Experiment: Def sodium fluoride 25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0092 and Psest_0093 overlap by 4 nucleotides Psest_0093 and Psest_0094 overlap by 4 nucleotides Psest_0094 and Psest_0095 overlap by 1 nucleotides Psest_0095 and Psest_0096 overlap by 1 nucleotides
Psest_0092: Psest_0092 - phosphonate C-P lyase system protein PhnK, at 92,803 to 93,615
_0092
Psest_0093: Psest_0093 - Uncharacterized enzyme of phosphonate metabolism, at 93,612 to 94,481
_0093
Psest_0094: Psest_0094 - Uncharacterized enzyme of phosphonate metabolism, at 94,478 to 95,587
_0094
Psest_0095: Psest_0095 - phosphonate C-P lyase system protein PhnH, at 95,587 to 96,195
_0095
Psest_0096: Psest_0096 - phosphonate C-P lyase system protein PhnG, at 96,195 to 96,641
_0096
Position (kb)
94
95
96 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 93.715 kb on + strand, within Psest_0093 at 93.715 kb on + strand, within Psest_0093 at 93.715 kb on + strand, within Psest_0093 at 93.809 kb on - strand, within Psest_0093 at 93.809 kb on - strand, within Psest_0093 at 93.923 kb on - strand, within Psest_0093 at 93.952 kb on + strand, within Psest_0093 at 93.953 kb on - strand, within Psest_0093 at 94.096 kb on + strand, within Psest_0093 at 94.096 kb on + strand, within Psest_0093 at 94.096 kb on + strand, within Psest_0093 at 94.444 kb on + strand at 94.444 kb on + strand at 94.584 kb on + strand at 94.584 kb on + strand at 94.584 kb on + strand at 94.584 kb on + strand at 94.585 kb on - strand at 94.585 kb on - strand at 94.585 kb on - strand at 94.585 kb on - strand at 95.217 kb on + strand, within Psest_0094 at 95.217 kb on + strand, within Psest_0094 at 95.218 kb on - strand, within Psest_0094 at 95.218 kb on - strand, within Psest_0094 at 95.218 kb on - strand, within Psest_0094 at 95.583 kb on + strand at 95.583 kb on + strand at 95.583 kb on + strand at 95.583 kb on + strand at 95.583 kb on + strand at 95.583 kb on + strand at 95.583 kb on + strand at 95.583 kb on + strand at 95.583 kb on + strand at 95.583 kb on + strand at 95.584 kb on - strand at 95.584 kb on - strand at 95.584 kb on - strand at 95.584 kb on - strand at 95.584 kb on - strand at 95.584 kb on - strand at 95.584 kb on - strand at 95.584 kb on - strand at 95.584 kb on - strand at 95.855 kb on + strand, within Psest_0095 at 95.855 kb on + strand, within Psest_0095 at 95.855 kb on + strand, within Psest_0095 at 95.855 kb on + strand, within Psest_0095 at 95.856 kb on - strand, within Psest_0095 at 95.856 kb on - strand at 96.036 kb on - strand, within Psest_0095 at 96.394 kb on + strand, within Psest_0096 at 96.535 kb on + strand, within Psest_0096
Per-strain Table
Position Strand Gene LocusTag Fraction Def sodium fluoride 25 mM remove 93,715 + Psest_0093 0.12 +0.4 93,715 + Psest_0093 0.12 -0.1 93,715 + Psest_0093 0.12 +2.2 93,809 - Psest_0093 0.23 +1.4 93,809 - Psest_0093 0.23 +1.2 93,923 - Psest_0093 0.36 +2.2 93,952 + Psest_0093 0.39 -0.8 93,953 - Psest_0093 0.39 -1.6 94,096 + Psest_0093 0.56 +1.2 94,096 + Psest_0093 0.56 -0.4 94,096 + Psest_0093 0.56 +1.2 94,444 + +0.7 94,444 + +0.2 94,584 + +1.2 94,584 + +0.6 94,584 + +1.4 94,584 + +1.8 94,585 - -0.1 94,585 - -1.8 94,585 - -0.8 94,585 - +0.8 95,217 + Psest_0094 0.67 +0.8 95,217 + Psest_0094 0.67 +0.8 95,218 - Psest_0094 0.67 +0.6 95,218 - Psest_0094 0.67 +1.2 95,218 - Psest_0094 0.67 -0.6 95,583 + +1.2 95,583 + -0.4 95,583 + +2.8 95,583 + +0.9 95,583 + +2.2 95,583 + -0.4 95,583 + -0.8 95,583 + +1.2 95,583 + +1.2 95,583 + +0.2 95,584 - +1.2 95,584 - +1.2 95,584 - +1.2 95,584 - +0.5 95,584 - +1.1 95,584 - +0.2 95,584 - +0.1 95,584 - -0.4 95,584 - +1.2 95,855 + Psest_0095 0.44 +1.2 95,855 + Psest_0095 0.44 +0.2 95,855 + Psest_0095 0.44 +0.6 95,855 + Psest_0095 0.44 +1.2 95,856 - Psest_0095 0.44 +1.5 95,856 - +0.2 96,036 - Psest_0095 0.74 -0.4 96,394 + Psest_0096 0.45 -0.8 96,535 + Psest_0096 0.76 +2.2
Or see this region's nucleotide sequence