Strain Fitness in Shewanella oneidensis MR-1 around SO1510

Experiment: L-Glutamine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Glutamine (N)
1,583,703	+		SO1508	0.75	-0.1
1,583,703	+		SO1508	0.75	+0.5
1,583,703	+		SO1508	0.75	-1.0
1,583,711	-		SO1508	0.77	+0.1
1,583,726	-		SO1508	0.81	-0.1
1,583,731	+		SO1508	0.83	+0.2
1,583,731	+		SO1508	0.83	+0.5
1,583,731	+		SO1508	0.83	+0.5
1,583,732	-				+1.6
1,583,733	+		SO1508	0.83	-0.1
1,583,733	+		SO1508	0.83	+1.0
1,583,739	-		SO1508	0.85	-0.0
1,583,739	-		SO1508	0.85	-1.8
1,583,739	-		SO1508	0.85	+0.2
1,583,739	-		SO1508	0.85	-0.1
1,583,739	-		SO1508	0.85	+0.5
1,583,739	-		SO1508	0.85	+0.6
1,583,741	-		SO1508	0.85	+0.3
1,583,746	-		SO1508	0.87	-0.3
1,583,771	-				-0.8
1,583,821	+				-1.3
1,583,821	+				-0.2
1,583,821	+				+0.1
1,583,829	-				-1.1
1,583,829	-				-0.3
1,583,829	-				-0.4
1,583,830	-				+1.4
1,583,834	+				+0.3
1,583,834	+				-0.7
1,583,834	+				+0.2
1,583,834	+				+0.4
1,583,865	+				+0.2
1,583,865	+				+0.5
1,583,873	-				-0.0
1,583,873	-				-1.4
1,583,887	-				+0.4
1,583,959	+		SO1508.1	0.15	-0.1
1,583,979	+		SO1508.1	0.19	+0.0
1,583,982	-		SO1508.1	0.20	+1.9
1,584,004	+		SO1508.1	0.24	+1.8
1,584,057	+		SO1508.1	0.34	-0.2
1,584,057	+		SO1508.1	0.34	+0.1
1,584,064	-		SO1508.1	0.36	-0.8
1,584,065	+		SO1508.1	0.36	-0.6
1,584,065	-		SO1508.1	0.36	+0.1
1,584,065	-		SO1508.1	0.36	-0.8
1,584,065	-		SO1508.1	0.36	-0.5
1,584,065	-		SO1508.1	0.36	-0.4
1,584,073	+		SO1508.1	0.37	-0.4
1,584,073	-		SO1508.1	0.37	+0.0
1,584,084	+		SO1508.1	0.40	+0.7
1,584,084	+		SO1508.1	0.40	+0.4
1,584,084	-		SO1508.1	0.40	-0.3
1,584,091	+		SO1508.1	0.41	-0.2
1,584,091	+		SO1508.1	0.41	+0.6
1,584,092	-		SO1508.1	0.41	+0.8
1,584,092	-		SO1508.1	0.41	+0.2
1,584,092	-		SO1508.1	0.41	-0.5
1,584,092	-		SO1508.1	0.41	+1.4
1,584,094	-		SO1508.1	0.42	+0.3
1,584,101	-		SO1508.1	0.43	+0.5
1,584,132	-		SO1508.1	0.49	-0.2
1,584,159	+		SO1508.1	0.54	+1.0
1,584,159	+		SO1508.1	0.54	+0.9
1,584,159	+		SO1508.1	0.54	+0.0
1,584,159	+		SO1508.1	0.54	+0.2
1,584,159	+		SO1508.1	0.54	+0.9
1,584,167	-		SO1508.1	0.56	+0.5
1,584,167	-		SO1508.1	0.56	-0.2
1,584,167	-		SO1508.1	0.56	+0.3
1,584,167	-		SO1508.1	0.56	+0.3
1,584,169	+		SO1508.1	0.56	+0.9
1,584,174	+		SO1508.1	0.57	+0.8
1,584,180	+		SO1508.1	0.58	+0.4
1,584,180	+		SO1508.1	0.58	+0.0
1,584,180	+		SO1508.1	0.58	-0.4
1,584,188	-		SO1508.1	0.60	-1.0
1,584,188	-		SO1508.1	0.60	+1.3
1,584,188	-		SO1508.1	0.60	+0.1
1,584,188	-		SO1508.1	0.60	-0.4
1,584,188	-		SO1508.1	0.60	+0.7
