Experiment: Def sodium fluoride 25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3474 and Psest_3475 overlap by 4 nucleotides Psest_3475 and Psest_3476 are separated by 50 nucleotides Psest_3476 and Psest_3477 overlap by 7 nucleotides
Psest_3474: Psest_3474 - Short-chain dehydrogenases of various substrate specificities, at 3,643,886 to 3,644,719
_3474
Psest_3475: Psest_3475 - hypothetical protein, at 3,644,716 to 3,645,366
_3475
Psest_3476: Psest_3476 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 3,645,417 to 3,646,076
_3476
Psest_3477: Psest_3477 - Signal transduction histidine kinase, at 3,646,070 to 3,647,509
_3477
Position (kb)
3645
3646
3647 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3644.586 kb on + strand, within Psest_3474 at 3644.839 kb on + strand, within Psest_3475 at 3644.840 kb on - strand, within Psest_3475 at 3644.840 kb on - strand, within Psest_3475 at 3644.840 kb on - strand, within Psest_3475 at 3644.840 kb on - strand, within Psest_3475 at 3644.937 kb on + strand, within Psest_3475 at 3644.938 kb on - strand, within Psest_3475 at 3645.074 kb on - strand, within Psest_3475 at 3645.075 kb on + strand, within Psest_3475 at 3645.094 kb on + strand, within Psest_3475 at 3645.095 kb on - strand, within Psest_3475 at 3645.095 kb on - strand, within Psest_3475 at 3645.095 kb on - strand, within Psest_3475 at 3645.199 kb on + strand, within Psest_3475 at 3645.199 kb on + strand, within Psest_3475 at 3645.199 kb on + strand, within Psest_3475 at 3645.199 kb on + strand, within Psest_3475 at 3645.199 kb on + strand, within Psest_3475 at 3645.199 kb on + strand, within Psest_3475 at 3645.199 kb on + strand, within Psest_3475 at 3645.200 kb on - strand, within Psest_3475 at 3645.200 kb on - strand, within Psest_3475 at 3645.236 kb on - strand, within Psest_3475 at 3645.844 kb on - strand, within Psest_3476 at 3645.951 kb on + strand, within Psest_3476 at 3646.334 kb on + strand, within Psest_3477 at 3646.361 kb on + strand, within Psest_3477 at 3646.361 kb on + strand, within Psest_3477 at 3646.361 kb on + strand, within Psest_3477 at 3646.362 kb on - strand, within Psest_3477 at 3646.362 kb on - strand, within Psest_3477
Per-strain Table
Position Strand Gene LocusTag Fraction Def sodium fluoride 25 mM remove 3,644,586 + Psest_3474 0.84 +1.3 3,644,839 + Psest_3475 0.19 -0.6 3,644,840 - Psest_3475 0.19 -0.6 3,644,840 - Psest_3475 0.19 -0.8 3,644,840 - Psest_3475 0.19 +0.7 3,644,840 - Psest_3475 0.19 -1.3 3,644,937 + Psest_3475 0.34 -0.1 3,644,938 - Psest_3475 0.34 +1.2 3,645,074 - Psest_3475 0.55 +1.0 3,645,075 + Psest_3475 0.55 -0.5 3,645,094 + Psest_3475 0.58 +0.4 3,645,095 - Psest_3475 0.58 +0.7 3,645,095 - Psest_3475 0.58 -0.2 3,645,095 - Psest_3475 0.58 +1.7 3,645,199 + Psest_3475 0.74 +0.3 3,645,199 + Psest_3475 0.74 +1.0 3,645,199 + Psest_3475 0.74 -0.9 3,645,199 + Psest_3475 0.74 -0.0 3,645,199 + Psest_3475 0.74 -0.0 3,645,199 + Psest_3475 0.74 -2.0 3,645,199 + Psest_3475 0.74 +0.7 3,645,200 - Psest_3475 0.74 +1.0 3,645,200 - Psest_3475 0.74 -1.3 3,645,236 - Psest_3475 0.80 -1.2 3,645,844 - Psest_3476 0.65 -0.4 3,645,951 + Psest_3476 0.81 +1.1 3,646,334 + Psest_3477 0.18 +0.4 3,646,361 + Psest_3477 0.20 -0.0 3,646,361 + Psest_3477 0.20 -1.3 3,646,361 + Psest_3477 0.20 +3.0 3,646,362 - Psest_3477 0.20 -0.1 3,646,362 - Psest_3477 0.20 +0.4
Or see this region's nucleotide sequence