.3