Experiment: Def sodium fluoride 25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_4256 and Psest_4257 are separated by 2 nucleotides Psest_4257 and Psest_4258 overlap by 4 nucleotides Psest_4258 and Psest_4259 are separated by 117 nucleotides
Psest_4256: Psest_4256 - ABC-type transport system involved in resistance to organic solvents, ATPase component, at 4,444,073 to 4,444,858
_4256
Psest_4257: Psest_4257 - ABC-type transport system involved in resistance to organic solvents, periplasmic component, at 4,444,861 to 4,445,799
_4257
Psest_4258: Psest_4258 - ABC-type uncharacterized transport system, auxiliary component, at 4,445,796 to 4,446,419
_4258
Psest_4259: Psest_4259 - Multidrug resistance efflux pump, at 4,446,537 to 4,447,613
_4259
Position (kb) 4445
4446
4447 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 4444.799 kb on + strand at 4444.799 kb on + strand at 4444.799 kb on + strand at 4444.800 kb on - strand at 4444.800 kb on - strand at 4444.800 kb on - strand at 4444.905 kb on - strand at 4444.969 kb on + strand, within Psest_4257 at 4444.969 kb on + strand, within Psest_4257 at 4444.975 kb on + strand, within Psest_4257 at 4444.975 kb on + strand, within Psest_4257 at 4444.976 kb on - strand, within Psest_4257 at 4444.976 kb on - strand, within Psest_4257 at 4444.976 kb on - strand, within Psest_4257 at 4444.976 kb on - strand, within Psest_4257 at 4444.976 kb on - strand, within Psest_4257 at 4444.976 kb on - strand, within Psest_4257 at 4444.976 kb on - strand, within Psest_4257 at 4444.979 kb on - strand, within Psest_4257 at 4444.979 kb on - strand, within Psest_4257 at 4445.035 kb on + strand, within Psest_4257 at 4445.035 kb on + strand, within Psest_4257 at 4445.035 kb on + strand, within Psest_4257 at 4445.036 kb on - strand, within Psest_4257 at 4445.119 kb on + strand, within Psest_4257 at 4445.119 kb on + strand, within Psest_4257 at 4445.120 kb on - strand, within Psest_4257 at 4445.895 kb on + strand, within Psest_4258 at 4445.896 kb on - strand, within Psest_4258 at 4445.896 kb on - strand, within Psest_4258 at 4445.896 kb on - strand, within Psest_4258 at 4446.039 kb on + strand, within Psest_4258 at 4446.040 kb on - strand, within Psest_4258 at 4446.198 kb on + strand, within Psest_4258 at 4446.198 kb on + strand, within Psest_4258 at 4446.199 kb on - strand, within Psest_4258 at 4446.501 kb on + strand at 4446.526 kb on - strand at 4447.290 kb on + strand, within Psest_4259 at 4447.290 kb on + strand, within Psest_4259 at 4447.290 kb on + strand, within Psest_4259 at 4447.290 kb on + strand, within Psest_4259 at 4447.290 kb on + strand, within Psest_4259 at 4447.290 kb on + strand, within Psest_4259 at 4447.290 kb on + strand, within Psest_4259 at 4447.291 kb on - strand, within Psest_4259 at 4447.291 kb on - strand, within Psest_4259 at 4447.291 kb on - strand, within Psest_4259 at 4447.291 kb on - strand, within Psest_4259 at 4447.291 kb on - strand, within Psest_4259 at 4447.377 kb on + strand, within Psest_4259 at 4447.378 kb on - strand, within Psest_4259 at 4447.378 kb on - strand, within Psest_4259 at 4447.378 kb on - strand, within Psest_4259 at 4447.401 kb on + strand, within Psest_4259 at 4447.401 kb on + strand, within Psest_4259 at 4447.401 kb on + strand, within Psest_4259 at 4447.401 kb on + strand, within Psest_4259 at 4447.401 kb on + strand, within Psest_4259 at 4447.401 kb on + strand, within Psest_4259 at 4447.401 kb on + strand, within Psest_4259 at 4447.401 kb