Experiment: Def sodium fluoride 25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_4321 and Psest_4322 are separated by 5 nucleotides Psest_4322 and Psest_4323 are separated by 155 nucleotides Psest_4323 and Psest_4324 are separated by 298 nucleotides
Psest_4321: Psest_4321 - conserved hypothetical metal-binding protein, at 4,521,518 to 4,521,796
_4321
Psest_4322: Psest_4322 - Domain of unknown function (DUF1835)./Protein of unknown function., at 4,521,802 to 4,522,578
_4322
Psest_4323: Psest_4323 - Predicted acyltransferases, at 4,522,734 to 4,523,804
_4323
Psest_4324: Psest_4324 - DNA repair photolyase, at 4,524,103 to 4,525,167
_4324
Position (kb)
4522
4523
4524 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4521.795 kb on - strand at 4521.902 kb on + strand, within Psest_4322 at 4522.104 kb on - strand, within Psest_4322 at 4522.104 kb on - strand, within Psest_4322 at 4522.104 kb on - strand, within Psest_4322 at 4522.104 kb on - strand, within Psest_4322 at 4522.104 kb on - strand, within Psest_4322 at 4522.240 kb on + strand, within Psest_4322 at 4522.240 kb on + strand, within Psest_4322 at 4522.240 kb on + strand, within Psest_4322 at 4522.240 kb on + strand, within Psest_4322 at 4522.240 kb on + strand, within Psest_4322 at 4522.240 kb on + strand, within Psest_4322 at 4522.240 kb on + strand, within Psest_4322 at 4522.241 kb on - strand, within Psest_4322 at 4522.241 kb on - strand, within Psest_4322 at 4522.241 kb on - strand, within Psest_4322 at 4522.241 kb on - strand, within Psest_4322 at 4522.241 kb on - strand, within Psest_4322 at 4522.243 kb on - strand, within Psest_4322 at 4522.243 kb on - strand, within Psest_4322 at 4522.255 kb on - strand, within Psest_4322 at 4522.255 kb on - strand, within Psest_4322 at 4522.255 kb on - strand, within Psest_4322 at 4522.523 kb on + strand at 4522.524 kb on - strand at 4522.906 kb on + strand, within Psest_4323 at 4522.907 kb on - strand, within Psest_4323 at 4522.907 kb on - strand, within Psest_4323 at 4522.907 kb on - strand, within Psest_4323 at 4522.907 kb on - strand, within Psest_4323 at 4522.936 kb on + strand, within Psest_4323 at 4522.936 kb on + strand, within Psest_4323 at 4522.936 kb on + strand, within Psest_4323 at 4522.936 kb on + strand, within Psest_4323 at 4522.936 kb on + strand, within Psest_4323 at 4522.937 kb on - strand, within Psest_4323 at 4522.937 kb on - strand, within Psest_4323 at 4522.937 kb on - strand, within Psest_4323 at 4522.942 kb on + strand, within Psest_4323 at 4522.942 kb on + strand, within Psest_4323 at 4522.942 kb on + strand, within Psest_4323 at 4522.942 kb on + strand, within Psest_4323 at 4522.943 kb on - strand, within Psest_4323 at 4522.943 kb on - strand, within Psest_4323 at 4522.951 kb on + strand, within Psest_4323 at 4522.966 kb on + strand, within Psest_4323 at 4522.966 kb on + strand, within Psest_4323 at 4522.967 kb on - strand, within Psest_4323 at 4523.011 kb on + strand, within Psest_4323 at 4523.012 kb on - strand, within Psest_4323 at 4523.023 kb on + strand, within Psest_4323 at 4523.024 kb on - strand, within Psest_4323 at 