Experiment: Def sodium fluoride 25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3305 and Psest_3306 overlap by 1 nucleotides Psest_3306 and Psest_3307 overlap by 8 nucleotides Psest_3307 and Psest_3308 are separated by 281 nucleotides
Psest_3305: Psest_3305 - ABC-type transport system involved in resistance to organic solvents, periplasmic component, at 3,470,863 to 3,471,321
_3305
Psest_3306: Psest_3306 - conserved hypothetical integral membrane protein, at 3,471,321 to 3,472,118
_3306
Psest_3307: Psest_3307 - ABC-type transport system involved in resistance to organic solvents, ATPase component, at 3,472,111 to 3,472,926
_3307
Psest_3308: Psest_3308 - KpsF/GutQ family protein, at 3,473,208 to 3,474,182
_3308
Position (kb)
3472
3473 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3471.192 kb on - strand, within Psest_3305 at 3471.197 kb on + strand, within Psest_3305 at 3471.197 kb on + strand, within Psest_3305 at 3471.197 kb on + strand, within Psest_3305 at 3471.198 kb on - strand, within Psest_3305 at 3471.206 kb on + strand, within Psest_3305 at 3471.207 kb on - strand, within Psest_3305 at 3471.207 kb on - strand, within Psest_3305 at 3471.207 kb on - strand, within Psest_3305 at 3471.385 kb on + strand at 3471.385 kb on + strand at 3471.385 kb on + strand at 3471.385 kb on + strand at 3471.385 kb on + strand at 3471.385 kb on + strand at 3471.416 kb on + strand, within Psest_3306 at 3471.416 kb on + strand, within Psest_3306 at 3471.565 kb on + strand, within Psest_3306 at 3471.615 kb on + strand, within Psest_3306 at 3471.615 kb on + strand, within Psest_3306 at 3471.682 kb on + strand, within Psest_3306 at 3471.682 kb on + strand, within Psest_3306 at 3471.682 kb on + strand, within Psest_3306 at 3471.682 kb on + strand, within Psest_3306 at 3471.682 kb on + strand, within Psest_3306 at 3471.682 kb on + strand, within Psest_3306 at 3471.682 kb on + strand, within Psest_3306 at 3471.883 kb on + strand, within Psest_3306 at 3472.112 kb on + strand at 3472.280 kb on + strand, within Psest_3307 at 3472.280 kb on + strand, within Psest_3307 at 3472.280 kb on + strand, within Psest_3307 at 3472.280 kb on + strand, within Psest_3307 at 3472.280 kb on + strand, within Psest_3307 at 3472.280 kb on + strand, within Psest_3307 at 3472.280 kb on + strand, within Psest_3307 at 3472.280 kb on + strand, within Psest_3307 at 3472.280 kb on + strand, within Psest_3307 at 3472.280 kb on + strand, within Psest_3307 at 3472.280 kb on + strand, within Psest_3307 at 3472.280 kb on + strand, within Psest_3307 at 3472.280 kb on + strand, within Psest_3307 at 3472.280 kb on + strand, within Psest_3307 at 3472.280 kb on + strand, within Psest_3307 at 3472.280 kb on + strand, within Psest_3307 at 3472.280 kb on + strand, within Psest_3307 at 3472.286 kb on + strand, within Psest_3307 at 3472.286 kb on + strand, within Psest_3307 at 3472.286 kb on + strand, within Psest_3307 at 3472.286 kb on + strand, within Psest_3307 at 3472.286 kb on + strand, within Psest_3307 at 3472.332 