1,584,188	-		SO1508.1	0.60	+0.0
1,584,188	-		SO1508.1	0.60	-0.5
1,584,188	-		SO1508.1	0.60	-0.1
1,584,203	-		SO1508.1	0.63	+0.3
1,584,221	+		SO1508.1	0.66	+0.3
1,584,221	+		SO1508.1	0.66	+1.5
1,584,221	+		SO1508.1	0.66	-1.3
1,584,221	+		SO1508.1	0.66	+0.2
1,584,221	+		SO1508.1	0.66	+0.1
1,584,221	+		SO1508.1	0.66	+0.5
1,584,221	+		SO1508.1	0.66	+0.9
1,584,221	+		SO1508.1	0.66	+1.1
1,584,224	-		SO1508.1	0.67	+0.6
1,584,228	-		SO1508.1	0.68	-0.4
1,584,228	-		SO1508.1	0.68	-0.1
1,584,228	-		SO1508.1	0.68	-0.0
1,584,235	+		SO1508.1	0.69	+1.2
1,584,236	-		SO1508.1	0.69	-0.2
1,584,236	-		SO1508.1	0.69	+0.4
1,584,239	+		SO1508.1	0.70	-0.9
1,584,241	+		SO1508.1	0.70	+0.5
1,584,241	+		SO1508.1	0.70	+0.4
1,584,241	-		SO1508.1	0.70	+0.2
1,584,249	-		SO1508.1	0.72	-0.3
1,584,249	-		SO1508.1	0.72	-0.1
1,584,273	-		SO1508.1	0.77	+0.3
1,584,275	+		SO1508.1	0.77	+0.3
1,584,275	+		SO1508.1	0.77	+0.3
1,584,275	+		SO1508.1	0.77	+1.6
1,584,275	+		SO1508.1	0.77	-0.4
1,584,275	+		SO1508.1	0.77	-0.0
1,584,275	+		SO1508.1	0.77	-0.3
1,584,275	+		SO1508.1	0.77	-0.2
1,584,275	+		SO1508.1	0.77	+0.4
1,584,275	+		SO1508.1	0.77	+0.3
1,584,280	+		SO1508.1	0.78	-0.6
1,584,283	-		SO1508.1	0.79	+0.3
1,584,283	-		SO1508.1	0.79	-0.5
1,584,283	-		SO1508.1	0.79	-0.3
1,584,283	-		SO1508.1	0.79	-0.2
1,584,283	-		SO1508.1	0.79	-0.8
1,584,285	+		SO1508.1	0.79	+0.9
1,584,316	+		SO1508.1	0.85	+0.5
1,584,319	-		SO1508.1	0.86	+0.4
1,584,319	-		SO1508.1	0.86	-0.1
1,584,319	-		SO1508.1	0.86	+0.2
1,584,319	-		SO1508.1	0.86	-0.0
1,584,324	-		SO1508.1	0.87	+0.8
1,584,324	-		SO1508.1	0.87	+1.8
1,584,364	+				+0.3
1,584,364	+				+0.0
1,584,364	+				+0.3
1,584,372	-				+0.5
1,584,430	+				+0.0
1,584,430	+				+0.3
1,584,435	-				+0.6
1,584,438	-				+1.5
1,584,446	-				-0.5
1,584,448	+				-0.5
1,584,448	+				+0.1
1,584,448	-				+0.1
1,584,451	-				-0.4
1,584,456	-				+0.2
1,584,456	-				+0.2
1,584,456	-				-0.1
1,584,456	-				-0.1
1,584,456	-				+0.1
1,584,456	-				+0.2
1,584,456	-				+0.1
1,584,459	-				+0.1
1,584,470	-				-0.3
1,584,476	-				+1.6
1,584,484	-				+0.6
1,584,494	-				-0.3
1,584,499	+				-0.9
1,584,518	+				-0.3
1,584,534	+				+0.5
1,584,542	-				+0.1
1,584,544	+				+1.1
1,584,549	+				-0.2
1,584,552	-				-0.3
1,584,567	-				+0.8
1,584,586	-				-0.2
1,584,587	-				+0.4
1,584,588	+				+0.7
1,584,593	-				+0.1
1,584,598	-				+1.8
1,584,598	-				-0.5
1,585,226	-		SO1510	0.55	-0.6
1,585,226	-		SO1510	0.55	-1.2
1,585,226	-		SO1510	0.55	-0.4
1,585,392	+		SO1510	0.72	-0.7
1,585,631	-				+0.3
1,585,921	-				+0.6