Experiment: Def sodium fluoride 25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_4263 and Psest_4264 overlap by 4 nucleotides Psest_4264 and Psest_4265 overlap by 4 nucleotides Psest_4265 and Psest_4266 are separated by 127 nucleotides
Psest_4263: Psest_4263 - glucose-1-phosphate thymidylyltransferase, short form, at 4,452,749 to 4,453,621
_4263
Psest_4264: Psest_4264 - dTDP-4-dehydrorhamnose 3,5-epimerase, at 4,453,618 to 4,454,163
_4264
Psest_4265: Psest_4265 - dTDP-4-dehydrorhamnose reductase, at 4,454,160 to 4,455,068
_4265
Psest_4266: Psest_4266 - Signal transduction histidine kinase regulating C4-dicarboxylate transport system, at 4,455,196 to 4,457,001
_4266
Position (kb) 4454
4455
4456 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 4454.331 kb on + strand, within Psest_4265 at 4454.331 kb on + strand, within Psest_4265 at 4454.331 kb on + strand, within Psest_4265 at 4454.332 kb on - strand, within Psest_4265 at 4454.333 kb on + strand, within Psest_4265 at 4454.334 kb on - strand, within Psest_4265 at 4454.445 kb on + strand, within Psest_4265 at 4454.446 kb on - strand, within Psest_4265 at 4454.457 kb on + strand, within Psest_4265 at 4454.457 kb on + strand, within Psest_4265 at 4454.457 kb on + strand, within Psest_4265 at 4454.457 kb on + strand, within Psest_4265 at 4454.458 kb on - strand, within Psest_4265 at 4454.458 kb on - strand, within Psest_4265 at 4454.458 kb on - strand, within Psest_4265 at 4454.487 kb on + strand, within Psest_4265 at 4454.487 kb on + strand, within Psest_4265 at 4454.488 kb on - strand, within Psest_4265 at 4454.488 kb on - strand, within Psest_4265 at 4454.522 kb on - strand, within Psest_4265 at 4454.522 kb on - strand, within Psest_4265 at 4454.522 kb on - strand, within Psest_4265 at 4454.523 kb on + strand, within Psest_4265 at 4454.578 kb on - strand, within Psest_4265 at 4454.578 kb on - strand, within Psest_4265 at 4454.578 kb on - strand, within Psest_4265 at 4454.578 kb on - strand, within Psest_4265 at 4454.605 kb on - strand, within Psest_4265 at 4454.781 kb on + strand, within Psest_4265 at 4454.781 kb on + strand, within Psest_4265 at 4455.168 kb on - strand at 4455.301 kb on + strand at 4455.302 kb on - strand at 4455.349 kb on + strand at 4455.349 kb on + strand at 4455.349 kb on + strand at 4455.350 kb on - strand at 4455.350 kb on - strand at 4455.350 kb on - strand at 4455.350 kb on - strand at 4455.481 kb on - strand, within Psest_4266 at 4455.481 kb on - strand, within Psest_4266 at 4455.517 kb on + strand, within Psest_4266 at 4455.517 kb on + strand, within Psest_4266 at 4455.517 kb on + strand, within Psest_4266 at 4455.518 kb on - strand, within Psest_4266 at 4455.518 kb on - strand, within Psest_4266 at 4455.518 kb on - strand, within Psest_4266 at 4455.518 kb on - strand, within Psest_4266 at 4455.682 kb on + strand, within Psest_4266 at 4455.683 kb on - strand, within Psest_4266 at 4455.683 kb on - strand, within Psest_4266 at 4455.683 kb on - strand, within Psest_4266 at 4455.683 kb on - strand, within Psest_4266 at 4456.001 kb on + strand, within Psest_4266 at 4456.001 kb on + strand, within Psest_4266 at 4456.001 kb on + strand, within Psest_4266 at 4456.002 kb on - strand, within Psest_4266
Per-strain Table
Position Strand Gene LocusTag Fraction Def sodium fluoride 25 mM remove 4,454,331 + Psest_4265 0.19 -0.8 4,454,331 + Psest_4265 0.19 -1.6 4,454,331 + Psest_4265 0.19 +0.2 4,454,332 - Psest_4265 0.19 +0.5 4,454,333 + Psest_4265 0.19 -0.1 4,454,334 - Psest_4265 0.19 +1.2 4,454,445 + Psest_4265 0.31 +0.5 4,454,446 - Psest_4265 0.31 +0.8 4,454,457 + Psest_4265 0.33 +4.2 4,454,457 + Psest_4265 0.33 +2.0 4,454,457 + Psest_4265 0.33 +0.6 4,454,457 + Psest_4265 0.33 +1.4 4,454,458 - Psest_4265 0.33 +1.0 4,454,458 - Psest_4265 0.33 +0.8 4,454,458 - Psest_4265 0.33 +0.5 4,454,487 + Psest_4265 0.36 +0.4 4,454,487 + Psest_4265 0.36 +0.2 4,454,488 - Psest_4265 0.36 -0.2 4,454,488 - Psest_4265 0.36 +0.5 4,454,522 - Psest_4265 0.40 +0.1 4,454,522 - Psest_4265 0.40 +1.2 4,454,522 - Psest_4265 0.40 +1.2 4,454,523 + Psest_4265 0.40 +0.1 4,454,578 - Psest_4265 0.46 +1.0 4,454,578 - Psest_4265 0.46 -0.5 4,454,578 - Psest_4265 0.46 +1.2 4,454,578 - Psest_4265 0.46 +0.1 4,454,605 - Psest_4265 0.49 +1.2 4,454,781 + Psest_4265 0.68 +0.5 4,454,781 + Psest_4265 0.68 +2.2 4,455,168 - +0.8 4,455,301 + +0.6 4,455,302 - -1.1 4,455,349 + -1.5 4,455,349 + +1.2 4,455,349 + +0.6 4,455,350 - +0.2 4,455,350 - -0.5 4,455,350 - -0.1 4,455,350 - +0.5 4,455,481 - Psest_4266 0.16 +0.5 4,455,481 - Psest_4266 0.16 -0.2 4,455,517 + Psest_4266 0.18 +1.0 4,455,517 + Psest_4266 0.18 +0.6 4,455,517 + Psest_4266 0.18 +0.1 4,455,518 - Psest_4266 0.18 -0.5 4,455,518 - Psest_4266 0.18 +3.5 4,455,518 - Psest_4266 0.18 -0.7 4,455,518 - Psest_4266 0.18 +0.9 4,455,682 + Psest_4266 0.27 +0.2 4,455,683 - Psest_4266 0.27 -0.4 4,455,683 - Psest_4266 0.27 +0.9 4,455,683 - Psest_4266 0.27 -1.0 4,455,683 - Psest_4266 0.27 +0.2 4,456,001 + Psest_4266 0.45 +0.9 4,456,001 + Psest_4266 0.45 +2.2 4,456,001 + Psest_4266 0.45 +0.2 4,456,002 - Psest_4266 0.45 +0.5
Or see this region's nucleotide sequence