kb on + strand, within Psest_3307 at 3472.424 kb on + strand, within Psest_3307 at 3472.424 kb on + strand, within Psest_3307 at 3472.428 kb on + strand, within Psest_3307 at 3472.428 kb on + strand, within Psest_3307 at 3472.428 kb on + strand, within Psest_3307 at 3472.852 kb on - strand at 3472.860 kb on + strand at 3472.861 kb on - strand at 3472.861 kb on - strand at 3472.861 kb on - strand at 3472.907 kb on + strand at 3473.012 kb on + strand at 3473.012 kb on + strand at 3473.013 kb on - strand at 3473.014 kb on + strand at 3473.014 kb on + strand at 3473.014 kb on + strand at 3473.014 kb on + strand at 3473.014 kb on + strand at 3473.014 kb on + strand at 3473.014 kb on + strand at 3473.015 kb on - strand at 3473.015 kb on - strand at 3473.015 kb on - strand at 3473.172 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Def sodium fluoride 25 mM remove 3,471,192 - Psest_3305 0.72 +0.7 3,471,197 + Psest_3305 0.73 -1.9 3,471,197 + Psest_3305 0.73 +2.4 3,471,197 + Psest_3305 0.73 +0.1 3,471,198 - Psest_3305 0.73 -0.0 3,471,206 + Psest_3305 0.75 -0.7 3,471,207 - Psest_3305 0.75 +0.5 3,471,207 - Psest_3305 0.75 +0.1 3,471,207 - Psest_3305 0.75 +0.0 3,471,385 + +1.0 3,471,385 + +0.5 3,471,385 + -0.5 3,471,385 + +0.3 3,471,385 + +0.8 3,471,385 + +0.2 3,471,416 + Psest_3306 0.12 +0.6 3,471,416 + Psest_3306 0.12 -1.1 3,471,565 + Psest_3306 0.31 +1.3 3,471,615 + Psest_3306 0.37 +0.5 3,471,615 + Psest_3306 0.37 +0.3 3,471,682 + Psest_3306 0.45 +1.0 3,471,682 + Psest_3306 0.45 -0.2 3,471,682 + Psest_3306 0.45 +3.0 3,471,682 + Psest_3306 0.45 +0.7 3,471,682 + Psest_3306 0.45 +1.6 3,471,682 + Psest_3306 0.45 -0.3 3,471,682 + Psest_3306 0.45 +1.3 3,471,883 + Psest_3306 0.70 +0.6 3,472,112 + +0.4 3,472,280 + Psest_3307 0.21 +1.7 3,472,280 + Psest_3307 0.21 -1.0 3,472,280 + Psest_3307 0.21 -0.9 3,472,280 + Psest_3307 0.21 +0.5 3,472,280 + Psest_3307 0.21 +1.1 3,472,280 + Psest_3307 0.21 -0.6 3,472,280 + Psest_3307 0.21 +1.4 3,472,280 + Psest_3307 0.21 +0.4 3,472,280 + Psest_3307 0.21 +1.0 3,472,280 + Psest_3307 0.21 -1.0 3,472,280 + Psest_3307 0.21 +0.7 3,472,280 + Psest_3307 0.21 -0.1 3,472,280 + Psest_3307 0.21 -0.5 3,472,280 + Psest_3307 0.21 +0.8 3,472,280 + Psest_3307 0.21 -0.4 3,472,280 + Psest_3307 0.21 +1.3 3,472,280 + Psest_3307 0.21 -0.3 3,472,286 + Psest_3307 0.21 +2.1 3,472,286 + Psest_3307 0.21 +0.3 3,472,286 + Psest_3307 0.21 +1.0 3,472,286 + Psest_3307 0.21 +0.7 3,472,286 + Psest_3307 0.21 +0.3 3,472,332 + Psest_3307 0.27 +1.8 3,472,424 + Psest_3307 0.38 +0.1 3,472,424 + Psest_3307 0.38 +0.7 3,472,428 + Psest_3307 0.39 +0.8 3,472,428 + Psest_3307 0.39 +0.3 3,472,428 + Psest_3307 0.39 +1.7 3,472,852 - +0.7 3,472,860 + +0.0 3,472,861 - +0.7 3,472,861 - +0.2 3,472,861 - -0.5 3,472,907 + +0.2 3,473,012 + +0.8 3,473,012 + +1.0 3,473,013 - -1.6 3,473,014 + +0.2 3,473,014 + +0.9 3,473,014 + +0.0 3,473,014 + +0.6 3,473,014 + +0.8 3,473,014 + +0.3 3,473,014 + +0.3 3,473,015 - -1.2 3,473,015 - +1.0 3,473,015 - +0.4 3,473,172 + +0.4
Or see this region's nucleotide sequence