4523.041 kb on + strand, within Psest_4323 at 4523.042 kb on - strand, within Psest_4323 at 4523.042 kb on - strand, within Psest_4323 at 4523.158 kb on + strand, within Psest_4323 at 4523.158 kb on + strand, within Psest_4323 at 4523.158 kb on + strand, within Psest_4323 at 4523.159 kb on - strand, within Psest_4323 at 4523.161 kb on + strand, within Psest_4323 at 4523.161 kb on + strand, within Psest_4323 at 4523.161 kb on + strand, within Psest_4323 at 4523.197 kb on + strand, within Psest_4323 at 4523.317 kb on + strand, within Psest_4323 at 4523.317 kb on + strand, within Psest_4323 at 4523.317 kb on + strand, within Psest_4323 at 4523.317 kb on + strand, within Psest_4323 at 4523.317 kb on + strand, within Psest_4323 at 4523.317 kb on + strand, within Psest_4323 at 4523.317 kb on + strand, within Psest_4323 at 4523.317 kb on + strand, within Psest_4323 at 4523.317 kb on + strand, within Psest_4323 at 4523.317 kb on + strand, within Psest_4323 at 4523.317 kb on + strand, within Psest_4323 at 4523.317 kb on + strand, within Psest_4323 at 4523.318 kb on - strand, within Psest_4323 at 4523.318 kb on - strand, within Psest_4323 at 4523.318 kb on - strand, within Psest_4323 at 4523.318 kb on - strand, within Psest_4323 at 4523.318 kb on - strand, within Psest_4323 at 4523.318 kb on - strand, within Psest_4323 at 4523.318 kb on - strand, within Psest_4323 at 4523.318 kb on - strand, within Psest_4323 at 4523.318 kb on - strand, within Psest_4323 at 4523.318 kb on - strand, within Psest_4323 at 4523.318 kb on - strand, within Psest_4323 at 4523.318 kb on - strand, within Psest_4323 at 4523.318 kb on - strand, within Psest_4323 at 4523.318 kb on - strand, within Psest_4323 at 4523.318 kb on - strand, within Psest_4323 at 4523.318 kb on - strand, within Psest_4323 at 4523.318 kb on - strand, within Psest_4323 at 4523.318 kb on - strand, within Psest_4323 at 4523.318 kb on - strand, within Psest_4323 at 4523.371 kb on + strand, within Psest_4323 at 4523.372 kb on - strand, within Psest_4323 at 4523.434 kb on + strand, within Psest_4323 at 4523.435 kb on - strand, within Psest_4323 at 4523.435 kb on - strand, within Psest_4323 at 4523.435 kb on - strand, within Psest_4323 at 4523.435 kb on - strand, within Psest_4323 at 4523.559 kb on + strand, within Psest_4323 at 4523.662 kb on + strand, within Psest_4323 at 4523.714 kb on - strand at 4523.714 kb on - strand at 4523.717 kb on + strand at 4523.718 kb on - strand at 4523.718 kb on - strand at 4523.718 kb on - strand at 4523.718 kb on - strand at 4523.718 kb on - strand at 4523.718 kb on - strand at 4523.727 kb on + strand at 4523.861 kb on + strand at 4523.861 kb on + strand at 4523.861 kb on + strand at 4523.861 kb on + strand at 4523.861 kb on + strand at 4523.861 kb on + strand at 4523.861 kb on + strand at 4523.861 kb on + strand at 4523.861 kb on + strand at 4523.861 kb on + strand at 4523.861 kb on + strand at 4523.861 kb on + strand at 4523.861 kb on + strand at 4523.861 kb on + strand at 4523.861 kb on + strand at 4523.861 kb on + strand at 4523.861 kb on + strand at 4523.862 kb on - strand at 4523.862 kb on - strand at 4523.862 kb on - strand at 4523.862 kb on - strand at 4523.862 kb on - strand at 4523.862 kb on - strand at 4523.862 kb on - strand at 4523.864 kb on + strand at 4523.864 kb on + strand at 4524.066 kb on - strand at 4524.066 kb on - strand at 4524.070 kb on + strand at 4524.070 kb on + strand at 4524.070 kb on + strand at 4524.071 kb on - strand at 4524.071 kb on - strand at 4524.071 kb on - strand at 4524.071 kb on - strand at 4524.071 kb on - strand at 4524.084 kb on - strand at 4524.100 kb on - strand at 4524.100 kb on - strand at 4524.236 kb on + strand, within Psest_4324 at 4524.237 kb on - strand, within Psest_4324 at 4524.237 kb on - strand, within Psest_4324 at 4524.237 kb on - strand, within Psest_4324 at 4524.237 kb on - strand, within Psest_4324 at 4524.237 kb on - strand, within Psest_4324 at 4524.340 kb on + strand, within Psest_4324 at 4524.340 kb on + strand, within Psest_4324 at 4524.340 kb on + strand, within Psest_4324 at 4524.341 kb on - strand, within Psest_4324 at 4524.341 kb on - strand, within Psest_4324 at 4524.341 kb on - strand, within Psest_4324 at 4524.341 kb on - strand, within Psest_4324 at 4524.341 kb on - strand, within Psest_4324 at 4524.505 kb on + strand, within Psest_4324 at 4524.505 kb on + strand, within Psest_4324 at 4524.744 kb on - strand, within Psest_4324
Per-strain Table
Position Strand Gene LocusTag Fraction Def sodium fluoride 25 mM remove 4,521,795 - -0.8 4,521,902 + Psest_4322 0.13 +0.5 4,522,104 - Psest_4322 0.39 -0.5 4,522,104 - Psest_4322 0.39 -0.6 4,522,104 - Psest_4322 0.39 -0.6 4,522,104 - Psest_4322 0.39 -1.8 4,522,104 - Psest_4322 0.39 +0.6 4,522,240 + Psest_4322 0.56 -0.6 4,522,240 + Psest_4322 0.56 +0.4 4,522,240 + Psest_4322 0.56 -1.7 4,522,240 + Psest_4322 0.56 -1.5 4,522,240 + Psest_4322 0.56 -1.1 4,522,240 + Psest_4322 0.56 -0.8 4,522,240 + Psest_4322 0.56 +1.2 4,522,241 - Psest_4322 0.56 -0.8 4,522,241 - Psest_4322 0.56 -0.2 4,522,241 - Psest_4322 0.56 -0.1 4,522,241 - Psest_4322 0.56 +0.4 4,522,241 - Psest_4322 0.56 +2.0 4,522,243 - Psest_4322 0.57 -1.3 4,522,243 - Psest_4322 0.57 -0.6 4,522,255 - Psest_4322 0.58 +1.2 4,522,255 - Psest_4322 0.58 +1.2 4,522,255 - Psest_4322 0.58 +0.5 4,522,523 + -1.3 4,522,524 - +1.0 4,522,906 + Psest_4323 0.16 +0.5 4,522,907 - Psest_4323 0.16 +0.1 4,522,907 - Psest_4323 0.16 +0.6 4,522,907 - Psest_4323 0.16 -0.0 4,522,907 - Psest_4323 0.16 -1.4 4,522,936 + Psest_4323 0.19 +1.7 4,522,936 + Psest_4323 0.19 -0.0 4,522,936 + Psest_4323 0.19 +1.1 4,522,936 + Psest_4323 0.19 +0.2 4,522,936 + Psest_4323 0.19 -2.1 4,522,937 - Psest_4323 0.19 +1.2 4,522,937 - Psest_4323 0.19 +1.2 4,522,937 - Psest_4323 0.19 +0.9 4,522,942 + Psest_4323 0.19 -1.4 4,522,942 + Psest_4323 0.19 +0.6 4,522,942 + Psest_4323 0.19 +0.8 4,522,942 + Psest_4323 0.19 +0.5 4,522,943 - Psest_4323 0.20 +0.7 4,522,943 - Psest_4323 0.20 +1.0 4,522,951 + Psest_4323 0.20 +0.6 4,522,966 + Psest_4323 0.22 +0.2 4,522,966 + Psest_4323 0.22 +0.6 4,522,967 - Psest_4323 0.22 +1.0 4,523,011 + Psest_4323 0.26 +0.1 4,523,012 - Psest_4323 0.26 +2.6 4,523,023 + Psest_4323 0.27 +0.2 4,523,024 - Psest_4323 0.27 +0.6 