on + strand, within Psest_4259 at 4447.401 kb on + strand, within Psest_4259 at 4447.402 kb on - strand, within Psest_4259 at 4447.402 kb on - strand, within Psest_4259 at 4447.402 kb on - strand, within Psest_4259 at 4447.402 kb on - strand, within Psest_4259 at 4447.402 kb on - strand, within Psest_4259 at 4447.402 kb on - strand, within Psest_4259 at 4447.402 kb on - strand, within Psest_4259 at 4447.402 kb on - strand, within Psest_4259 at 4447.402 kb on - strand, within Psest_4259 at 4447.402 kb on - strand, within Psest_4259 at 4447.402 kb on - strand, within Psest_4259 at 4447.402 kb on - strand, within Psest_4259 at 4447.402 kb on - strand, within Psest_4259 at 4447.402 kb on - strand, within Psest_4259 at 4447.402 kb on - strand, within Psest_4259 at 4447.402 kb on - strand, within Psest_4259 at 4447.402 kb on - strand, within Psest_4259
Per-strain Table
Position Strand Gene LocusTag Fraction Def sodium fluoride 25 mM remove 4,444,799 + +1.5 4,444,799 + +0.2 4,444,799 + -0.6 4,444,800 - -0.2 4,444,800 - +0.9 4,444,800 - +0.2 4,444,905 - +2.2 4,444,969 + Psest_4257 0.12 +1.2 4,444,969 + Psest_4257 0.12 +0.3 4,444,975 + Psest_4257 0.12 -0.9 4,444,975 + Psest_4257 0.12 -0.4 4,444,976 - Psest_4257 0.12 +0.2 4,444,976 - Psest_4257 0.12 -0.6 4,444,976 - Psest_4257 0.12 +0.9 4,444,976 - Psest_4257 0.12 +1.2 4,444,976 - Psest_4257 0.12 +0.9 4,444,976 - Psest_4257 0.12 +0.5 4,444,976 - Psest_4257 0.12 -1.4 4,444,979 - Psest_4257 0.13 +0.1 4,444,979 - Psest_4257 0.13 -0.4 4,445,035 + Psest_4257 0.19 +0.8 4,445,035 + Psest_4257 0.19 +0.1 4,445,035 + Psest_4257 0.19 +0.9 4,445,036 - Psest_4257 0.19 +0.8 4,445,119 + Psest_4257 0.27 +0.4 4,445,119 + Psest_4257 0.27 +1.2 4,445,120 - Psest_4257 0.28 -0.4 4,445,895 + Psest_4258 0.16 +2.3 4,445,896 - Psest_4258 0.16 -0.1 4,445,896 - Psest_4258 0.16 +0.2 4,445,896 - Psest_4258 0.16 +2.8 4,446,039 + Psest_4258 0.39 +0.2 4,446,040 - Psest_4258 0.39 +0.8 4,446,198 + Psest_4258 0.64 -0.3 4,446,198 + Psest_4258 0.64 +1.3 4,446,199 - Psest_4258 0.65 -0.1 4,446,501 + -1.8 4,446,526 - -0.2 4,447,290 + Psest_4259 0.70 +1.0 4,447,290 + Psest_4259 0.70 -1.4 4,447,290 + Psest_4259 0.70 +0.2 4,447,290 + Psest_4259 0.70 +1.8 4,447,290 + Psest_4259 0.70 +1.2 4,447,290 + Psest_4259 0.70 -0.7 4,447,290 + Psest_4259 0.70 +1.2 4,447,291 - Psest_4259 0.70 +0.4 4,447,291 - Psest_4259 0.70 +1.2 4,447,291 - Psest_4259 0.70 -0.4 4,447,291 - Psest_4259 0.70 +3.2 4,447,291 - Psest_4259 0.70 +1.2 4,447,377 + Psest_4259 0.78 +1.2 4,447,378 - Psest_4259 0.78 +0.2 4,447,378 - Psest_4259 0.78 +1.6 4,447,378 - Psest_4259 0.78 -1.1 4,447,401 + Psest_4259 0.80 +0.2 4,447,401 + Psest_4259 0.80 -1.1 4,447,401 + Psest_4259 0.80 +1.8 4,447,401 + Psest_4259 0.80 +0.8 4,447,401 + Psest_4259 0.80 -0.4 4,447,401 + Psest_4259 0.80 -1.4 4,447,401 + Psest_4259 0.80 -2.5 4,447,401 + Psest_4259 0.80 +0.6 4,447,401 + Psest_4259 0.80 +1.2 4,447,402 - Psest_4259 0.80 +1.0 4,447,402 - Psest_4259 0.80 +0.2 4,447,402 - Psest_4259 0.80 -1.3 4,447,402 - Psest_4259 0.80 -2.0 4,447,402 - Psest_4259 0.80 +0.2 4,447,402 - Psest_4259 0.80 -1.3 4,447,402 - Psest_4259 0.80 -0.1 4,447,402 - Psest_4259 0.80 +0.2 4,447,402 - Psest_4259 0.80 +0.5 4,447,402 - Psest_4259 0.80 +1.2 4,447,402 - Psest_4259 0.80 +1.6 4,447,402 - Psest_4259 0.80 +1.2 4,447,402 - Psest_4259 0.80 +0.2 4,447,402 - Psest_4259 0.80 +1.2 4,447,402 - Psest_4259 0.80 +1.2 4,447,402 - Psest_4259 0.80 -2.6 4,447,402 - Psest_4259 0.80 +1.8
Or see this region's nucleotide sequence