Experiment: Def sodium fluoride 25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3802 and Psest_3803 are separated by 3 nucleotides Psest_3803 and Psest_3804 are separated by 138 nucleotides
Psest_3802: Psest_3802 - hypothetical protein, at 3,971,944 to 3,973,287
_3802
Psest_3803: Psest_3803 - DNA repair protein radc, at 3,973,291 to 3,973,965
_3803
Psest_3804: Psest_3804 - phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic, at 3,974,104 to 3,975,312
_3804
Position (kb)
3973
3974 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3972.301 kb on + strand, within Psest_3802 at 3972.301 kb on + strand, within Psest_3802 at 3972.302 kb on - strand, within Psest_3802 at 3972.302 kb on - strand, within Psest_3802 at 3972.379 kb on + strand, within Psest_3802 at 3972.380 kb on - strand, within Psest_3802 at 3972.397 kb on + strand, within Psest_3802 at 3972.397 kb on + strand, within Psest_3802 at 3972.397 kb on + strand, within Psest_3802 at 3972.397 kb on + strand, within Psest_3802 at 3972.397 kb on + strand, within Psest_3802 at 3972.397 kb on + strand, within Psest_3802 at 3972.398 kb on - strand, within Psest_3802 at 3972.398 kb on - strand, within Psest_3802 at 3972.398 kb on - strand, within Psest_3802 at 3972.435 kb on - strand, within Psest_3802 at 3972.833 kb on - strand, within Psest_3802 at 3972.833 kb on - strand, within Psest_3802 at 3972.833 kb on - strand, within Psest_3802 at 3972.834 kb on + strand, within Psest_3802 at 3972.863 kb on + strand, within Psest_3802 at 3972.863 kb on + strand, within Psest_3802 at 3972.864 kb on - strand, within Psest_3802 at 3973.305 kb on - strand at 3973.447 kb on - strand, within Psest_3803 at 3973.632 kb on - strand, within Psest_3803 at 3973.957 kb on + strand at 3973.957 kb on + strand at 3973.957 kb on + strand at 3973.957 kb on + strand at 3973.957 kb on + strand at 3973.957 kb on + strand at 3973.957 kb on + strand at 3973.957 kb on + strand at 3973.957 kb on + strand at 3973.957 kb on + strand at 3973.957 kb on + strand at 3973.957 kb on + strand at 3973.957 kb on + strand at 3973.957 kb on + strand at 3973.957 kb on + strand at 3973.957 kb on + strand at 3973.958 kb on - strand at 3973.958 kb on - strand at 3974.014 kb on + strand at 3974.019 kb on + strand at 3974.103 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Def sodium fluoride 25 mM remove 3,972,301 + Psest_3802 0.27 -0.0 3,972,301 + Psest_3802 0.27 +1.3 3,972,302 - Psest_3802 0.27 -0.8 3,972,302 - Psest_3802 0.27 +0.3 3,972,379 + Psest_3802 0.32 -0.8 3,972,380 - Psest_3802 0.32 -1.1 3,972,397 + Psest_3802 0.34 +0.9 3,972,397 + Psest_3802 0.34 +0.1 3,972,397 + Psest_3802 0.34 +0.5 3,972,397 + Psest_3802 0.34 +0.4 3,972,397 + Psest_3802 0.34 +0.6 3,972,397 + Psest_3802 0.34 -0.1 3,972,398 - Psest_3802 0.34 -0.5 3,972,398 - Psest_3802 0.34 +1.1 3,972,398 - Psest_3802 0.34 -0.8 3,972,435 - Psest_3802 0.37 -0.9 3,972,833 - Psest_3802 0.66 +0.7 3,972,833 - Psest_3802 0.66 +0.9 3,972,833 - Psest_3802 0.66 -0.8 3,972,834 + Psest_3802 0.66 -2.7 3,972,863 + Psest_3802 0.68 +0.7 3,972,863 + Psest_3802 0.68 -3.0 3,972,864 - Psest_3802 0.68 +2.0 3,973,305 - -0.4 3,973,447 - Psest_3803 0.23 +1.2 3,973,632 - Psest_3803 0.51 -0.2 3,973,957 + +0.8 3,973,957 + +1.4 3,973,957 + +1.8 3,973,957 + -0.7 3,973,957 + +0.5 3,973,957 + -1.2 3,973,957 + +2.1 3,973,957 + -1.0 3,973,957 + +1.1 3,973,957 + +0.5 3,973,957 + +0.5 3,973,957 + +0.5 3,973,957 + -1.7 3,973,957 + -0.9 3,973,957 + +0.0 3,973,957 + +1.0 3,973,958 - +0.2 3,973,958 - -1.3 3,974,014 + -0.5 3,974,019 + +0.6 3,974,103 + -0.9
Or see this region's nucleotide sequence