Experiment: Def sodium fluoride 25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3698 and Psest_3699 overlap by 14 nucleotides Psest_3699 and Psest_3700 are separated by 10 nucleotides Psest_3700 and Psest_3701 overlap by 4 nucleotides
Psest_3698: Psest_3698 - Predicted exporter, at 3,861,284 to 3,863,632
_3698
Psest_3699: Psest_3699 - Dehydrogenases (flavoproteins), at 3,863,619 to 3,864,869
_3699
Psest_3700: Psest_3700 - hypothetical protein, at 3,864,880 to 3,865,386
_3700
Psest_3701: Psest_3701 - 3-oxoacyl-(acyl-carrier-protein) synthase, at 3,865,383 to 3,866,576
_3701
Position (kb)
3863
3864
3865 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3862.659 kb on + strand, within Psest_3698 at 3862.718 kb on + strand, within Psest_3698 at 3862.718 kb on + strand, within Psest_3698 at 3862.820 kb on + strand, within Psest_3698 at 3863.393 kb on + strand, within Psest_3698 at 3863.928 kb on + strand, within Psest_3699 at 3863.928 kb on + strand, within Psest_3699 at 3863.928 kb on + strand, within Psest_3699 at 3863.929 kb on - strand, within Psest_3699 at 3863.929 kb on - strand, within Psest_3699 at 3863.929 kb on - strand, within Psest_3699 at 3864.001 kb on - strand, within Psest_3699 at 3864.665 kb on + strand, within Psest_3699 at 3864.678 kb on + strand, within Psest_3699 at 3864.678 kb on + strand, within Psest_3699 at 3864.678 kb on + strand, within Psest_3699 at 3864.678 kb on + strand, within Psest_3699 at 3864.678 kb on + strand, within Psest_3699 at 3864.679 kb on - strand, within Psest_3699 at 3864.679 kb on - strand, within Psest_3699 at 3864.679 kb on - strand, within Psest_3699 at 3864.679 kb on - strand, within Psest_3699 at 3864.679 kb on - strand, within Psest_3699 at 3864.679 kb on - strand, within Psest_3699 at 3864.694 kb on - strand, within Psest_3699 at 3864.720 kb on + strand, within Psest_3699 at 3864.720 kb on + strand, within Psest_3699 at 3864.723 kb on + strand, within Psest_3699 at 3864.723 kb on + strand, within Psest_3699 at 3864.724 kb on - strand, within Psest_3699 at 3864.802 kb on - strand at 3864.802 kb on - strand at 3865.295 kb on - strand, within Psest_3700 at 3865.343 kb on - strand at 3865.343 kb on - strand at 3865.392 kb on + strand at 3865.689 kb on - strand, within Psest_3701 at 3865.834 kb on - strand, within Psest_3701 at 3865.834 kb on - strand, within Psest_3701
Per-strain Table
Position Strand Gene LocusTag Fraction Def sodium fluoride 25 mM remove 3,862,659 + Psest_3698 0.59 +0.5 3,862,718 + Psest_3698 0.61 +3.1 3,862,718 + Psest_3698 0.61 -0.9 3,862,820 + Psest_3698 0.65 +1.1 3,863,393 + Psest_3698 0.90 +0.7 3,863,928 + Psest_3699 0.25 +0.4 3,863,928 + Psest_3699 0.25 +1.7 3,863,928 + Psest_3699 0.25 +1.5 3,863,929 - Psest_3699 0.25 +1.7 3,863,929 - Psest_3699 0.25 +0.8 3,863,929 - Psest_3699 0.25 -1.5 3,864,001 - Psest_3699 0.31 +2.3 3,864,665 + Psest_3699 0.84 +2.1 3,864,678 + Psest_3699 0.85 +2.4 3,864,678 + Psest_3699 0.85 -0.5 3,864,678 + Psest_3699 0.85 +0.3 3,864,678 + Psest_3699 0.85 +2.7 3,864,678 + Psest_3699 0.85 +1.1 3,864,679 - Psest_3699 0.85 +1.4 3,864,679 - Psest_3699 0.85 +0.7 3,864,679 - Psest_3699 0.85 +2.4 3,864,679 - Psest_3699 0.85 -1.7 3,864,679 - Psest_3699 0.85 +0.1 3,864,679 - Psest_3699 0.85 +0.9 3,864,694 - Psest_3699 0.86 -1.2 3,864,720 + Psest_3699 0.88 +0.1 3,864,720 + Psest_3699 0.88 +1.1 3,864,723 + Psest_3699 0.88 +0.1 3,864,723 + Psest_3699 0.88 +1.5 3,864,724 - Psest_3699 0.88 +0.1 3,864,802 - -2.1 3,864,802 - -0.7 3,865,295 - Psest_3700 0.82 -0.5 3,865,343 - +1.1 3,865,343 - +0.1 3,865,392 + +1.1 3,865,689 - Psest_3701 0.26 +0.1 3,865,834 - Psest_3701 0.38 -1.7 3,865,834 - Psest_3701 0.38 -0.8
Or see this region's nucleotide sequence