4,523,041 + Psest_4323 0.29 -1.2 4,523,042 - Psest_4323 0.29 +0.3 4,523,042 - Psest_4323 0.29 +0.7 4,523,158 + Psest_4323 0.40 +0.7 4,523,158 + Psest_4323 0.40 +1.1 4,523,158 + Psest_4323 0.40 -0.1 4,523,159 - Psest_4323 0.40 +0.5 4,523,161 + Psest_4323 0.40 +0.5 4,523,161 + Psest_4323 0.40 +1.5 4,523,161 + Psest_4323 0.40 -0.0 4,523,197 + Psest_4323 0.43 +0.6 4,523,317 + Psest_4323 0.54 +1.0 4,523,317 + Psest_4323 0.54 +0.6 4,523,317 + Psest_4323 0.54 -0.5 4,523,317 + Psest_4323 0.54 +0.7 4,523,317 + Psest_4323 0.54 +2.2 4,523,317 + Psest_4323 0.54 +0.5 4,523,317 + Psest_4323 0.54 +1.2 4,523,317 + Psest_4323 0.54 +1.8 4,523,317 + Psest_4323 0.54 +0.4 4,523,317 + Psest_4323 0.54 -2.0 4,523,317 + Psest_4323 0.54 +1.0 4,523,317 + Psest_4323 0.54 +0.9 4,523,318 - Psest_4323 0.55 -0.6 4,523,318 - Psest_4323 0.55 +0.4 4,523,318 - Psest_4323 0.55 +1.6 4,523,318 - Psest_4323 0.55 +1.2 4,523,318 - Psest_4323 0.55 +0.2 4,523,318 - Psest_4323 0.55 -1.4 4,523,318 - Psest_4323 0.55 +1.6 4,523,318 - Psest_4323 0.55 -1.0 4,523,318 - Psest_4323 0.55 -0.4 4,523,318 - Psest_4323 0.55 +0.1 4,523,318 - Psest_4323 0.55 +0.9 4,523,318 - Psest_4323 0.55 -0.1 4,523,318 - Psest_4323 0.55 -0.1 4,523,318 - Psest_4323 0.55 +0.9 4,523,318 - Psest_4323 0.55 +0.2 4,523,318 - Psest_4323 0.55 +0.7 4,523,318 - Psest_4323 0.55 +0.2 4,523,318 - Psest_4323 0.55 -0.5 4,523,318 - Psest_4323 0.55 +0.0 4,523,371 + Psest_4323 0.59 +0.6 4,523,372 - Psest_4323 0.60 +1.4 4,523,434 + Psest_4323 0.65 +0.4 4,523,435 - Psest_4323 0.65 +0.5 4,523,435 - Psest_4323 0.65 +0.8 4,523,435 - Psest_4323 0.65 +0.4 4,523,435 - Psest_4323 0.65 +0.6 4,523,559 + Psest_4323 0.77 +1.0 4,523,662 + Psest_4323 0.87 -0.3 4,523,714 - +0.3 4,523,714 - +0.1 4,523,717 + +0.7 4,523,718 - +0.2 4,523,718 - -1.0 4,523,718 - -0.9 4,523,718 - +1.1 4,523,718 - +0.7 4,523,718 - +0.2 4,523,727 + -1.1 4,523,861 + +1.2 4,523,861 + -1.1 4,523,861 + +0.3 4,523,861 + -0.2 4,523,861 + +0.8 4,523,861 + +0.1 4,523,861 + -0.2 4,523,861 + +0.1 4,523,861 + -1.8 4,523,861 + +0.7 4,523,861 + +0.4 4,523,861 + +0.8 4,523,861 + -1.7 4,523,861 + -0.3 4,523,861 + +0.1 4,523,861 + -1.1 4,523,861 + +0.2 4,523,862 - +0.6 4,523,862 - -0.6 4,523,862 - -1.1 4,523,862 - -0.7 4,523,862 - -0.4 4,523,862 - -2.4 4,523,862 - -1.6 4,523,864 + +0.4 4,523,864 + +0.7 4,524,066 - +0.1 4,524,066 - +0.4 4,524,070 + -0.7 4,524,070 + +0.9 4,524,070 + +0.1 4,524,071 - +0.3 4,524,071 - -0.0 4,524,071 - -0.6 4,524,071 - -0.4 4,524,071 - -0.7 4,524,084 - -0.0 4,524,100 - +1.8 4,524,100 - -0.1 4,524,236 + Psest_4324 0.12 +0.4 4,524,237 - Psest_4324 0.13 -1.1 4,524,237 - Psest_4324 0.13 +0.6 4,524,237 - Psest_4324 0.13 -0.2 4,524,237 - Psest_4324 0.13 +0.2 4,524,237 - Psest_4324 0.13 -0.3 4,524,340 + Psest_4324 0.22 +0.4 4,524,340 + Psest_4324 0.22 -0.3 4,524,340 + Psest_4324 0.22 -0.3 4,524,341 - Psest_4324 0.22 -0.3 4,524,341 - Psest_4324 0.22 -0.7 4,524,341 - Psest_4324 0.22 +1.2 4,524,341 - Psest_4324 0.22 +0.6 4,524,341 - Psest_4324 0.22 -0.4 4,524,505 + Psest_4324 0.38 +0.5 4,524,505 + Psest_4324 0.38 -1.5 4,524,744 - Psest_4324 0.60 +0.2
Or see this region's nucleotide sequence